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Casd1 Gene Detail
Summary
  • Symbol
    Casd1
  • Name
    CAS1 domain containing 1
  • Synonyms
    Cast1, MGC:6840
  • Feature Type
    protein coding gene
  • IDs
    MGI:2384865
    NCBI Gene: 213819
  • Alliance
    genome feature page
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:4600911-4643355 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 1.81 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    959 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2384865
 protein coding gene Chr6:4600839-4643355 (+)
129S1/SvImJ ENSMUSG00200001689
 protein coding gene Chr6:1673817-1716250 (+)
A/J ENSMUSG00195001869
 protein coding gene Chr6:1555036-1597472 (+)
AKR/J ENSMUSG00220020682
 protein coding gene Chr6:1461141-1503584 (+)
BALB/cJ ENSMUSG00180001390
 protein coding gene Chr6:1690624-1733059 (+)
C3H/HeJ ENSMUSG00175006876
 protein coding gene Chr6:1519173-1561605 (+)
C57BL/6NJ ENSMUSG00215011926
 protein coding gene Chr6:1651426-1693942 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0028076
 protein coding gene Chr6:1078924-1123246 (+)
CAST/EiJ ENSTCUG00005025418
 protein coding gene Chr6:1546370-1588474 (+)
CBA/J ENSMUSG00210021173
 protein coding gene Chr6:1456243-1498678 (+)
DBA/2J ENSMUSG00185024705
 protein coding gene Chr6:1651028-1693435 (+)
FVB/NJ ENSMUSG00205012397
 protein coding gene Chr6:1646357-1688791 (+)
JF1/MsJ ENSUMUG00000007844
 protein coding gene Chr6:1661210-1703004 (+)
LP/J ENSMUSG00230015270
 protein coding gene Chr6:2650697-2693130 (+)
NOD/ShiLtJ ENSMUSG00190015353
 protein coding gene Chr6:1376188-1418623 (+)
NZO/HlLtJ ENSMUSG00225017722
 protein coding gene Chr6:4481599-4524023 (+)
PWK/PhJ ENSLUMG00010023155
 protein coding gene Chr6:1450383-1492301 (+)
SPRET/EiJ ENSMSPG00010002353
 protein coding gene Chr6:1333325-1375006 (+)
WSB/EiJ ENSIUOG00005004168
 protein coding gene Chr6:1632084-1674483 (+)



Homology
more
  • Human Ortholog
    CASD1, CAS1 domain sialic acid O acetyltransferase 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CASD1, CAS1 domain sialic acid O acetyltransferase 1
  • Synonyms
    C7orf12, Cas1, Cas1p, NBLA04196, SOAT
  • Links
    NCBI Gene ID: 64921
    UniProt: Q96PB1

  • Chr Location
    7q21.3; chr7:94509219-94634172 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    19
  • GO References
    9
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    619
  • Tissues
    14
  • cDNA Data
    56
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 213819 NCBI Gene Model | MGI Sequence Detail 42445 C57BL/6J ±  kb
transcript NM_145398 RefSeq | MGI Sequence Detail 3889 C57BL/6  
polypeptide Q7TN73 UniProt | EBI | MGI Sequence Detail 797 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 58
    cDNA 56
    Primer pair 2

    Microarray probesets 3
References
more
  • Summaries
    All 37
    Developmental Gene Expression 2
    Gene Ontology 9
    Phenotypes 9
  • Earliest
    J:84436 Ono R, et al., Identification of a large novel imprinted gene cluster on mouse proximal chromosome 6. Genome Res. 2003 Jul;13(7):1696-705
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory