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Ginm1 Gene Detail
Summary
  • Symbol
    Ginm1
  • Name
    glycoprotein integral membrane 1
  • Synonyms
    BC013529, MGC:19209
  • Feature Type
    protein coding gene
  • IDs
    MGI:2384905
    NCBI Gene: 215751
  • Alliance
    genome feature page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:7643711-7656681 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 2.35 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    491 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2384905
 protein coding gene Chr10:7643711-7668588 (-)
129S1/SvImJ ENSMUSG00200008827
 protein coding gene Chr10:4639024-4652062 (-)
A/J ENSMUSG00195008775
 protein coding gene Chr10:4527757-4540799 (-)
AKR/J ENSMUSG00220007168
 protein coding gene Chr10:4646073-4659113 (-)
BALB/cJ ENSMUSG00180021074
 protein coding gene Chr10:4689847-4702885 (-)
C3H/HeJ ENSMUSG00175012305
 protein coding gene Chr10:4678445-4691558 (-)
C57BL/6NJ ENSMUSG00215005041
 protein coding gene Chr10:4581926-4594897 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0015102
 protein coding gene Chr10:4340135-4363921 (-)
CAST/EiJ ENSTCUG00005017002
 protein coding gene Chr10:4650383-4663462 (-)
CBA/J ENSMUSG00210012360
 protein coding gene Chr10:4624122-4637223 (-)
DBA/2J ENSMUSG00185009427
 protein coding gene Chr10:4670598-4683711 (-)
FVB/NJ ENSMUSG00205008439
 protein coding gene Chr10:4623606-4636720 (-)
JF1/MsJ ENSUMUG00000027993
 protein coding gene Chr10:4758032-4771038 (-)
LP/J ENSMUSG00230016016
 protein coding gene Chr10:6288774-6301812 (-)
NOD/ShiLtJ ENSMUSG00190023489
 protein coding gene Chr10:4615664-4628777 (-)
NZO/HlLtJ ENSMUSG00225016003
 protein coding gene Chr10:10808607-10821688 (-)
PWK/PhJ ENSLUMG00010020144
 protein coding gene Chr10:4489999-4503179 (-)
SPRET/EiJ ENSMSPG00010006340
 protein coding gene Chr10:4847758-4860631 (-)
WSB/EiJ ENSIUOG00005013325
 protein coding gene Chr10:4552915-4565953 (-)



Homology
more
  • Human Ortholog
    GINM1, glycosylated integral membrane protein 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    GINM1, glycosylated integral membrane protein 1
  • Synonyms
    C6orf72
  • Links
    NCBI Gene ID: 116254
    UniProt: Q9NU53

  • Chr Location
    6q25.1; chr6:149566206-149591748 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotypes from 1 allele in 1 genetic background
    8 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    643
  • Tissues
    35
  • cDNA Data
    67
  • Literature Summary
    1
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 215751 NCBI Gene Model | MGI Sequence Detail 12971 C57BL/6J ±  kb
    transcript NM_001346750 RefSeq | MGI Sequence Detail 1560 C57BL/6  
    polypeptide Q91WR6 UniProt | EBI | MGI Sequence Detail 327 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      4 Sequences
    • Protein Ontology
      PR:000032268 glycoprotein integral membrane protein 1
      (term hierarchy)
    • InterPro Domains
      IPR042319 Glycoprotein integral membrane protein 1
      IPR060606 Glycoprotein integral membrane protein 1, C-terminal domain
      IPR060605 Glycoprotein integral membrane protein 1, N-terminal domain
    • GlyGen
      Q91WR6 3 sites, 1 N-linked glycan (1 site)
    Molecular
    Reagents
    less
    • All nucleic 67
      cDNA 67

      Microarray probesets 4
    Other
    Accession IDs
    less
    MGI:2143501
    References
    more
    • Summaries
      All 34
      Developmental Gene Expression 1
      Gene Ontology 1
      Phenotypes 8
    • Earliest
      J:82808 Strausberg RL, et al., Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    09/08/2026
    MGI 6.24     		The Jackson Laboratory