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H3c8 Gene Detail
Summary
  • Symbol
    H3c8
  • Name
    H3 clustered histone 8
  • Synonyms
    H3.1-221, Hist1h3g, M32460
  • Feature Type
    protein coding gene
  • IDs
    MGI:2145541
    NCBI Gene: 97908
  • Member of
    Hist1 cluster
  • Alliance
    genome feature page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:23719588-23720079 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 9.77 cM, cytoband A2-A3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    112 from dbSNP Build 142
  • Strain Annotations
    6
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2145541
 protein coding gene Chr13:23719588-23720121 (+)
129S1/SvImJ no annotation
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0018317
 protein coding gene Chr13:19377122-19377667 (+)
CAST/EiJ ENSTCUG00005009987
 protein coding gene Chr13:20502779-20503308 (+)
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
JF1/MsJ ENSUMUG00000010132
 protein coding gene Chr13:20765863-20766392 (+)
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ ENSLUMG00010028602
 protein coding gene Chr13:19664536-19665065 (+)
SPRET/EiJ no annotation
WSB/EiJ ENSIUOG00005031856
 protein coding gene Chr13:19616568-19617097 (+)



Homology
more
  • Human Ortholog
    H3C1, H3 clustered histone 1
  • Vertebrate Orthologs
    12
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    H3C1, H3 clustered histone 1
  • Synonyms
    H3/A, H3FA, HIST1H3A
  • Links
    NCBI Gene ID: 8350
    UniProt: P68431

  • Chr Location
    6p22.2; chr6:26020451-26021487 (+)  GRCh38
  • Human Ortholog
    H3C10, H3 clustered histone 10
  • Synonyms
    H3F1K, H3FK, H3/k, HIST1H3H
  • Links
    NCBI Gene ID: 8357
    UniProt: P68431

  • Chr Location
    6p22.1; chr6:27810051-27811300 (+)  GRCh38
  • Human Ortholog
    H3C11, H3 clustered histone 11
  • Synonyms
    H3.f, H3/f, H3FF, HIST1H3I
  • Links
    NCBI Gene ID: 8354
    UniProt: P68431

  • Chr Location
    6p22.1; chr6:27871845-27872346 (-)  GRCh38
  • Human Ortholog
    H3C12, H3 clustered histone 12
  • Synonyms
    H3FJ, H3/j, HIST1H3J
  • Links
    NCBI Gene ID: 8356
    UniProt: P68431

  • Chr Location
    6p22.1; chr6:27890315-27893106 (-)  GRCh38
  • Human Ortholog
    H3C2, H3 clustered histone 2
  • Synonyms
    H3FL, H3/l, HIST1H3B
  • Links
    NCBI Gene ID: 8358
    UniProt: P68431

  • Chr Location
    6p22.2; chr6:26031589-26032099 (-)  GRCh38
  • Human Ortholog
    H3C3, H3 clustered histone 3
  • Synonyms
    H3.1, H3/c, H3FC, HIST1H3C
  • Links
    NCBI Gene ID: 8352
    UniProt: P68431

  • Chr Location
    6p22.2; chr6:26045384-26045869 (+)  GRCh38
  • Human Ortholog
    H3C4, H3 clustered histone 4
  • Synonyms
    H3/b, H3FB, HIST1H3D
  • Links
    NCBI Gene ID: 8351
    UniProt: P68431

  • Chr Location
    6p22.2; chr6:26195164-26199293 (-)  GRCh38
  • Human Ortholog
    H3C6, H3 clustered histone 6
  • Synonyms
    H3.1, H3/d, H3FD, HIST1H3E
  • Links
    NCBI Gene ID: 8353
    UniProt: P68431

  • Chr Location
    6p22.2; chr6:26224178-26227473 (+)  GRCh38
  • Human Ortholog
    H3C7, H3 clustered histone 7
  • Synonyms
    H3FI, H3/i, HIST1H3F
  • Links
    NCBI Gene ID: 8968
    UniProt: P68431

  • Chr Location
    6p22.2; chr6:26250142-26250635 (-)  GRCh38
  • Human Ortholog
    H3C8, H3 clustered histone 8
  • Synonyms
    H3FH, H3/h, HIST1H3G
  • Links
    NCBI Gene ID: 8355
    UniProt: P68431

  • Chr Location
    6p22.2; chr6:26270918-26271413 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    599
  • Tissues
    1
  • cDNA Data
    2
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 97908 NCBI Gene Model | MGI Sequence Detail 492 C57BL/6J ±  kb
transcript NM_145073 RefSeq | MGI Sequence Detail 492 Not Specified  
polypeptide P68433 UniProt | EBI | MGI Sequence Detail 136 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 4
    Genomic 1
    cDNA 2
    Primer pair 1

    Microarray probesets 2
Other
Accession IDs
less
MGI:6324988
References
more
  • Summaries
    All 43
    Developmental Gene Expression 1
    Phenotypes 8
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:320332 Kujirai T, et al., Transcription through the nucleosome. Curr Opin Struct Biol. 2020 Apr;61:42-49
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory