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Mir124a-1 Gene Detail
Summary
  • Symbol
    Mir124a-1
  • Name
    microRNA 124a-1
  • Synonyms
    Mirn124a, Mirn124a-1, mmu-mir-124-1, mmu-mir-124a-1
Location &
Maps
more
  • Sequence Map
    Chr14:64828106-64828190 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 33.77 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    43 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2676807
 miRNA gene Chr14:64828106-64828190 (+)
129S1/SvImJ ENSMUSG00200030654
 miRNA gene Chr14:53439409-53439493 (+)
A/J ENSMUSG00195015955
 miRNA gene Chr14:53613953-53614037 (+)
AKR/J ENSMUSG00220033622
 miRNA gene Chr14:52954462-52954546 (+)
BALB/cJ ENSMUSG00180036040
 miRNA gene Chr14:53230080-53230164 (+)
C3H/HeJ ENSMUSG00175038986
 miRNA gene Chr14:54975750-54975834 (+)
C57BL/6NJ ENSMUSG00215029702
 miRNA gene Chr14:53160813-53160897 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0007382
 miRNA gene Chr14:55740556-55740640 (+)
CAST/EiJ ENSTCUG00005039286
 miRNA gene Chr14:54875797-54875881 (+)
CBA/J ENSMUSG00210042289
 miRNA gene Chr14:53601386-53601470 (+)
DBA/2J ENSMUSG00185032550
 miRNA gene Chr14:58773615-58773699 (+)
FVB/NJ ENSMUSG00205039939
 miRNA gene Chr14:53116792-53116876 (+)
JF1/MsJ ENSUMUG00000047033
 miRNA gene Chr14:69946086-69946170 (+)
LP/J ENSMUSG00230037543
 miRNA gene Chr14:70802985-70803069 (+)
NOD/ShiLtJ ENSMUSG00190043356
 miRNA gene Chr14:53396108-53396192 (+)
NZO/HlLtJ ENSMUSG00225046579
 miRNA gene Chr14:61129088-61129172 (+)
PWK/PhJ ENSLUMG00010039666
 miRNA gene Chr14:52834486-52834570 (+)
SPRET/EiJ ENSMSPG00010033964
 miRNA gene Chr14:56310727-56310811 (+)
WSB/EiJ ENSIUOG00005042573
 miRNA gene Chr14:52833723-52833807 (+)



Homology
more
  • Human Ortholog
    MIR124-1, microRNA 124-1
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MIR124-1, microRNA 124-1
  • Synonyms
    mir-124-1, MIR124A, MIR124A1, MIRN124-1, MIRN124A1
  • Links
    NCBI Gene ID: 406907

  • Chr Location
    chr8:9903388-9903472 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    13 phenotypes from 2 alleles in 2 genetic backgrounds
    2 phenotypes from multigenic genotypes
    7 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a targeted mutation exhibit impaired hippocampal axogenesis and retinal cone cell survival.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    26
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    756
  • Tissues
    88
  • Literature Summary
    55
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    • All Sequences
      24
    • RefSeq
      1
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 387233 NCBI Gene Model | MGI Sequence Detail 85 C57BL/6J ±  kb
    transcript NR_029813 RefSeq | MGI Sequence Detail 85 C57BL/6  
    For the selected sequence
    Molecular
    Reagents
    less
    • All nucleic 23
      Primer pair 11
      Other 12
    Other Database
    Links
    less
    miRBase MI0000716
    References
    more
    • Summaries
      All 90
      Developmental Gene Expression 55
      Gene Ontology 6
      Phenotypes 7
    • Earliest
      J:84907 Lagos-Quintana M, et al., Identification of tissue-specific microRNAs from mouse. Curr Biol. 2002 Apr 30;12(9):735-9
    • Latest
      J:382308 Suzuki A, et al., Identification of Genes and microRNAs Associated with Midfacial Hypoplasia in Mice. Cells. 2026 Mar 3;15(5)
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    09/08/2026
    MGI 6.24     		The Jackson Laboratory