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Nol9 Gene Detail
Summary
  • Symbol
    Nol9
  • Name
    nucleolar protein 9
  • Synonyms
    4632412I24Rik, 6030462G04Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921285
    NCBI Gene: 74035
  • Alliance
    genome feature page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:152123778-152145951 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 82.84 cM, cytoband E1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    919 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921285
 protein coding gene Chr4:152123731-152145951 (+)
129S1/SvImJ ENSMUSG00200018665
 protein coding gene Chr4:143178715-143212736 (+)
A/J ENSMUSG00195014804
 protein coding gene Chr4:144813580-144847391 (+)
AKR/J ENSMUSG00220023095
 protein coding gene Chr4:144400110-144433918 (+)
BALB/cJ ENSMUSG00180002352
 protein coding gene Chr4:142495661-142529484 (+)
C3H/HeJ ENSMUSG00175017382
 protein coding gene Chr4:145780681-145814491 (+)
C57BL/6NJ ENSMUSG00215012346
 protein coding gene Chr4:144624223-144658034 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026846
 protein coding gene Chr4:141941320-141963397 (+)
CAST/EiJ ENSTCUG00005031133
 protein coding gene Chr4:148497164-148534962 (+)
CBA/J ENSMUSG00210004695
 protein coding gene Chr4:144432309-144466118 (+)
DBA/2J ENSMUSG00185014346
 protein coding gene Chr4:147997244-148031052 (+)
FVB/NJ ENSMUSG00205012128
 protein coding gene Chr4:142893812-142927623 (+)
JF1/MsJ ENSUMUG00000004284
 protein coding gene Chr4:151020209-151053966 (+)
LP/J ENSMUSG00230022514
 protein coding gene Chr4:154730409-154764218 (+)
NOD/ShiLtJ ENSMUSG00190004051
 protein coding gene Chr4:144096462-144130271 (+)
NZO/HlLtJ ENSMUSG00225024059
 protein coding gene Chr4:158723785-158757606 (+)
PWK/PhJ ENSLUMG00010026145
 protein coding gene Chr4:143297916-143331736 (+)
SPRET/EiJ ENSMSPG00010023352
 protein coding gene Chr4:145233567-145258469 (+)
WSB/EiJ ENSIUOG00005005634
 protein coding gene Chr4:142307328-142340894 (+)



Homology
more
  • Human Ortholog
    NOL9, nucleolar protein 9
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    NOL9, nucleolar protein 9
  • Synonyms
    Grc3, NET6
  • Links
    NCBI Gene ID: 79707
    UniProt: Q5SY16

  • Chr Location
    1p36.31; chr1:6521347-6554536 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotypes from 1 allele in 1 genetic background
    13 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    26
  • GO References
    8
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    601
  • Tissues
    2
  • cDNA Data
    75
  • Literature Summary
    1
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000028948 Ensembl Gene Model | MGI Sequence Detail 22174 C57BL/6J ±  kb
    transcript ENSMUST00000084116 Ensembl | MGI Sequence Detail 3722 Not Applicable  
    polypeptide ENSMUSP00000081133 Ensembl | MGI Sequence Detail 714 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 75
      cDNA 75
      Antibodies 1

      Microarray probesets 7
    Other
    Accession IDs
    less
    MGI:1924323, MGI:2140288, MGI:2140575
    References
    more
    • Summaries
      All 47
      Developmental Gene Expression 1
      Gene Ontology 8
      Phenotypes 13
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:389866 Kim JA, et al., HAP1 interaction with KCNQ4 attenuates channel surface expression and function. Mol Cells. 2026 Mar;49(3):100322
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    09/08/2026
    MGI 6.24     		The Jackson Laboratory