About   Help   FAQ
AI593442 Gene Detail
Summary
  • Symbol
    AI593442
  • Name
    expressed sequence AI593442
  • Feature Type
    protein coding gene
  • IDs
    MGI:2143099
    NCBI Gene: 330941
  • Alliance
    genome feature page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:52584342-52591080 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 29.12 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    140 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2143099
 protein coding gene Chr9:52584332-52593434 (-)
129S1/SvImJ ENSMUSG00200017656
 protein coding gene Chr9:49735653-49742388 (-)
A/J ENSMUSG00195020978
 protein coding gene Chr9:49430435-49437172 (-)
AKR/J ENSMUSG00220039658
 protein coding gene Chr9:49532917-49539656 (-)
BALB/cJ ENSMUSG00180028688
 protein coding gene Chr9:49542357-49549093 (-)
C3H/HeJ ENSMUSG00175012344
 protein coding gene Chr9:49553844-49560580 (-)
C57BL/6NJ ENSMUSG00215034840
 protein coding gene Chr9:49517627-49524365 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0032211
 protein coding gene Chr9:49488493-49494880 (-)
CAST/EiJ ENSTCUG00005013790
 protein coding gene Chr9:49481645-49488396 (-)
CBA/J ENSMUSG00210016098
 protein coding gene Chr9:49636095-49642832 (-)
DBA/2J ENSMUSG00185010458
 protein coding gene Chr9:49673006-49679742 (-)
FVB/NJ ENSMUSG00205022698
 protein coding gene Chr9:49917516-49924247 (-)
JF1/MsJ ENSUMUG00000040379
 protein coding gene Chr9:49737617-49744338 (-)
LP/J ENSMUSG00230037816
 protein coding gene Chr9:49947037-49953772 (-)
NOD/ShiLtJ ENSMUSG00190017851
 protein coding gene Chr9:49745882-49752619 (-)
NZO/HlLtJ ENSMUSG00225042110
 protein coding gene Chr9:49929324-49936063 (-)
PWK/PhJ ENSLUMG00010020882
 protein coding gene Chr9:49684959-49691676 (-)
SPRET/EiJ ENSMSPG00010009923
 protein coding gene Chr9:50568714-50574185 (-)
WSB/EiJ ENSIUOG00005016965
 protein coding gene Chr9:49160228-49166964 (-)



Homology
more
  • Human Ortholog
    C11orf87, chromosome 11 open reading frame 87
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C11orf87, chromosome 11 open reading frame 87
  • Synonyms
    LOH11CR1A, NEURIM1
  • Links
    NCBI Gene ID: 399947
    UniProt: Q6NUJ2

  • Chr Location
    11q22.3; chr11:109422190-109429167 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    4 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    716
  • Tissues
    100
  • cDNA Data
    7
  • Literature Summary
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000078307 Ensembl Gene Model | MGI Sequence Detail 6739 C57BL/6J ±  kb
transcript ENSMUST00000098768 Ensembl | MGI Sequence Detail 5615 Not Applicable  
polypeptide ENSMUSP00000096365 Ensembl | MGI Sequence Detail 199 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 3
References
more
  • Summaries
    All 25
    Developmental Gene Expression 4
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
  • Latest
    J:313619 Bedogni F, et al., Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. Front Mol Neurosci. 2021;14:686034
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory