About   Help   FAQ
Slx4ip Gene Detail
Summary
  • Symbol
    Slx4ip
  • Name
    SLX4 interacting protein
  • Synonyms
    2210009G21Rik, 2410004I22Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921493
    NCBI Gene: 74243
  • Alliance
    genome feature page
  • Transcription Start Sites
    16 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:136733138-136913870 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 67.65 cM, cytoband G1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    3202 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921493
 protein coding gene Chr2:136733138-136923273 (+)
129S1/SvImJ ENSMUSG00200006871
 protein coding gene Chr2:133768434-133942056 (+)
A/J ENSMUSG00195014887
 protein coding gene Chr2:133825156-134005958 (+)
AKR/J ENSMUSG00220036953
 protein coding gene Chr2:133525903-133706697 (+)
BALB/cJ ENSMUSG00180027487
 protein coding gene Chr2:133641116-133821917 (+)
C3H/HeJ ENSMUSG00175032257
 protein coding gene Chr2:134170744-134351527 (+)
C57BL/6NJ ENSMUSG00215015376
 protein coding gene Chr2:133665597-133846370 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0024359
 protein coding gene Chr2:129517941-129678905 (+)
CAST/EiJ ENSTCUG00005010621
 protein coding gene Chr2:132911788-133091422 (+)
CBA/J ENSMUSG00210036766
 protein coding gene Chr2:134071778-134252530 (+)
DBA/2J ENSMUSG00185039299
 protein coding gene Chr2:133706083-133886855 (+)
FVB/NJ ENSMUSG00205023794
 protein coding gene Chr2:132836874-133017646 (+)
JF1/MsJ ENSUMUG00000029742
 protein coding gene Chr2:133476150-133655642 (+)
LP/J ENSMUSG00230008558
 protein coding gene Chr2:135394698-135568313 (+)
NOD/ShiLtJ ENSMUSG00190032975
 protein coding gene Chr2:133758627-133932267 (+)
NZO/HlLtJ ENSMUSG00225001223
 protein coding gene Chr2:143359573-143539081 (+)
PWK/PhJ ENSLUMG00010037556
 protein coding gene Chr2:133523626-133701562 (+)
SPRET/EiJ ENSMSPG00010026235
 protein coding gene Chr2:135893334-136064237 (+)
WSB/EiJ ENSIUOG00005022818
 protein coding gene Chr2:133565573-133746376 (+)



Homology
more
  • Human Ortholog
    SLX4IP, SLX4 interacting protein
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SLX4IP, SLX4 interacting protein
  • Synonyms
    bA204H22.1, bA254M13.1, C20orf94, dJ1099D15.3
  • Links
    NCBI Gene ID: 128710
    UniProt: Q5VYV7

  • Chr Location
    20p12.2; chr20:10435299-10636829 (+)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    33 phenotype references
  • All Mutations and Alleles
    22
  • Chemically induced (other)
    1
  • Gene trapped
    16
  • Radiation induced
    2
  • Targeted
    3
  • Genomic Mutations
    3 involving Slx4ip
  • Incidental Mutations
    APF , CvDC
  • Find Mice (IMSR)
    47 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    50
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000027281 Ensembl Gene Model | MGI Sequence Detail 180733 C57BL/6J ±  kb
transcript ENSMUST00000099311 Ensembl | MGI Sequence Detail 5089 Not Applicable  
polypeptide ENSMUSP00000096914 Ensembl | MGI Sequence Detail 413 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 51
    Genomic 1
    cDNA 50

    Microarray probesets 5
Other
Accession IDs
less
MGI:1919578, MGI:2142868
References
more
  • Summaries
    All 57
    Diseases 1
    Phenotypes 33
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory