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R3hcc1 Gene Detail
Summary
  • Symbol
    R3hcc1
  • Name
    R3H domain and coiled-coil containing 1
  • Synonyms
    1700020M16Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919093
    NCBI Gene: 71843
  • Alliance
    genome feature page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:69934756-69945033 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 36.08 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    230 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919093
 protein coding gene Chr14:69934753-69952258 (-)
129S1/SvImJ ENSMUSG00200027815
 protein coding gene Chr14:58326019-58336463 (-)
A/J ENSMUSG00195013246
 protein coding gene Chr14:58507613-58517890 (-)
AKR/J ENSMUSG00220029884
 protein coding gene Chr14:57843347-57853624 (-)
BALB/cJ ENSMUSG00180034806
 protein coding gene Chr14:58116184-58126461 (-)
C3H/HeJ ENSMUSG00175031701
 protein coding gene Chr14:59876756-59887033 (-)
C57BL/6NJ ENSMUSG00215012143
 protein coding gene Chr14:58052916-58063193 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0019467
 protein coding gene Chr14:60798428-60808745 (-)
CAST/EiJ ENSTCUG00005036264
 protein coding gene Chr14:59748902-59759077 (-)
CBA/J ENSMUSG00210039170
 protein coding gene Chr14:58492613-58502890 (-)
DBA/2J ENSMUSG00185023404
 protein coding gene Chr14:63662173-63672450 (-)
FVB/NJ ENSMUSG00205034016
 protein coding gene Chr14:58002091-58012368 (-)
JF1/MsJ ENSUMUG00000022373
 protein coding gene Chr14:74836688-74847142 (-)
LP/J ENSMUSG00230012711
 protein coding gene Chr14:75689645-75707950 (-)
NOD/ShiLtJ ENSMUSG00190032282
 protein coding gene Chr14:58287327-58297604 (-)
NZO/HlLtJ ENSMUSG00225038253
 protein coding gene Chr14:66014661-66024938 (-)
PWK/PhJ ENSLUMG00010037474
 protein coding gene Chr14:57688197-57698660 (-)
SPRET/EiJ ENSMSPG00010025802
 protein coding gene Chr14:61239689-61250532 (-)
WSB/EiJ ENSIUOG00005036660
 protein coding gene Chr14:57729158-57739435 (-)



Homology
more
  • Human Ortholog
    R3HCC1, R3H domain and coiled-coil containing 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    R3HCC1, R3H domain and coiled-coil containing 1
  • Links
    NCBI Gene ID: 203069
    UniProt: Q9Y3T6

  • Chr Location
    8p21.3; chr8:23270120-23296279 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
  • All Mutations and Alleles
    9
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    4
  • Gene trapped
    3
  • Targeted
    1
  • Genomic Mutations
    1 involving R3hcc1
  • Incidental Mutations
    APF , CvDC
  • Find Mice (IMSR)
    20 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    49
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000034194 Ensembl Gene Model | MGI Sequence Detail 10278 C57BL/6J ±  kb
transcript ENSMUST00000121142 Ensembl | MGI Sequence Detail 1958 Not Applicable  
polypeptide ENSMUSP00000113898 Ensembl | MGI Sequence Detail 488 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 49
    cDNA 49

    Microarray probesets 4
Other
Accession IDs
less
MGI:1353600
References
more
  • Summaries
    All 35
    Gene Ontology 1
    Phenotypes 10
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory