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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Ush1g Usher syndrome 1G MGI:2450757 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs29446549 MPD | dbSNP | MGI SNP Detail | Chr11:115176010 | f | Otop2 : Intron Ush1g : Locus-Region | 1 | SNP | T | C | T | T | C/T | |||||||||||||
| rs29392996 MPD | dbSNP | MGI SNP Detail | Chr11:115176028 | f | Otop2 : Intron Ush1g : Locus-Region | 1 | SNP | G | A | G | G | A/G | |||||||||||||
| rs27047920 MPD | dbSNP | MGI SNP Detail | Chr11:115176200 | f | Otop2 : Intron Ush1g : Locus-Region | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A/G | ||
| rs27047919 MPD | dbSNP | MGI SNP Detail | Chr11:115176376 | f | Otop2 : Intron Ush1g : Locus-Region | 1 | SNP | G | G | G | G | G | C | G | G | G | G | G | G | G | G | G | C/G | ||
| rs27047918 MPD | dbSNP | MGI SNP Detail | Chr11:115176688 | f | Otop2 : Intron Ush1g : mRNA-UTR | 1 | SNP | G | G | G | G | G | T | G | G | T | G | G | G | G | T | T | G/T | ||
| rs27047917 MPD | dbSNP | MGI SNP Detail | Chr11:115176939 | f | Otop2 : Intron Ush1g : mRNA-UTR | 2 | SNP | A | A | G | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A/G |
| rs29387535 MPD | dbSNP | MGI SNP Detail | Chr11:115177808 | f | Otop2 : Intron Ush1g : mRNA-UTR | 1 | SNP | C | A | C | A/C | ||||||||||||||
| rs27047916 MPD | dbSNP | MGI SNP Detail | Chr11:115178589 | f | Otop2 : Intron Ush1g : Intron | 1 | SNP | G | G | G | G | G | A | G | G | A | G | G | G | G | A | G | A/G | ||
| rs27047915 MPD | dbSNP | MGI SNP Detail | Chr11:115180975 | f | Otop2 : Intron Ush1g : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | ||
| rs29450027 MPD | dbSNP | MGI SNP Detail | Chr11:115181028 | f | Otop2 : Intron Ush1g : Intron | 1 | SNP | G | G | G | C | C/G | |||||||||||||
| rs29463756 MPD | dbSNP | MGI SNP Detail | Chr11:115181042 | f | Otop2 : Intron Ush1g : Intron | 1 | SNP | A | A | T | T | A/T | |||||||||||||
| rs29411159 MPD | dbSNP | MGI SNP Detail | Chr11:115181043 | f | Otop2 : Intron Ush1g : Intron | 1 | SNP | A | A | T | T | A/T | |||||||||||||
| rs27047914 MPD | dbSNP | MGI SNP Detail | Chr11:115181356 | f | Otop2 : Intron Ush1g : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | ||
| rs27047913 MPD | dbSNP | MGI SNP Detail | Chr11:115182142 | f | Otop2 : Intron Ush1g : Intron | 1 | SNP | G | G | G | G | G | A | G | G | A | G | G | G | G | A | G | A/G | ||
| rs27047912 MPD | dbSNP | MGI SNP Detail | Chr11:115182153 | f | Otop2 : Intron Ush1g : Intron | 1 | SNP | A | A | A | A | A | C | A | A | A | A | A | A | C | C | A/C | |||
| rs27047911 MPD | dbSNP | MGI SNP Detail | Chr11:115182939 | f | Otop2 : Intron Ush1g : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | A/G | ||
| rs29460959 MPD | dbSNP | MGI SNP Detail | Chr11:115183196 | f | Otop2 : Intron Ush1g : mRNA-UTR | 1 | SNP | C | A | A | A/C | ||||||||||||||
| rs27047910 MPD | dbSNP | MGI SNP Detail | Chr11:115183489 | f | Otop2 : Intron Ush1g : Locus-Region | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | ||
| rs27047909 MPD | dbSNP | MGI SNP Detail | Chr11:115183510 | f | Otop2 : Intron Ush1g : Locus-Region | 1 | SNP | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C/T | |||
| rs27047908 MPD | dbSNP | MGI SNP Detail | Chr11:115183532 | f | Otop2 : Intron Ush1g : Locus-Region | 1 | SNP | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C/T |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 05/08/2013 MGI 5.13 |
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