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Trav7d-6 Gene Detail
Summary
  • Symbol
    Trav7d-6
  • Name
    T cell receptor alpha variable 7D-6
  • Synonyms
    C920008G01Rik
Location &
Maps
more
  • Sequence Map
    Chr14:53257916-53258448 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 27.19 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444626
 gene segment Chr14:53257873-53258448 (+)
129S1/SvImJ ENSMUSG00200044165
 gene segment Chr14:42499198-42499773 (+)
A/J ENSMUSG00195035867
 gene segment Chr14:42293452-42294027 (+)
AKR/J ENSMUSG00220033537
 gene segment Chr14:41557489-41558064 (-)
BALB/cJ ENSMUSG00180051699
 gene segment Chr14:42346792-42347367 (+)
C3H/HeJ ENSMUSG00175051804
 gene segment Chr14:44029242-44029817 (+)
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0002229
 gene segment Chr14:45092602-45093176 (-)
CAST/EiJ ENSTCUG00005049333
 gene segment Chr14:44077562-44078137 (+)
CBA/J ENSMUSG00210046422
 gene segment Chr14:42271612-42272187 (+)
DBA/2J ENSMUSG00185054734
 gene segment Chr14:47772706-47773281 (+)
FVB/NJ ENSMUSG00205041433
 gene segment Chr14:42137544-42138119 (+)
JF1/MsJ ENSUMUG00000051233
 gene segment Chr14:59052612-59053187 (+)
LP/J no annotation
NOD/ShiLtJ ENSMUSG00190052031
 gene segment Chr14:42479130-42479705 (+)
NZO/HlLtJ no annotation
PWK/PhJ ENSLUMG00010052165
 gene segment Chr14:41915486-41916061 (+)
SPRET/EiJ ENSMSPG00010046872
 gene segment Chr14:45340171-45340746 (+)
WSB/EiJ ENSIUOG00005044069
 gene segment Chr14:41655556-41656131 (+)



Homology
more
  • Human Ortholog
    TRAV12-1, T cell receptor alpha variable 12-1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TRAV12-1, T cell receptor alpha variable 12-1
  • Synonyms
    TCRAV12S1, TCRAV2S3, TRAV121
  • Links
    NCBI Gene ID: 28674
    UniProt: A0A0B4J245

  • Chr Location
    14q11.2; chr14:21841240-21841774 (+)  GRCh38
  • Human Ortholog
    TRAV12-2, T cell receptor alpha variable 12-2
  • Synonyms
    TCRAV12S2, TCRAV2S1, TRAV122
  • Links
    NCBI Gene ID: 28673
    UniProt: A0A075B6T6

  • Chr Location
    14q11.2; chr14:21887857-21888502 (+)  GRCh38
  • Human Ortholog
    TRAV12-3, T cell receptor alpha variable 12-3
  • Synonyms
    TCRAV12S3, TCRAV2S2, TRAV123
  • Links
    NCBI Gene ID: 28672
    UniProt: A0A0B4J271

  • Chr Location
    14q11.2; chr14:21965451-21966061 (+)  GRCh38
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    633
  • Tissues
    7
  • cDNA Data
    4
  • Literature Summary
    1
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 320734 NCBI Gene Model | MGI Sequence Detail 533 C57BL/6J ±  kb
transcript AK050592 GenBank | ENA | DDBJ | MGI Sequence Detail 1442 C57BL/6J  
polypeptide A0A0B4J1N1 UniProt | EBI | MGI Sequence Detail 112 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR013106 Immunoglobulin V-set domain
    IPR051006 T cell receptor variable domain
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 2
Other
Accession IDs
less
MGI:6331097
References
more
  • Summaries
    All 13
    Developmental Gene Expression 1
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory