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Mir138-1 Gene Detail
Summary
  • Symbol
    Mir138-1
  • Name
    microRNA 138-1
  • Synonyms
    Mirn138, Mirn138-1, mmu-mir-138-1
Location &
Maps
more
  • Sequence Map
    Chr9:122511941-122512039 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 73.05 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    78 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2676823
 miRNA gene Chr9:122511941-122512039 (+)
129S1/SvImJ ENSMUSG00200031428
 miRNA gene Chr9:119639565-119639663 (+)
A/J ENSMUSG00195028649
 miRNA gene Chr9:118785552-118785650 (+)
AKR/J ENSMUSG00220019604
 miRNA gene Chr9:119251104-119251202 (+)
BALB/cJ ENSMUSG00180032154
 miRNA gene Chr9:119325396-119325494 (+)
C3H/HeJ ENSMUSG00175019155
 miRNA gene Chr9:119561754-119561852 (+)
C57BL/6NJ ENSMUSG00215033871
 miRNA gene Chr9:119474681-119474779 (+)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005016945
 miRNA gene Chr9:119147575-119147673 (+)
CBA/J ENSMUSG00210041965
 miRNA gene Chr9:119284633-119284731 (+)
DBA/2J ENSMUSG00185016994
 miRNA gene Chr9:119620281-119620379 (+)
FVB/NJ ENSMUSG00205035640
 miRNA gene Chr9:119452139-119452237 (+)
JF1/MsJ ENSUMUG00000050204
 miRNA gene Chr9:119418888-119418986 (+)
LP/J ENSMUSG00230038432
 miRNA gene Chr9:119779733-119779831 (+)
NOD/ShiLtJ ENSMUSG00190015120
 miRNA gene Chr9:119228439-119228537 (+)
NZO/HlLtJ ENSMUSG00225023965
 miRNA gene Chr9:120040031-120040129 (+)
PWK/PhJ ENSLUMG00010039227
 miRNA gene Chr9:119305027-119305125 (+)
SPRET/EiJ ENSMSPG00010025228
 miRNA gene Chr9:121015562-121015660 (+)
WSB/EiJ ENSIUOG00005023214
 miRNA gene Chr9:118652509-118652607 (+)



Homology
more
  • Human Ortholog
    MIR138-1, microRNA 138-1
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MIR138-1, microRNA 138-1
  • Synonyms
    mir-138-1, MIRN138-1
  • Links
    NCBI Gene ID: 406929

  • Chr Location
    chr3:44114212-44114310 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    4 phenotype references
Mice homozygous for a targeted deletion are viable with no observed pathologies.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    650
  • Tissues
    13
  • Literature Summary
    10
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 387156 NCBI Gene Model | MGI Sequence Detail 99 C57BL/6J ±  kb
transcript NR_029819 RefSeq | MGI Sequence Detail 99 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    Primer pair 1
    Other 2
Other Database
Links
less
miRBase MI0000722
References
more
  • Summaries
    All 28
    Developmental Gene Expression 10
    Gene Ontology 5
    Phenotypes 4
  • Earliest
    J:84907 Lagos-Quintana M, et al., Identification of tissue-specific microRNAs from mouse. Curr Biol. 2002 Apr 30;12(9):735-9
  • Latest
    J:318524 Bai XZ, et al., MicroRNA-138 Aggravates Inflammatory Responses of Macrophages by Targeting SIRT1 and Regulating the NF-kappaB and AKT Pathways. Cell Physiol Biochem. 2018;49(2):489-500
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory