About   Help   FAQ
Smgc Gene Detail
Summary
  • Symbol
    Smgc
  • Name
    submandibular gland protein C
  • Synonyms
    2310010P21Rik, DXImx49e, Sfc21
  • Feature Type
    protein coding gene
  • IDs
    MGI:1859618
    NCBI Gene: 223809
  • Alliance
    genome feature page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:91722531-91745633 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 46.14 cM
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    679 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1859618
 protein coding gene Chr15:91722468-91745636 (+)
129S1/SvImJ ENSMUSG00200034332
 protein coding gene Chr15:88880678-88983372 (+)
A/J ENSMUSG00195018613
 protein coding gene Chr15:88777333-88877092 (+)
AKR/J ENSMUSG00220029581
 protein coding gene Chr15:88819380-88916651 (+)
BALB/cJ ENSMUSG00180014683
 protein coding gene Chr15:88655895-88759045 (+)
C3H/HeJ ENSMUSG00175024111
 protein coding gene Chr15:88963805-89063778 (+)
C57BL/6NJ ENSMUSG00215019424
 protein coding gene Chr15:88760983-88867063 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0020186
 protein coding gene Chr15:85696872-85716431 (+)
CAST/EiJ no annotation
CBA/J ENSMUSG00210013065
 protein coding gene Chr15:88733242-88832717 (+)
DBA/2J ENSMUSG00185020747
 protein coding gene Chr15:88746772-88833049 (+)
FVB/NJ ENSMUSG00205022357
 protein coding gene Chr15:88505564-88603380 (+)
JF1/MsJ no annotation
LP/J ENSMUSG00230044259
 protein coding gene Chr15:92103006-92221345 (+)
NOD/ShiLtJ ENSMUSG00190028398
 protein coding gene Chr15:88778312-88884409 (+)
NZO/HlLtJ ENSMUSG00225042958
 protein coding gene Chr15:92417306-92528313 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    26 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    689
  • Tissues
    14
  • cDNA Data
    10
  • Literature Summary
    7
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 223809 NCBI Gene Model | MGI Sequence Detail 23103 C57BL/6J ±  kb
transcript NM_198927 RefSeq | MGI Sequence Detail 2977 C57BL/6  
polypeptide Q6JHY2 UniProt | EBI | MGI Sequence Detail 733 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    9 Sequences
  • GlyGen
    Q6JHY2 10 sites
Molecular
Reagents
less
  • All nucleic 19
    Genomic 2
    cDNA 10
    Primer pair 7
    Antibodies 4

    Microarray probesets 4
Other
Accession IDs
less
MGI:1916839
References
more
  • Summaries
    All 69
    Developmental Gene Expression 7
    Diseases 1
    Gene Ontology 1
    Phenotypes 26
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:387680 Ahn B, et al., Disorganization of Transcriptional Regulation and Alteration of Keratin Family Gene Expression in Hairy Ear Mice. Genes (Basel). 2026 Jan 31;17(2)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory