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Mir100hg Gene Detail
Summary
  • Symbol
    Mir100hg
  • Name
    Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
  • Synonyms
    2610203C20Rik, 3110039I08Rik, D230004N17Rik
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1920394
    NCBI Gene: 73144
  • Alliance
  • Transcription Start Sites
    24 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:41287822-41526481 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 9, 23.32 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    6541 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920394
lncRNA gene Chr9:41238321-41628290 (+)
129S1/SvImJ ENSMUSG00200040799
lncRNA gene Chr9:38315367-38709153 (+)
A/J ENSMUSG00195050011
lncRNA gene Chr9:38072348-38467208 (+)
AKR/J ENSMUSG00220047728
lncRNA gene Chr9:38154083-38550953 (+)
BALB/cJ ENSMUSG00180047956
lncRNA gene Chr9:38195584-38578940 (+)
C3H/HeJ ENSMUSG00175050622
lncRNA gene Chr9:38196079-38590875 (+)
C57BL/6NJ ENSMUSG00215036278
lncRNA gene Chr9:38156251-38546192 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0013856
unclassified non-coding RNA gene Chr9:38254259-38494796 (+)
CAST/EiJ ENSTCUG00005045256
lncRNA gene Chr9:38145651-38534911 (+)
CBA/J ENSMUSG00210047875
lncRNA gene Chr9:38242900-38636722 (+)
DBA/2J ENSMUSG00185039453
lncRNA gene Chr9:38291923-38688731 (+)
FVB/NJ ENSMUSG00205043644
lncRNA gene Chr9:38560873-38953791 (+)
JF1/MsJ ENSUMUG00000047178
lncRNA gene Chr9:38347251-38743716 (+)
LP/J no annotation
NOD/ShiLtJ ENSMUSG00190034138
lncRNA gene Chr9:38383531-38778278 (+)
NZO/HlLtJ no annotation
PWK/PhJ ENSLUMG00010048534
lncRNA gene Chr9:38308155-38697070 (+)
SPRET/EiJ ENSMSPG00010036706
lncRNA gene Chr9:39045542-39447712 (+)
WSB/EiJ ENSIUOG00005045036
lncRNA gene Chr9:37799230-38199957 (+)



Homology
more
  • Human Ortholog
    MIR100HG, mir-100-let-7a-2-mir-125b-1 cluster host gene
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MIR100HG, mir-100-let-7a-2-mir-125b-1 cluster host gene
  • Synonyms
    AGD1, linc-NeD125, lncRNA-N2
  • Links
    NCBI Gene ID: 399959

  • Chr Location
    11q24.1; chr11:122028325-122556721 (-)  GRCh38

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 73144 NCBI Gene Model | MGI Sequence Detail 238660 C57BL/6J ±  kb
transcript NR_131930 RefSeq | MGI Sequence Detail 3053 C57BL/6  
polypeptide Q3URL6 UniProt | EBI | MGI Sequence Detail 156 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 72
    cDNA 71
    Other 1

    Microarray probesets 2
Other
Accession IDs
less
MGI:1917705, MGI:2444825, MGI:6297109
References
more
  • Summaries
    All 21
    Developmental Gene Expression 3
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:331893 Yang J, et al., Identifying key m(6)A-methylated lncRNAs and genes associated with neural tube defects via integrative MeRIP and RNA sequencing analyses. Front Genet. 2022;13:974357

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/08/2026
MGI 6.24
The Jackson Laboratory