Gask1b MGI Mouse Gene Detail - MGI:1915909 - golgi associated kinase 1B

Symbol

Gask1b
Name

golgi associated kinase 1B
Synonyms

1110032E23Rik, 2210419I08Rik, Ened, Fam198b

Feature Type

protein coding gene
IDs

MGI:1915909
NCBI Gene: 68659
Alliance

genome feature page
Transcription Start Sites

17 TSS

Sequence Map

Chr3:79791840-79853587 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 3, 35.13 cM
Mapping Data

2 experiments

SNPs within 2kb

2068 from dbSNP Build 142
Strain Annotations

14

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1915909	protein coding gene	Chr3:79791795-79853587 (+)
129S1/SvImJ	ENSMUSGG00200054763	protein coding gene	Chr3:76589391-76617542 (+)
A/J	ENSMUSGG00195055285	protein coding gene	Chr3:76649397-76677596 (+)
AKR/J	ENSMUSGG00220054508	protein coding gene	Chr3:76663898-76692039 (+)
BALB/cJ	ENSMUSGG00180055345	protein coding gene	Chr3:76741540-76769680 (+)
C3H/HeJ	ENSMUSGG00175054694	protein coding gene	Chr3:76587552-76615749 (+)
C57BL/6NJ	ENSMUSGG00215055681	protein coding gene	Chr3:77048632-77076766 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0025090	protein coding gene	Chr3:72915351-72975865 (+)
CAST/EiJ	no annotation
CBA/J	ENSMUSGG00210054753	protein coding gene	Chr3:76680061-76708263 (+)
DBA/2J	ENSMUSGG00185057782	protein coding gene	Chr3:76826277-76854419 (+)
FVB/NJ	ENSMUSGG00205054366	protein coding gene	Chr3:75681371-75709519 (+)
JF1/MsJ	no annotation
LP/J	ENSMUSGG00230055720	protein coding gene	Chr3:78843990-78872128 (+)
NOD/ShiLtJ	ENSMUSGG00190054843	protein coding gene	Chr3:77160683-77188822 (+)
NZO/HlLtJ	ENSMUSGG00225055613	protein coding gene	Chr3:81556303-81584441 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Human Ortholog

GASK1B, golgi associated kinase 1B

Vertebrate Orthologs

3

Vertebrate Orthology Source

Alliance of Genome Resources

Human Ortholog

GASK1B, golgi associated kinase 1B
Synonyms

AD021, AD036, C4orf18, ENED, FAM198B
Links

HGNC:25312

NCBI Gene ID: 51313

UniProt: Q6UWH4
Chr Location

4q32.1; chr4:158124474-158174249 (-) GRCh38

MGI Vertebrate Homology

Gask1b stringent orthology
1 human;1 mouse;1 rat;1 zebrafish
HCOP

vertebrate homology predictions: GASK1B
Gene Tree

Gask1b

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References

1 with disease annotations

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Phenotype Summary

8 phenotype references

All Mutations and Alleles

6
Chemically induced (other)

1
Endonuclease-mediated

2
Radiation induced

1
Targeted

2
Genomic Mutations

2 involving Gask1b
Incidental Mutations

Mutagenetix , APF , CvDC
Find Mice (IMSR)

27 strains or lines available

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All GO Annotations

5
GO References

5

Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

cell projection	cytoplasmic vesicle	cytoskeleton	cytosol	endoplasmic reticulum	endosome	extracellular region	Golgi apparatus	mitochondrion	membraneless organelle	nucleus	organelle envelope	organelle lumen	plasma membrane	protein-containing complex	synapse	vacuole

Click cells to view annotations.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

728
Tissues

50
cDNA Data

13
Literature Summary

3

Images

Tissue x Stage Matrix

Other Mouse Links

Allen Institute

GEO

Expression Atlas
Other Vertebrate Links

Xenbase gask1b

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All Sequences

49
RefSeq

6
UniProt

2
CCDS

CCDS17422.1

Ensembl

ENSMUSG00000027955 (Evidence)
NCBI Gene

68659

			Length	Strain/Species	Flank
genomic	ENSMUSG00000027955	Ensembl Gene Model \| MGI Sequence Detail	61748	C57BL/6J	± kb
transcript	ENSMUST00000029567	Ensembl \| MGI Sequence Detail	6627	Not Applicable
polypeptide	ENSMUSP00000029567	Ensembl \| MGI Sequence Detail	517	Not Applicable

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UniProt

2 Sequences
Protein Ontology

PR:000032287 Golgi-associated kinase 1B

(term hierarchy)
InterPro Domains

IPR029207 FAM198 family
GlyGen

Q3UPI1 2 sites

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All nucleic 13

cDNA 13

Microarray probesets 4

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MGI:1920913, MGI:2139925, MGI:6276587

Summaries

All 36

Developmental Gene Expression 3

Diseases 1

Gene Ontology 5

Phenotypes 8
Earliest

J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
Latest

J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426

TSS for Gask1b:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr29596	Chr3:79791803-79791878 (+)	1 bp
Tssr29597	Chr3:79791883-79791899 (+)	51 bp
Tssr29598	Chr3:79792331-79792397 (+)	524 bp
Tssr29599	Chr3:79792413-79792426 (+)	580 bp
Tssr29600	Chr3:79792459-79792475 (+)	627 bp
Tssr29601	Chr3:79792490-79792504 (+)	657 bp
Tssr29602	Chr3:79793256-79793309 (+)	1,443 bp
Tssr29603	Chr3:79793347-79793371 (+)	1,519 bp
Tssr29604	Chr3:79793419-79793428 (+)	1,584 bp
Tssr29605	Chr3:79793488-79793516 (+)	1,662 bp
Tssr29606	Chr3:79793521-79793534 (+)	1,688 bp
Tssr29607	Chr3:79794191-79794202 (+)	2,357 bp
Tssr29608	Chr3:79794209-79794262 (+)	2,396 bp
Tssr29609	Chr3:79807985-79807989 (+)	16,147 bp
Tssr29610	Chr3:79815953-79815964 (+)	24,119 bp
Tssr29611	Chr3:79843744-79843753 (+)	51,909 bp
Tssr29612	Chr3:79843771-79843777 (+)	51,934 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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