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Snhg14 Gene Detail
Summary
  • Symbol
    Snhg14
  • Name
    small nucleolar RNA host gene 14
  • Synonyms
    C230091D08Rik, D7Ertd715e, Gm42386, Gm42387, Gm42388, Gm42389, Gm42390, Gm42391, Gm45921, Lncat
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1289201
    NCBI Gene: 52480
  • Alliance
    genome feature page
  • Transcription Start Sites
    9 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:58957672-59628040 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 34.04 cM
  • Mapping Data
    5 experiments
Strain
Comparison
more
  • SNPs within 2kb
    5388 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1289201
 lncRNA gene Chr7:58922485-60099925 (-)
129S1/SvImJ ENSMUSG00200009610
 lncRNA gene Chr7:46358437-46538785 (-)
A/J ENSMUSG00195011301
 lncRNA gene Chr7:50436247-50778482 (-)
AKR/J no annotation
BALB/cJ ENSMUSG00180011093
 lncRNA gene Chr7:47455621-47568839 (-)
C3H/HeJ ENSMUSG00175003494
 lncRNA gene Chr7:47843212-48313042 (-)
C57BL/6NJ ENSMUSG00215002226
 lncRNA gene Chr7:47294155-47414879 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0013796
 unclassified non-coding RNA gene Chr7:61699646-62122117 (-)
CAST/EiJ ENSTCUG00005012421
 lncRNA gene Chr7:50741359-51367286 (-)
CBA/J ENSMUSG00210017564
 lncRNA gene Chr7:48237639-48415367 (-)
DBA/2J ENSMUSG00185006463
 lncRNA gene Chr7:52221662-52810526 (-)
FVB/NJ ENSMUSG00205001632
 lncRNA gene Chr7:48002991-48105311 (-)
JF1/MsJ ENSUMUG00000016423
 lncRNA gene Chr7:56953050-57526789 (-)
LP/J ENSMUSG00230006568
 lncRNA gene Chr7:57684369-58201409 (-)
NOD/ShiLtJ ENSMUSG00190003834
 lncRNA gene Chr7:48273946-48452333 (-)
NZO/HlLtJ ENSMUSG00225011153
 lncRNA gene Chr7:55911274-56437446 (-)
PWK/PhJ ENSLUMG00010002433
 lncRNA gene Chr7:46800242-47013313 (-)
SPRET/EiJ ENSMSPG00010001668
 lncRNA gene Chr7:46894022-47177747 (-)
WSB/EiJ ENSIUOG00005005987
 lncRNA gene Chr7:48046101-48773070 (-)



Homology
more
  • Human Ortholog
    SNHG14, small nucleolar RNA host gene 14
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SNHG14, small nucleolar RNA host gene 14
  • Synonyms
    115HG, IC-SNURF-SNRPN, IPW, LNCAT, NCRNA00002, NCRNA00214, UBE3A-AS, UBE3A-AS1, UBE3A-ATS, UBE3AATS, U-UBE3A-ATS
  • Links
    NCBI Gene ID: 104472715

  • Chr Location
    15q11.2; chr15:24823608-25420336 (+)  GRCh38
Human Diseases
less
  • References
    5 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    15 phenotypes from 3 alleles in 3 genetic backgrounds
    6 phenotypes from multigenic genotypes
    56 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a targeted allele ameliorates behavioral defects in the Angelman Syndrome mouse model.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    36
  • Literature Summary
    1
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    • All Sequences
      70
    • RefSeq
      2
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000100826 Ensembl Gene Model | MGI Sequence Detail 670369 C57BL/6J ±  kb
    transcript ENSMUST00000189581 Ensembl | MGI Sequence Detail 6861 Not Applicable  
    For the selected sequence
    Molecular
    Reagents
    less
    • All nucleic 37
      cDNA 36
      Primer pair 1

      Microarray probesets 3
    Other
    Accession IDs
    less
    MGI:2142125, MGI:3041193, MGI:5625271, MGI:5625272, MGI:5625273, MGI:5625274, MGI:5625275, MGI:5625276, MGI:5825558
    References
    more
    • Summaries
      All 101
      Developmental Gene Expression 1
      Diseases 5
      Phenotypes 56
    • Earliest
      J:29903 Russell LB, et al., Complementation analyses for 45 mutations encompassing the pink-eyed dilution (p) locus of the mouse. Genetics. 1995 Dec;141(4):1547-62
    • Latest
      J:392304 Webberley AE, et al., Placental defects revealed by modelling Prader-Willi syndrome in mice. Dis Model Mech. 2026 Aug 1;19(8)
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    10/06/2026
    MGI 6.29     		The Jackson Laboratory