AI606473 MGI Mouse Gene Detail - MGI:2139767 - expressed sequence AI606473

Sequence Map

Chr3:154036458-154040324 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2139767	lncRNA gene	Chr3:154036458-154040332 (+)
129S1/SvImJ	ENSMUSG00200003850	lncRNA gene	Chr3:151006695-151010127 (+)
A/J	ENSMUSG00195003613	lncRNA gene	Chr3:151123246-151126683 (+)
AKR/J	ENSMUSG00220000460	lncRNA gene	Chr3:149528399-149531830 (+)
BALB/cJ	ENSMUSG00180028287	lncRNA gene	Chr3:150975165-150978598 (+)
C3H/HeJ	ENSMUSG00175019829	lncRNA gene	Chr3:150591742-150595179 (+)
C57BL/6NJ	ENSMUSG00215023457	lncRNA gene	Chr3:151235223-151238656 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013658	unclassified non-coding RNA gene	Chr3:147324377-147327787 (+)
CAST/EiJ	ENSTCUG00005001487	lncRNA gene	Chr3:151654011-151657446 (+)
CBA/J	ENSMUSG00210004693	lncRNA gene	Chr3:151232296-151235729 (+)
DBA/2J	ENSMUSG00185000077	lncRNA gene	Chr3:151861309-151864746 (+)
FVB/NJ	ENSMUSG00205009562	lncRNA gene	Chr3:150162013-150165443 (+)
JF1/MsJ	ENSUMUG00000035727	lncRNA gene	Chr3:150621222-150624647 (+)
LP/J	ENSMUSG00230009794	lncRNA gene	Chr3:153755710-153759140 (+)
NOD/ShiLtJ	ENSMUSG00190004845	lncRNA gene	Chr3:152215391-152218820 (+)
NZO/HlLtJ	ENSMUSG00225006261	lncRNA gene	Chr3:156255912-156259350 (+)
PWK/PhJ	ENSLUMG00010001927	lncRNA gene	Chr3:150545734-150549151 (+)
SPRET/EiJ	ENSMSPG00010000332	lncRNA gene	Chr3:151882425-151885823 (+)
WSB/EiJ	ENSIUOG00005015656	lncRNA gene	Chr3:151325295-151328731 (+)

Vertebrate Orthology Source

Alliance of Genome Resources

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	99686	NCBI Gene Model \| MGI Sequence Detail	3867	C57BL/6J	± kb
	transcript	NR_040387	RefSeq \| MGI Sequence Detail	2164	C57BL/6

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Summaries

All 16

Developmental Gene Expression 4
Earliest

J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Latest

J:241394 Mattiske T, et al., Embryonic forebrain transcriptome of mice with polyalanine expansion mutations in the ARX homeobox gene. Hum Mol Genet. 2016 Dec 15;25(24):5433-5443

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 09/15/2026 MGI 6.29