About   Help   FAQ
Iqcf5 Gene Detail
Summary
  • Symbol
    Iqcf5
  • Name
    IQ motif containing F5
  • Synonyms
    1700007L12Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922720
    NCBI Gene: 75470
  • Alliance
    genome feature page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:106391772-106393202 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 57.68 cM, cytoband F1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    103 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922720
 protein coding gene Chr9:106391772-106393209 (+)
129S1/SvImJ ENSMUSG00200040571
 protein coding gene Chr9:103590783-103592222 (+)
A/J ENSMUSG00195035106
 protein coding gene Chr9:102815777-102817216 (+)
AKR/J ENSMUSG00220021436
 protein coding gene Chr9:103204989-103206434 (+)
BALB/cJ ENSMUSG00180023356
 protein coding gene Chr9:103132264-103133703 (+)
C3H/HeJ ENSMUSG00175035838
 protein coding gene Chr9:103474640-103476079 (+)
C57BL/6NJ ENSMUSG00215022566
 protein coding gene Chr9:103441337-103442774 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0032628
 protein coding gene Chr9:101893445-101894889 (+)
CAST/EiJ ENSTCUG00005024698
 protein coding gene Chr9:103231117-103232526 (+)
CBA/J ENSMUSG00210027588
 protein coding gene Chr9:103311696-103313133 (+)
DBA/2J ENSMUSG00185038298
 protein coding gene Chr9:103476905-103478344 (+)
FVB/NJ ENSMUSG00205048085
 protein coding gene Chr9:103485661-103487106 (+)
JF1/MsJ ENSUMUG00000040337
 protein coding gene Chr9:103299375-103300812 (+)
LP/J ENSMUSG00230049665
 protein coding gene Chr9:103626106-103627545 (+)
NOD/ShiLtJ ENSMUSG00190037080
 protein coding gene Chr9:103117705-103119144 (+)
NZO/HlLtJ ENSMUSG00225024323
 protein coding gene Chr9:103859481-103860932 (+)
PWK/PhJ ENSLUMG00010029856
 protein coding gene Chr9:103246263-103247700 (+)
SPRET/EiJ ENSMSPG00010031581
 protein coding gene Chr9:105111517-105112958 (+)
WSB/EiJ ENSIUOG00005036881
 protein coding gene Chr9:102555717-102557156 (+)



Homology
more
  • Human Ortholog
    IQCF5, IQ motif containing F5
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    IQCF5, IQ motif containing F5
  • Links
    NCBI Gene ID: 389124
    UniProt: A8MTL0

  • Chr Location
    3p21.2; chr3:51873721-51875601 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    6
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 75470 NCBI Gene Model | MGI Sequence Detail 1431 C57BL/6J ±  kb
transcript NM_029300 RefSeq | MGI Sequence Detail 538 C57BL/6  
polypeptide Q9DAL7 UniProt | EBI | MGI Sequence Detail 148 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 3
References
more
  • Summaries
    All 23
    Gene Ontology 1
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory