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Lce1c Gene Detail
Summary
  • Symbol
    Lce1c
  • Name
    late cornified envelope 1C
  • Synonyms
    1110014K05Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1920969
    NCBI Gene: 73719
  • Alliance
    genome feature page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:92586554-92588225 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 40.14 cM, cytoband F2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    158 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920969
 protein coding gene Chr3:92586554-92588225 (+)
129S1/SvImJ ENSMUSG00200038400
 protein coding gene Chr3:89374175-89375846 (+)
A/J ENSMUSG00195053042
 protein coding gene Chr3:89383874-89385545 (+)
AKR/J ENSMUSG00220048036
 protein coding gene Chr3:88604674-88606345 (+)
BALB/cJ ENSMUSG00180047794
 protein coding gene Chr3:89549245-89550915 (+)
C3H/HeJ ENSMUSG00175047343
 protein coding gene Chr3:89321687-89323358 (+)
C57BL/6NJ ENSMUSG00215046005
 protein coding gene Chr3:89933062-89934733 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025277
 protein coding gene Chr3:86835951-86837624 (+)
CAST/EiJ ENSTCUG00005042240
 protein coding gene Chr3:89709138-89710808 (+)
CBA/J ENSMUSG00210046394
 protein coding gene Chr3:89436794-89438465 (+)
DBA/2J ENSMUSG00185051760
 protein coding gene Chr3:89639167-89640838 (+)
FVB/NJ ENSMUSG00205046307
 protein coding gene Chr3:88430711-88432382 (+)
JF1/MsJ ENSUMUG00000039506
 protein coding gene Chr3:89185608-89187278 (+)
LP/J ENSMUSG00230039027
 protein coding gene Chr3:91671642-91673313 (+)
NOD/ShiLtJ ENSMUSG00190045952
 protein coding gene Chr3:89759422-89761092 (+)
NZO/HlLtJ ENSMUSG00225009139
 protein coding gene Chr3:94519833-94521504 (+)
PWK/PhJ ENSLUMG00010046285
 protein coding gene Chr3:89245713-89247383 (+)
SPRET/EiJ ENSMSPG00010048494
 protein coding gene Chr3:89703020-89704655 (+)
WSB/EiJ ENSIUOG00005044772
 protein coding gene Chr3:89911031-89912701 (+)



Homology
more
  • Human Ortholog
    LCE1B, late cornified envelope 1B
  • Vertebrate Orthologs
    6
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    LCE1B, late cornified envelope 1B
  • Synonyms
    LEP2, SPRL2A
  • Links
    NCBI Gene ID: 353132
    UniProt: Q5T7P3

  • Chr Location
    1q21.3; chr1:152811971-152813108 (+)  GRCh38
  • Human Ortholog
    LCE1C, late cornified envelope 1C
  • Synonyms
    LEP3
  • Links
    NCBI Gene ID: 353133
    UniProt: Q5T751

  • Chr Location
    1q21.3; chr1:152804832-152806651 (-)  GRCh38
  • Human Ortholog
    LCE1E, late cornified envelope 1E
  • Synonyms
    LEP5
  • Links
    NCBI Gene ID: 353135
    UniProt: Q5T753

  • Chr Location
    1q21.3; chr1:152786214-152788426 (+)  GRCh38
  • Human Ortholog
    LCE1F, late cornified envelope 1F
  • Synonyms
    LEP6
  • Links
    NCBI Gene ID: 353137
    UniProt: Q5T754

  • Chr Location
    1q21.3; chr1:152775140-152777024 (+)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    2 involving Lce1c
  • Find Mice (IMSR)
    5 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    1
Molecular Function

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    2
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 73719 NCBI Gene Model | MGI Sequence Detail 1672 C57BL/6J ±  kb
transcript NM_028622 RefSeq | MGI Sequence Detail 724 C57BL/6  
polypeptide NP_082898 RefSeq | MGI Sequence Detail 147 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 2
References
more
  • Summaries
    All 23
    Developmental Gene Expression 1
    Diseases 1
    Gene Ontology 1
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory