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Rundc1 Gene Detail
Summary
  • Symbol
    Rundc1
  • Name
    RUN domain containing 1
  • Feature Type
    protein coding gene
  • IDs
    MGI:2144506
    NCBI Gene: 217201
  • Alliance
    genome feature page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:101315910-101326492 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 65.00 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    444 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2144506
 protein coding gene Chr11:101315910-101326499 (+)
129S1/SvImJ ENSMUSG00200051785
 protein coding gene Chr11:98586288-98596879 (+)
A/J ENSMUSG00195051340
 protein coding gene Chr11:98279862-98290454 (+)
AKR/J ENSMUSG00220046581
 protein coding gene Chr11:98516274-98526862 (+)
BALB/cJ ENSMUSG00180047479
 protein coding gene Chr11:98648504-98659092 (+)
C3H/HeJ ENSMUSG00175042212
 protein coding gene Chr11:98559836-98570427 (+)
C57BL/6NJ ENSMUSG00215051683
 protein coding gene Chr11:98135923-98146512 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0017218
 protein coding gene Chr11:97305503-97316455 (+)
CAST/EiJ ENSTCUG00005050316
 protein coding gene Chr11:98057397-98068004 (+)
CBA/J ENSMUSG00210053063
 protein coding gene Chr11:98281745-98292333 (+)
DBA/2J ENSMUSG00185044268
 protein coding gene Chr11:98609693-98620284 (+)
FVB/NJ ENSMUSG00205043076
 protein coding gene Chr11:98466625-98477214 (+)
JF1/MsJ ENSUMUG00000054873
 protein coding gene Chr11:98869381-98879790 (+)
LP/J ENSMUSG00230047480
 protein coding gene Chr11:99662321-99672912 (+)
NOD/ShiLtJ ENSMUSG00190036654
 protein coding gene Chr11:98648252-98658843 (+)
NZO/HlLtJ ENSMUSG00225052006
 protein coding gene Chr11:101698303-101708895 (+)
PWK/PhJ ENSLUMG00010039526
 protein coding gene Chr11:98417486-98427855 (+)
SPRET/EiJ ENSMSPG00010046964
 protein coding gene Chr11:98900848-98910677 (+)
WSB/EiJ ENSIUOG00005044385
 protein coding gene Chr11:98410644-98421226 (+)



Homology
more
  • Human Ortholog
    RUNDC1, RUN domain containing 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RUNDC1, RUN domain containing 1
  • Synonyms
    RUND1
  • Links
    NCBI Gene ID: 146923
    UniProt: Q96C34

  • Chr Location
    17q21.31; chr17:42980552-42995142 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotypes from 2 alleles in 2 genetic backgrounds
    20 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

Biological Process

Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    625
  • Tissues
    28
  • cDNA Data
    49
  • Literature Summary
    2
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 217201 NCBI Gene Model | MGI Sequence Detail 10583 C57BL/6J ±  kb
    transcript NM_172566 RefSeq | MGI Sequence Detail 3230 C57BL/6  
    polypeptide Q0VDN7 UniProt | EBI | MGI Sequence Detail 615 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 49
      cDNA 49

      Microarray probesets 3
    References
    more
    • Summaries
      All 41
      Developmental Gene Expression 2
      Gene Ontology 1
      Phenotypes 20
    • Earliest
      J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
    • Latest
      J:350444 Martinez-Mayer J, et al., Knockout mice with pituitary malformations help identify human cases of hypopituitarism. Genome Med. 2024 May 31;16(1):75
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    09/08/2026
    MGI 6.24     		The Jackson Laboratory