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Pym1 Gene Detail
Summary
  • Symbol
    Pym1
  • Name
    PYM homolog 1, exon junction complex associated factor
  • Synonyms
    A030010B05Rik, Pym, PYM Protein, Wibg
  • Feature Type
    protein coding gene
  • IDs
    MGI:1925678
    NCBI Gene: 78428
  • Alliance
    genome feature page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:128583758-128602433 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 77.14 cM, cytoband D3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    435 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925678
 protein coding gene Chr10:128579989-128602437 (+)
129S1/SvImJ ENSMUSG00200011600
 protein coding gene Chr10:124941869-124960551 (+)
A/J ENSMUSG00195014089
 protein coding gene Chr10:125405168-125423847 (+)
AKR/J ENSMUSG00220004873
 protein coding gene Chr10:125010117-125028793 (+)
BALB/cJ ENSMUSG00180009203
 protein coding gene Chr10:125396168-125414840 (+)
C3H/HeJ ENSMUSG00175005555
 protein coding gene Chr10:125395371-125414030 (+)
C57BL/6NJ ENSMUSG00215012081
 protein coding gene Chr10:125002259-125020934 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0015953
 protein coding gene Chr10:121112450-121132053 (+)
CAST/EiJ ENSTCUG00005037818
 protein coding gene Chr10:124388190-124406612 (+)
CBA/J ENSMUSG00210007686
 protein coding gene Chr10:125219583-125238244 (+)
DBA/2J ENSMUSG00185024817
 protein coding gene Chr10:125369330-125388004 (+)
FVB/NJ ENSMUSG00205012574
 protein coding gene Chr10:124610761-124629439 (+)
JF1/MsJ ENSUMUG00000034806
 protein coding gene Chr10:126678449-126697369 (+)
LP/J ENSMUSG00230030266
 protein coding gene Chr10:127294872-127313527 (+)
NOD/ShiLtJ ENSMUSG00190014834
 protein coding gene Chr10:125432956-125451627 (+)
NZO/HlLtJ ENSMUSG00225037209
 protein coding gene Chr10:131493901-131512576 (+)
PWK/PhJ ENSLUMG00010009608
 protein coding gene Chr10:125135262-125154197 (+)
SPRET/EiJ ENSMSPG00010026962
 protein coding gene Chr10:127093404-127111616 (+)
WSB/EiJ ENSIUOG00005008459
 protein coding gene Chr10:125016451-125035298 (+)



Homology
more
  • Human Ortholog
    PYM1, PYM1 exon junction complex associated factor
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    PYM1, PYM1 exon junction complex associated factor
  • Synonyms
    PYM, WIBG
  • Links
    NCBI Gene ID: 84305
    UniProt: Q9BRP8

  • Chr Location
    12q13.2; chr12:55901413-55932618 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    30
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    23
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000064030 Ensembl Gene Model | MGI Sequence Detail 18676 C57BL/6J ±  kb
transcript ENSMUST00000163377 Ensembl | MGI Sequence Detail 1158 Not Applicable  
polypeptide ENSMUSP00000129789 Ensembl | MGI Sequence Detail 203 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 23
    cDNA 23

    Microarray probesets 2
References
more
  • Summaries
    All 34
    Gene Ontology 6
    Phenotypes 9
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory