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Yipf3 Gene Detail
Summary
  • Symbol
    Yipf3
  • Name
    Yip1 domain family, member 3
  • Synonyms
    D17Wsu94e
  • Feature Type
    protein coding gene
  • IDs
    MGI:106280
    NCBI Gene: 28064
  • Alliance
    genome feature page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:46559019-46563474 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 22.90 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    153 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_106280
 protein coding gene Chr17:46559006-46563474 (+)
129S1/SvImJ ENSMUSG00200024493
 protein coding gene Chr17:41760233-41764743 (+)
A/J ENSMUSG00195019508
 protein coding gene Chr17:43262296-43266753 (+)
AKR/J ENSMUSG00220034794
 protein coding gene Chr17:42247729-42252186 (+)
BALB/cJ ENSMUSG00180023516
 protein coding gene Chr17:43012533-43016990 (+)
C3H/HeJ ENSMUSG00175013966
 protein coding gene Chr17:42326442-42330899 (+)
C57BL/6NJ ENSMUSG00215032019
 protein coding gene Chr17:41881715-41886172 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0021663
 protein coding gene Chr17:42961398-42966012 (+)
CAST/EiJ ENSTCUG00005024942
 protein coding gene Chr17:43059878-43064335 (+)
CBA/J ENSMUSG00210032777
 protein coding gene Chr17:42076171-42080628 (+)
DBA/2J ENSMUSG00185027993
 protein coding gene Chr17:44981534-44985991 (+)
FVB/NJ ENSMUSG00205051768
 protein coding gene Chr17:42553891-42558391 (+)
JF1/MsJ ENSUMUG00000013945
 protein coding gene Chr17:44593614-44598048 (+)
LP/J ENSMUSG00230038742
 protein coding gene Chr17:45875168-45879625 (+)
NOD/ShiLtJ ENSMUSG00190015026
 protein coding gene Chr17:41957502-41961936 (+)
NZO/HlLtJ ENSMUSG00225042120
 protein coding gene Chr17:48131123-48135580 (+)
PWK/PhJ ENSLUMG00010033897
 protein coding gene Chr17:41830286-41834753 (+)
SPRET/EiJ ENSMSPG00010030295
 protein coding gene Chr17:42055000-42059108 (+)
WSB/EiJ ENSIUOG00005023374
 protein coding gene Chr17:42927748-42932205 (+)



Homology
more
  • Human Ortholog
    YIPF3, Yip1 domain family member 3
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    YIPF3, Yip1 domain family member 3
  • Synonyms
    C6orf109, dJ337H4.3, FinGER3, KLIP1, Yip5b, YIPFbeta2
  • Links
    NCBI Gene ID: 25844
    UniProt: Q9GZM5

  • Chr Location
    6p21.1; chr6:43511821-43516985 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    8
  • GO References
    4
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    603
  • Tissues
    2
  • cDNA Data
    95
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 28064 NCBI Gene Model | MGI Sequence Detail 4456 C57BL/6J ±  kb
transcript NM_001414050 RefSeq | MGI Sequence Detail 2064 ZRU/MplStud  
polypeptide Q3UDR8 UniProt | EBI | MGI Sequence Detail 347 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 97
    cDNA 96
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGD-MRK-33972
References
more
  • Summaries
    All 29
    Developmental Gene Expression 1
    Gene Ontology 4
    Phenotypes 3
  • Earliest
    J:50869 Ko MSH, et al., Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome. Hum Mol Genet. 1998 Nov;7(12):1967-78
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory