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Ccdc89 Gene Detail
Summary
  • Symbol
    Ccdc89
  • Name
    coiled-coil domain containing 89
  • Synonyms
    1700019B01Rik, BOIP
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917304
    NCBI Gene: 70054
  • Alliance
    genome feature page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:90075785-90077877 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 50.58 cM, cytoband E1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    170 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917304
 protein coding gene Chr7:90075520-90077877 (+)
129S1/SvImJ ENSMUSG00200026651
 protein coding gene Chr7:76845294-76847386 (+)
A/J ENSMUSG00195038051
 protein coding gene Chr7:81369771-81371863 (+)
AKR/J ENSMUSG00220041783
 protein coding gene Chr7:74840811-74842903 (+)
BALB/cJ ENSMUSG00180035601
 protein coding gene Chr7:78046065-78048157 (+)
C3H/HeJ ENSMUSG00175032236
 protein coding gene Chr7:78736421-78738513 (+)
C57BL/6NJ ENSMUSG00215018874
 protein coding gene Chr7:77911944-77914036 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029984
 protein coding gene Chr7:93495813-93498155 (+)
CAST/EiJ ENSTCUG00005028520
 protein coding gene Chr7:81337559-81339648 (+)
CBA/J ENSMUSG00210033802
 protein coding gene Chr7:78578314-78580406 (+)
DBA/2J ENSMUSG00185032179
 protein coding gene Chr7:82907955-82910047 (+)
FVB/NJ ENSMUSG00205028077
 protein coding gene Chr7:78524199-78526291 (+)
JF1/MsJ ENSUMUG00000011625
 protein coding gene Chr7:87851965-87854050 (+)
LP/J ENSMUSG00230015159
 protein coding gene Chr7:88997225-88999317 (+)
NOD/ShiLtJ ENSMUSG00190024919
 protein coding gene Chr7:78790423-78792515 (+)
NZO/HlLtJ ENSMUSG00225010698
 protein coding gene Chr7:87272152-87274244 (+)
PWK/PhJ ENSLUMG00010036941
 protein coding gene Chr7:77049356-77051441 (+)
SPRET/EiJ ENSMSPG00010012362
 protein coding gene Chr7:78083663-78085754 (+)
WSB/EiJ ENSIUOG00005032801
 protein coding gene Chr7:79182578-79184670 (+)



Homology
more
  • Human Ortholog
    CCDC89, coiled-coil domain containing 89
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CCDC89, coiled-coil domain containing 89
  • Links
    NCBI Gene ID: 220388
    UniProt: Q8N998

  • Chr Location
    11q14.1; chr11:85683848-85686195 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    31 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    612
  • Tissues
    14
  • cDNA Data
    11
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000044362 Ensembl Gene Model | MGI Sequence Detail 2093 C57BL/6J ±  kb
transcript ENSMUST00000061391 Ensembl | MGI Sequence Detail 2093 Not Applicable  
polypeptide ENSMUSP00000060309 Ensembl | MGI Sequence Detail 370 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 13
    cDNA 11
    Other 2

    Microarray probesets 4
Other
Accession IDs
less
MGI:2142140
References
more
  • Summaries
    All 57
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 31
  • Earliest
    J:141526 Russell LB, et al., Analysis of the albino-locus region of the mouse. III. Time of death of prenatal lethals. Genetics. 1979 May;92(1):205-13
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory