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Fam78a Gene Detail
Summary
  • Symbol
    Fam78a
  • Name
    family with sequence similarity 78, member A
  • Synonyms
    A130092J06Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443569
    NCBI Gene: 241303
  • Alliance
    genome feature page
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:31940067-31974869 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 22.00 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    835 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443569
 protein coding gene Chr2:31932720-31977484 (-)
129S1/SvImJ ENSMUSG00200050925
 protein coding gene Chr2:28912259-28946873 (-)
A/J ENSMUSG00195047150
 protein coding gene Chr2:29013621-29048244 (-)
AKR/J ENSMUSG00220053206
 protein coding gene Chr2:29131543-29166163 (-)
BALB/cJ ENSMUSG00180053442
 protein coding gene Chr2:29028276-29062893 (-)
C3H/HeJ ENSMUSG00175049144
 protein coding gene Chr2:28994703-29029317 (-)
C57BL/6NJ ENSMUSG00215044474
 protein coding gene Chr2:29060214-29094832 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023422
 protein coding gene Chr2:27927676-27962747 (-)
CAST/EiJ ENSTCUG00005052396
 protein coding gene Chr2:28741420-28776079 (-)
CBA/J ENSMUSG00210015321
 protein coding gene Chr2:29067272-29101887 (-)
DBA/2J ENSMUSG00185047041
 protein coding gene Chr2:28926906-28961528 (-)
FVB/NJ ENSMUSG00205045569
 protein coding gene Chr2:28773596-28808219 (-)
JF1/MsJ ENSUMUG00000035104
 protein coding gene Chr2:28822937-28859420 (-)
LP/J ENSMUSG00230041342
 protein coding gene Chr2:30847820-30882433 (-)
NOD/ShiLtJ ENSMUSG00190048178
 protein coding gene Chr2:29028076-29062695 (-)
NZO/HlLtJ ENSMUSG00225007565
 protein coding gene Chr2:38605155-38639784 (-)
PWK/PhJ ENSLUMG00010050433
 protein coding gene Chr2:28910310-28946821 (-)
SPRET/EiJ ENSMSPG00010035700
 protein coding gene Chr2:29635137-29651934 (-)
WSB/EiJ ENSIUOG00005049171
 protein coding gene Chr2:28876528-28911133 (-)



Homology
more
  • Human Ortholog
    FAM78A, family with sequence similarity 78 member A
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    FAM78A, family with sequence similarity 78 member A
  • Synonyms
    C9orf59
  • Links
    NCBI Gene ID: 286336
    UniProt: Q5JUQ0

  • Chr Location
    9q34.13; chr9:131258076-131281045 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    601
  • Tissues
    1
  • cDNA Data
    10
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000050592 Ensembl Gene Model | MGI Sequence Detail 34803 C57BL/6J ±  kb
transcript ENSMUST00000056406 Ensembl | MGI Sequence Detail 4107 Not Applicable  
polypeptide ENSMUSP00000052826 Ensembl | MGI Sequence Detail 283 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 2
References
more
  • Summaries
    All 20
    Developmental Gene Expression 1
    Phenotypes 3
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory