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Snord61 Gene Detail
Summary
  • Symbol
    Snord61
  • Name
    small nucleolar RNA, C/D box 61
  • Synonyms
    MBII-342, Rnu61, U61
Location &
Maps
more
  • Sequence Map
    ChrX:56436808-56436869 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 31.66 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    72 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2148805
 snoRNA gene ChrX:56436808-56436879 (-)
129S1/SvImJ ENSMUSG00200038334
 snoRNA gene ChrX:38763620-38763690 (-)
A/J ENSMUSG00195009910
 snoRNA gene ChrX:42198173-42198243 (-)
AKR/J ENSMUSG00220039872
 snoRNA gene ChrX:38089377-38089447 (-)
BALB/cJ ENSMUSG00180036700
 snoRNA gene ChrX:38830452-38830522 (-)
C3H/HeJ ENSMUSG00175043861
 snoRNA gene ChrX:42359715-42359785 (-)
C57BL/6NJ ENSMUSG00215048415
 snoRNA gene ChrX:39022358-39022428 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0036752
 snoRNA gene ChrX:52316093-52316163 (-)
CAST/EiJ ENSTCUG00005020101
 snoRNA gene ChrX:40663212-40663282 (-)
CBA/J ENSMUSG00210042000
 snoRNA gene ChrX:39191776-39191846 (-)
DBA/2J ENSMUSG00185035324
 snoRNA gene ChrX:51510411-51510481 (-)
FVB/NJ ENSMUSG00205031468
 snoRNA gene ChrX:38839189-38839259 (-)
JF1/MsJ ENSUMUG00000029486
 snoRNA gene ChrX:72414439-72414509 (-)
LP/J ENSMUSG00230030099
 snoRNA gene ChrX:58040522-58040592 (-)
NOD/ShiLtJ ENSMUSG00190036590
 snoRNA gene ChrX:38522547-38522617 (-)
NZO/HlLtJ ENSMUSG00225032563
 snoRNA gene ChrX:63281697-63281767 (-)
PWK/PhJ ENSLUMG00010042100
 snoRNA gene ChrX:38364628-38364698 (-)
SPRET/EiJ ENSMSPG00010025660
 snoRNA gene ChrX:40921358-40921428 (-)
WSB/EiJ ENSIUOG00005047718
 snoRNA gene ChrX:39484343-39484413 (-)



Homology
more
  • Human Ortholog
    SNORD61, small nucleolar RNA, C/D box 61
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SNORD61, small nucleolar RNA, C/D box 61
  • Synonyms
    HBII-342, RNU61, U61
  • Links
    NCBI Gene ID: 26787

  • Chr Location
    chrX:136879199-136879271 (-)  GRCh38
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 353374 NCBI Gene Model | MGI Sequence Detail 62 C57BL/6J ±  kb
transcript NR_002903 RefSeq | MGI Sequence Detail 62 Not Specified  
For the selected sequence
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 11
    Gene Ontology 1
  • Earliest
    J:69860 Huttenhofer A, et al., RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse. EMBO J. 2001 Jun 1;20(11):2943-53
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory