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Cdv3 Gene Detail
Summary
  • Symbol
    Cdv3
  • Name
    carnitine deficiency-associated gene expressed in ventricle 3
  • Synonyms
    2510010F10Rik, C230084J24Rik, TPP36
  • Feature Type
    protein coding gene
  • IDs
    MGI:2448759
    NCBI Gene: 321022
  • Alliance
    genome feature page
  • Transcription Start Sites
    12 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:103230301-103243034 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 55.26 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    298 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2448759
 protein coding gene Chr9:103230293-103243039 (-)
129S1/SvImJ ENSMUSG00200016256
 protein coding gene Chr9:100387672-100400379 (-)
A/J ENSMUSG00195015834
 protein coding gene Chr9:99606274-99619015 (-)
AKR/J ENSMUSG00220035048
 protein coding gene Chr9:99998737-100011486 (-)
BALB/cJ ENSMUSG00180023194
 protein coding gene Chr9:99922825-99935569 (-)
C3H/HeJ ENSMUSG00175011595
 protein coding gene Chr9:100265569-100278311 (-)
C57BL/6NJ ENSMUSG00215010060
 protein coding gene Chr9:100267613-100280360 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0032590
 protein coding gene Chr9:98780098-98783497 (-)
CAST/EiJ ENSTCUG00005012657
 protein coding gene Chr9:100061671-100074396 (-)
CBA/J ENSMUSG00210015097
 protein coding gene Chr9:100120305-100133012 (-)
DBA/2J ENSMUSG00185010514
 protein coding gene Chr9:100272861-100285605 (-)
FVB/NJ ENSMUSG00205018113
 protein coding gene Chr9:100275644-100288347 (-)
JF1/MsJ ENSUMUG00000028488
 protein coding gene Chr9:100103237-100116191 (-)
LP/J ENSMUSG00230017279
 protein coding gene Chr9:100421505-100434226 (-)
NOD/ShiLtJ ENSMUSG00190028202
 protein coding gene Chr9:99908571-99921312 (-)
NZO/HlLtJ ENSMUSG00225018455
 protein coding gene Chr9:100640411-100653364 (-)
NZO/HlLtJ ENSMUSG00225023362
 protein coding gene Chr18:88787205-88790428 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    CDV3, CDV3 homolog
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CDV3, CDV3 homolog
  • Synonyms
    H41
  • Links
    NCBI Gene ID: 55573
    UniProt: Q9UKY7

  • Chr Location
    3q22.1; chr3:133573686-133590274 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    12 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    4
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    16
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 321022 NCBI Gene Model | MGI Sequence Detail 12734 C57BL/6J ±  kb
transcript NM_175565 RefSeq | MGI Sequence Detail 3923 C57BL/6  
polypeptide Q4VAA2 UniProt | EBI | MGI Sequence Detail 281 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 17
    cDNA 16
    Primer pair 1

    Microarray probesets 9
Other
Accession IDs
less
MGI:1924257, MGI:2143404
References
more
  • Summaries
    All 39
    Gene Ontology 4
    Phenotypes 12
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory