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Lce6a Gene Detail
Summary
  • Symbol
    Lce6a
  • Name
    late cornified envelope 6A
  • Synonyms
    2210420J11Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1925632
    NCBI Gene: 78382
  • Alliance
    genome feature page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:92527388-92528967 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 40.14 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    145 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925632
 protein coding gene Chr3:92512128-92528975 (-)
129S1/SvImJ ENSMUSG00200038144
 protein coding gene Chr3:89315012-89316591 (-)
A/J ENSMUSG00195053013
 protein coding gene Chr3:89324704-89326283 (-)
AKR/J ENSMUSG00220047985
 protein coding gene Chr3:88545504-88547083 (-)
BALB/cJ ENSMUSG00180047729
 protein coding gene Chr3:89489513-89491082 (-)
C3H/HeJ ENSMUSG00175047249
 protein coding gene Chr3:89262516-89264095 (-)
C57BL/6NJ ENSMUSG00215045951
 protein coding gene Chr3:89873889-89875468 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0025273
 protein coding gene Chr3:86774619-86776199 (-)
CAST/EiJ no annotation
CBA/J ENSMUSG00210046327
 protein coding gene Chr3:89377631-89379210 (-)
DBA/2J ENSMUSG00185051710
 protein coding gene Chr3:89579995-89581564 (-)
FVB/NJ ENSMUSG00205046235
 protein coding gene Chr3:88371535-88373114 (-)
JF1/MsJ ENSUMUG00000039357
 protein coding gene Chr3:89125923-89127513 (-)
LP/J ENSMUSG00230026671
 protein coding gene Chr3:91612477-91614056 (-)
NOD/ShiLtJ ENSMUSG00190045873
 protein coding gene Chr3:89699713-89701267 (-)
NZO/HlLtJ ENSMUSG00225009097
 protein coding gene Chr3:94460657-94462226 (-)
PWK/PhJ no annotation
SPRET/EiJ ENSMSPG00010048427
 protein coding gene Chr3:89643612-89644940 (-)
WSB/EiJ ENSIUOG00005044697
 protein coding gene Chr3:89851303-89852877 (-)



Homology
more
  • Human Ortholog
    LCE6A, late cornified envelope 6A
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    LCE6A, late cornified envelope 6A
  • Synonyms
    C1orf44
  • Links
    NCBI Gene ID: 448835
    UniProt: A0A183

  • Chr Location
    1q21.3; chr1:152842856-152843983 (+)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000086848 Ensembl Gene Model | MGI Sequence Detail 1580 C57BL/6J ±  kb
transcript ENSMUST00000170676 Ensembl | MGI Sequence Detail 485 Not Applicable  
polypeptide ENSMUSP00000128725 Ensembl | MGI Sequence Detail 81 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR031716 Late cornified envelope protein 6A
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 1
References
more
  • Summaries
    All 19
    Diseases 1
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory