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Zfp397 Gene Detail
Summary
  • Symbol
    Zfp397
  • Name
    zinc finger protein 397
  • Synonyms
    2810411K16Rik, 6720480F11Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916506
    NCBI Gene: 69256
  • Alliance
    genome feature page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr18:24087749-24097730 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 18, 12.44 cM, cytoband B1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    277 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916506
 protein coding gene Chr18:24085798-24098030 (+)
129S1/SvImJ MGP_129S1SvImJ_G0024194
 protein coding gene Chr18:21666119-21676102 (+)
A/J MGP_AJ_G0024159
 protein coding gene Chr18:21084931-21094921 (+)
AKR/J MGP_AKRJ_G0024128
 protein coding gene Chr18:21727539-21737522 (+)
BALB/cJ MGP_BALBcJ_G0024159
 protein coding gene Chr18:21132452-21142435 (+)
C3H/HeJ MGP_C3HHeJ_G0023927
 protein coding gene Chr18:21646908-21656898 (+)
C57BL/6NJ MGP_C57BL6NJ_G0024601
 protein coding gene Chr18:22603925-22613908 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0022043
 protein coding gene Chr18:20955526-20967087 (+)
CAST/EiJ MGP_CASTEiJ_G0023401
 protein coding gene Chr18:21440828-21450806 (+)
CBA/J MGP_CBAJ_G0023895
 protein coding gene Chr18:23199023-23209006 (+)
DBA/2J MGP_DBA2J_G0024027
 protein coding gene Chr18:20762876-20772859 (+)
FVB/NJ MGP_FVBNJ_G0023993
 protein coding gene Chr18:20511039-20521022 (+)
LP/J MGP_LPJ_G0024108
 protein coding gene Chr18:21840144-21850126 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0024021
 protein coding gene Chr18:24231862-24241845 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0024649
 protein coding gene Chr18:21483744-21493800 (+)
PWK/PhJ MGP_PWKPhJ_G0023145
 protein coding gene Chr18:20887476-20897539 (+)
SPRET/EiJ MGP_SPRETEiJ_G0022954
 protein coding gene Chr18:21710436-21721575 (+)
WSB/EiJ MGP_WSBEiJ_G0023465
 protein coding gene Chr18:21380011-21389995 (+)



Homology
more
  • Human Ortholog
    ZNF397, zinc finger protein 397
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ZNF397, zinc finger protein 397
  • Synonyms
    ZNF47, ZSCAN15
  • Links
    NCBI Gene ID: 84307
    UniProt: Q8NF99

  • Chr Location
    18q12.2; chr18:35240508-35267133 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    634
  • Tissues
    37
  • cDNA Data
    66
  • Literature Summary
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000024276 Ensembl Gene Model | MGI Sequence Detail 9982 C57BL/6J ±  kb
transcript ENSMUST00000060762 Ensembl | MGI Sequence Detail 5472 Not Applicable  
polypeptide ENSMUSP00000057253 Ensembl | MGI Sequence Detail 527 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 67
    cDNA 66
    Primer pair 1

    Microarray probesets 5
Other
Accession IDs
less
MGI:2147233, MGI:2443092
References
more
  • Summaries
    All 31
    Developmental Gene Expression 3
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
07/08/2026
MGI 6.24 		The Jackson Laboratory