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Samd12 Gene Detail
Summary
  • Symbol
    Samd12
  • Name
    sterile alpha motif domain containing 12
  • Synonyms
    A830094I09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444518
    NCBI Gene: 320679
  • Alliance
    genome feature page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:53317206-53765933 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 21.10 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    12387 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444518
 protein coding gene Chr15:53262514-53765933 (-)
129S1/SvImJ ENSMUSG00200019291
 protein coding gene Chr15:50299980-50758595 (-)
A/J ENSMUSG00195005490
 protein coding gene Chr15:50328737-50793744 (-)
AKR/J ENSMUSG00220018057
 protein coding gene Chr15:50336535-50789085 (-)
BALB/cJ ENSMUSG00180004558
 protein coding gene Chr15:50282217-50731047 (-)
C3H/HeJ ENSMUSG00175020469
 protein coding gene Chr15:50540808-50989634 (-)
C57BL/6NJ ENSMUSG00215003172
 protein coding gene Chr15:50280221-50729033 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0019787
 protein coding gene Chr15:47708354-48140010 (-)
CAST/EiJ ENSTCUG00005013774
 protein coding gene Chr15:50173224-50628175 (-)
CBA/J ENSMUSG00210026373
 protein coding gene Chr15:50363176-50811980 (-)
DBA/2J ENSMUSG00185013027
 protein coding gene Chr15:50337500-50802436 (-)
FVB/NJ ENSMUSG00205011801
 protein coding gene Chr15:50152926-50615767 (-)
JF1/MsJ ENSUMUG00000018700
 protein coding gene Chr15:50172670-50614994 (-)
LP/J ENSMUSG00230005832
 protein coding gene Chr15:53661502-54120124 (-)
NOD/ShiLtJ ENSMUSG00190008317
 protein coding gene Chr15:50330340-50779137 (-)
NZO/HlLtJ ENSMUSG00225028211
 protein coding gene Chr15:53987869-54436659 (-)
PWK/PhJ ENSLUMG00010012260
 protein coding gene Chr15:50394142-50867810 (-)
SPRET/EiJ ENSMSPG00010006698
 protein coding gene Chr15:51442004-51916564 (-)
WSB/EiJ ENSIUOG00005020857
 protein coding gene Chr15:50369474-50819477 (-)



Homology
more
  • Human Ortholog
    SAMD12, sterile alpha motif domain containing 12
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SAMD12, sterile alpha motif domain containing 12
  • Synonyms
    BAFME, BAFME1, FAME, FAME1, FCMTE1, MEBA
  • Links
    NCBI Gene ID: 401474
    UniProt: Q8N8I0

  • Chr Location
    8q24.11-q24.12; chr8:118131825-118622112 (-)  GRCh38
Human Diseases
more
  • Diseases
    1 with human SAMD12 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    17 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    7
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000058656 Ensembl Gene Model | MGI Sequence Detail 448728 C57BL/6J ±  kb
transcript ENSMUST00000078673 Ensembl | MGI Sequence Detail 9019 Not Applicable  
polypeptide ENSMUSP00000077741 Ensembl | MGI Sequence Detail 161 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 1
References
more
  • Summaries
    All 32
    Diseases 1
    Gene Ontology 1
    Phenotypes 17
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:155838 Katayama K, et al., Characterization of the chromosomal inversion associated with the Koa mutation in the mouse revealed the cause of skeletal abnormalities. BMC Genet. 2009;10:60
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory