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Vstm2b Gene Detail
Summary
  • Symbol
    Vstm2b
  • Name
    V-set and transmembrane domain containing 2B
  • Synonyms
    2900093B09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914525
    NCBI Gene: 58188
  • Alliance
    genome feature page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:40547614-40579468 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 27.88 cM, cytoband B2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1092 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914525
 protein coding gene Chr7:40547614-40580018 (+)
129S1/SvImJ ENSMUSG00200023880
 protein coding gene Chr7:28352947-28385211 (+)
A/J ENSMUSG00195041547
 protein coding gene Chr7:32075841-32108059 (+)
AKR/J ENSMUSG00220026659
 protein coding gene Chr7:19242306-19274572 (+)
BALB/cJ ENSMUSG00180019682
 protein coding gene Chr7:29666115-29698329 (+)
C3H/HeJ ENSMUSG00175027766
 protein coding gene Chr7:29845384-29877648 (+)
C57BL/6NJ ENSMUSG00215011737
 protein coding gene Chr7:28813033-28845299 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029603
 protein coding gene Chr7:40117749-40149450 (+)
CAST/EiJ ENSTCUG00005042326
 protein coding gene Chr7:31760078-31792338 (+)
CBA/J ENSMUSG00210024488
 protein coding gene Chr7:29864475-29896742 (+)
DBA/2J ENSMUSG00185047141
 protein coding gene Chr7:33209130-33241366 (+)
FVB/NJ ENSMUSG00205016550
 protein coding gene Chr7:29968752-30000978 (+)
JF1/MsJ ENSUMUG00000021177
 protein coding gene Chr7:37684951-37717188 (+)
LP/J ENSMUSG00230012577
 protein coding gene Chr7:38934394-38966623 (+)
NOD/ShiLtJ ENSMUSG00190007679
 protein coding gene Chr7:29963604-29995830 (+)
NZO/HlLtJ ENSMUSG00225008198
 protein coding gene Chr7:37237468-37269758 (+)
PWK/PhJ ENSLUMG00010021775
 protein coding gene Chr7:28706170-28738376 (+)
SPRET/EiJ ENSMSPG00010005451
 protein coding gene Chr7:28724352-28756097 (+)
WSB/EiJ ENSIUOG00005008204
 protein coding gene Chr7:29590949-29623171 (+)



Homology
more
  • Human Ortholog
    VSTM2B, V-set and transmembrane domain containing 2B
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    VSTM2B, V-set and transmembrane domain containing 2B
  • Links
    NCBI Gene ID: 342865
    UniProt: A6NLU5

  • Chr Location
    19q12; chr19:29524739-29564553 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    646
  • Tissues
    9
  • cDNA Data
    7
  • Literature Summary
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 58188 NCBI Gene Model | MGI Sequence Detail 31855 C57BL/6J ±  kb
transcript NM_001418632 RefSeq | MGI Sequence Detail 2335 C57BL/6  
polypeptide Q9JME9 UniProt | EBI | MGI Sequence Detail 285 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • Protein Ontology
    PR:000032077 V-set and transmembrane domain-containing protein 2B
    (term hierarchy)
  • InterPro Domains
    IPR003599 Immunoglobulin domain subtype
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR051102 Immunoglobulin superfamily V-set and transmembrane domain-containing protein
    IPR013106 Immunoglobulin V-set domain
Molecular
Reagents
less
  • All nucleic 9
    cDNA 7
    Primer pair 1
    Other 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:1927557
References
more
  • Summaries
    All 29
    Developmental Gene Expression 3
    Gene Ontology 2
    Phenotypes 3
  • Earliest
    J:64911 Inoue S, et al., Growth suppression of Escherichia coli by induction of expression of mammalian genes with transmembrane or ATPase domains. Biochem Biophys Res Commun. 2000 Feb 16;268(2):553-61
  • Latest
    J:331971 Martynova E, et al., Transcriptomic analysis and novel insights into lens fibre cell differentiation regulated by Gata3. Open Biol. 2019 Dec;9(12):190220
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory