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Galnt5 Gene Detail
Summary
  • Symbol
    Galnt5
  • Name
    polypeptide N-acetylgalactosaminyltransferase 5
  • Synonyms
    ppGaNTase-T5
Location &
Maps
more
  • Sequence Map
    Chr2:57887832-57931039 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 32.93 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1292 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2179403
 protein coding gene Chr2:57887832-57935872 (+)
129S1/SvImJ ENSMUSG00200002293
 protein coding gene Chr2:54962524-55010536 (+)
A/J ENSMUSG00195004915
 protein coding gene Chr2:55082922-55130939 (+)
AKR/J ENSMUSG00220006977
 protein coding gene Chr2:55184933-55232950 (+)
BALB/cJ ENSMUSG00180018332
 protein coding gene Chr2:55027994-55075973 (+)
C3H/HeJ ENSMUSG00175012622
 protein coding gene Chr2:55107954-55155967 (+)
C57BL/6NJ ENSMUSG00215007294
 protein coding gene Chr2:55076614-55124595 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0023568
 protein coding gene Chr2:52928889-52974817 (+)
CAST/EiJ ENSTCUG00005021563
 protein coding gene Chr2:54443376-54488791 (+)
CBA/J ENSMUSG00210031765
 protein coding gene Chr2:55127438-55175452 (+)
DBA/2J ENSMUSG00185007416
 protein coding gene Chr2:54983385-55031380 (+)
FVB/NJ ENSMUSG00205020015
 protein coding gene Chr2:54624028-54672031 (+)
JF1/MsJ ENSUMUG00000014611
 protein coding gene Chr2:54687138-54732506 (+)
LP/J ENSMUSG00230001387
 protein coding gene Chr2:56834881-56882854 (+)
NOD/ShiLtJ ENSMUSG00190042376
 protein coding gene Chr2:55064762-55112779 (+)
NZO/HlLtJ ENSMUSG00225000669
 protein coding gene Chr2:64556663-64602222 (+)
PWK/PhJ ENSLUMG00010005026
 protein coding gene Chr2:54846421-54891934 (+)
SPRET/EiJ ENSMSPG00010011624
 protein coding gene Chr2:55955483-55994385 (+)
WSB/EiJ ENSIUOG00005027723
 protein coding gene Chr2:55058965-55104615 (+)



Homology
more
  • Human Ortholog
    GALNT5, polypeptide N-acetylgalactosaminyltransferase 5
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    GALNT5, polypeptide N-acetylgalactosaminyltransferase 5
  • Synonyms
    GALNAC-T5, GALNACT5
  • Links
    NCBI Gene ID: 11227
    UniProt: Q7Z7M9

  • Chr Location
    2q24.1; chr2:157257578-157318491 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from multigenic genotypes
    5 phenotype references
An unpublished knockout mutation is reported to have no overt phenotypic consequences.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    7
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    782
  • Tissues
    154
  • cDNA Data
    7
  • Literature Summary
    10
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 241391 NCBI Gene Model | MGI Sequence Detail 43208 C57BL/6J ±  kb
transcript NM_172855 RefSeq | MGI Sequence Detail 3247 Not Specified  
polypeptide Q8C102 UniProt | EBI | MGI Sequence Detail 930 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 13
    Genomic 2
    cDNA 7
    Primer pair 4

    Microarray probesets 1
References
more
  • Summaries
    All 34
    Developmental Gene Expression 10
    Gene Ontology 5
    Phenotypes 5
  • Earliest
    J:74107 Kingsley PD, et al., Diverse spatial expression patterns of UDP-GalNAc:polypeptide N-acetylgalactosaminyl-transferase family member mRNAs during mouse development. Glycobiology. 2000 Dec;10(12):1317-23
  • Latest
    J:374040 Dang W, et al., Proximal phalanges of digit 1 have different identities in the forelimbs and hindlimbs of the mouse. Sci Rep. 2025 Oct 27;15(1):37417
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory