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Tceanc2 Gene Detail
Summary
  • Symbol
    Tceanc2
  • Name
    transcription elongation factor A (SII) N-terminal and central domain containing 2
  • Synonyms
    2210010B22Rik, 2210012G02Rik, 6330404A07Rik, Tdeanc2
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913776
    NCBI Gene: 66526
  • Alliance
    genome feature page
  • Transcription Start Sites
    12 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:106991352-107035563 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 50.07 cM, cytoband C7
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1121 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913776
 protein coding gene Chr4:106991352-107036313 (-)
129S1/SvImJ ENSMUSG00200045037
 protein coding gene Chr4:102050453-102099292 (-)
A/J ENSMUSG00195042517
 protein coding gene Chr4:102593317-102642160 (-)
AKR/J ENSMUSG00220011228
 protein coding gene Chr4:102001653-102046541 (-)
BALB/cJ ENSMUSG00180042687
 protein coding gene Chr4:101436554-101483027 (-)
C3H/HeJ ENSMUSG00175038172
 protein coding gene Chr4:102441063-102487527 (-)
C57BL/6NJ ENSMUSG00215026355
 protein coding gene Chr4:102323394-102368365 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026245
 protein coding gene Chr4:99222375-99266305 (-)
CAST/EiJ ENSTCUG00005007149
 protein coding gene Chr4:101542368-101587861 (-)
CBA/J ENSMUSG00210052078
 protein coding gene Chr4:102074080-102120542 (-)
DBA/2J ENSMUSG00185048958
 protein coding gene Chr4:102770052-102822501 (-)
FVB/NJ ENSMUSG00205009807
 protein coding gene Chr4:101004990-101053826 (-)
JF1/MsJ ENSUMUG00000035027
 protein coding gene Chr4:102786913-102832867 (-)
LP/J ENSMUSG00230006070
 protein coding gene Chr4:106086913-106135750 (-)
NOD/ShiLtJ ENSMUSG00190043658
 protein coding gene Chr4:101443871-101490331 (-)
NZO/HlLtJ ENSMUSG00225032251
 protein coding gene Chr4:111188633-111241079 (-)
PWK/PhJ ENSLUMG00010018326
 protein coding gene Chr4:100510623-100551329 (-)
SPRET/EiJ ENSMSPG00010024272
 protein coding gene Chr4:102760340-102801369 (-)
WSB/EiJ ENSIUOG00005041596
 protein coding gene Chr4:101652014-101696977 (-)



Homology
more
  • Human Ortholog
    TCEANC2, transcription elongation factor A N-terminal and central domain containing 2
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TCEANC2, transcription elongation factor A N-terminal and central domain containing 2
  • Synonyms
    C1orf83
  • Links
    NCBI Gene ID: 127428
    UniProt: Q96MN5

  • Chr Location
    1p32.3; chr1:54052867-54112520 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotypes from 1 allele in 1 genetic background
    17 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    640
  • Tissues
    29
  • cDNA Data
    17
  • Literature Summary
    1
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 66526 NCBI Gene Model | MGI Sequence Detail 44212 C57BL/6J ±  kb
    transcript NM_025617 RefSeq | MGI Sequence Detail 6243 Not Specified  
    polypeptide Q8R2M0 UniProt | EBI | MGI Sequence Detail 207 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      4 Sequences
    • Protein Ontology
      PR:000030203 transcription elongation factor A N-terminal and central domain-containing protein 2
      (term hierarchy)
    • InterPro Domains
      IPR035441 TFIIS/LEDGF domain superfamily
      IPR003618 Transcription elongation factor S-II, central domain
      IPR036575 Transcription elongation factor S-II, central domain superfamily
      IPR003617 Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type
      IPR017923 Transcription factor IIS, N-terminal
    Molecular
    Reagents
    less
    • All nucleic 17
      cDNA 17

      Microarray probesets 6
    Other
    Accession IDs
    less
    MGI:1918004, MGI:1919549, MGI:2140429
    References
    more
    • Summaries
      All 43
      Developmental Gene Expression 1
      Gene Ontology 3
      Phenotypes 17
    • Earliest
      J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
    • Latest
      J:201630 Ryder E, et al., Molecular characterization of mutant mouse strains generated from the EUCOMM/KOMP-CSD ES cell resource. Mamm Genome. 2013 Aug;24(7-8):286-94
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    09/08/2026
    MGI 6.24     		The Jackson Laboratory