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Mouse SNPs
Query Results -- Summary
 Symbol
Name
ID
Ush1g
Usher syndrome 1G
MGI:2450757

47 matching SNPs displayed
Full result set is also available in a tab-delimited format.


Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs48578249
MPD | dbSNP | MGI SNP Detail
Chr11:115314603fcub : within coordinates of
Otop2 : Intron
Ush1g : 589 bp downstream of
2SNP  C      C   C  A    A/C
rs29446549
MPD | dbSNP | MGI SNP Detail
Chr11:115314696fcub : within coordinates of
Otop2 : Intron
Ush1g : Locus-Region
2SNP TC   T  T           C/T
rs29392996
MPD | dbSNP | MGI SNP Detail
Chr11:115314714fcub : within coordinates of
Otop2 : Intron
Ush1g : Locus-Region
2SNP GA   G  G           A/G
rs27047920
MPD | dbSNP | MGI SNP Detail
Chr11:115314886fcub : within coordinates of
Otop2 : Intron
Ush1g : Locus-Region
1SNPA AAAA G AAAA AA  AAAA/G
rs27047919
MPD | dbSNP | MGI SNP Detail
Chr11:115315062fcub : within coordinates of
Otop2 : Intron
Ush1g : Locus-Region
1SNPG GGGG C GGGG GG  GGGC/G
rs249440304
MPD | dbSNP | MGI SNP Detail
Chr11:115315194fcub : within coordinates of
Otop2 : Intron
Ush1g : mRNA-UTR
1SNP             T  C    C/T
rs263299372
MPD | dbSNP | MGI SNP Detail
Chr11:115315224fcub : within coordinates of
Otop2 : Intron
Ush1g : mRNA-UTR
1SNP             G  A    A/G
rs227538923
MPD | dbSNP | MGI SNP Detail
Chr11:115315295fcub : within coordinates of
Otop2 : Intron
Ush1g : mRNA-UTR
1SNP             A  G    A/G
rs27047918
MPD | dbSNP | MGI SNP Detail
Chr11:115315374fcub : within coordinates of
Otop2 : Intron
Ush1g : mRNA-UTR
2SNPG GGGG T GGTGTGGG GTTG/T
rs27047917
MPD | dbSNP | MGI SNP Detail
Chr11:115315625fcub : within coordinates of
Otop2 : Intron
Ush1g : mRNA-UTR
3SNPAAGAAGAA AAAA AA  AAAA/G
rs254818832
MPD | dbSNP | MGI SNP Detail
Chr11:115316041fcub : within coordinates of
Otop2 : Intron
Ush1g : mRNA-UTR
1SNP             G  T    G/T
rs223531486
MPD | dbSNP | MGI SNP Detail
Chr11:115316344fcub : within coordinates of
Otop2 : Intron
Ush1g : mRNA-UTR
1SNP             A  G    A/G
rs29387535
MPD | dbSNP | MGI SNP Detail
Chr11:115316494fcub : within coordinates of
Otop2 : Intron
Ush1g : mRNA-UTR
3SNP C    A  C   C  C    A/C
rs27047916
MPD | dbSNP | MGI SNP Detail
Chr11:115317275fcub : within coordinates of
Otop2 : Intron
Ush1g : Intron
1SNPG GGGG A GGAG GG  GAGA/G
rs256242166
MPD | dbSNP | MGI SNP Detail
Chr11:115317611fcub : within coordinates of
Otop2 : Intron
Ush1g : Intron
1SNP             G  A    A/G
rs229932323
MPD | dbSNP | MGI SNP Detail
Chr11:115318050fcub : within coordinates of
Otop2 : Intron
Ush1g : Coding-Synonymous
1SNP             A  G    A/G
rs258256531
MPD | dbSNP | MGI SNP Detail
Chr11:115318785fcub : within coordinates of
Otop2 : Intron
Ush1g : Coding-Synonymous
1SNP             T  C    C/T
rs215516678
MPD | dbSNP | MGI SNP Detail
Chr11:115319139fcub : within coordinates of
Otop2 : Intron
Ush1g : Coding-Synonymous
1SNP             G  A    A/G
rs242956906
MPD | dbSNP | MGI SNP Detail
Chr11:115319527fcub : within coordinates of
Otop2 : Intron
Ush1g : Intron
1SNP             G  A    A/G
rs27047915
MPD | dbSNP | MGI SNP Detail
Chr11:115319661fcub : within coordinates of
Otop2 : Intron
Ush1g : Intron
1SNPT TTTT C TTCT TT  TCTC/T
rs29463756
MPD | dbSNP | MGI SNP Detail
Chr11:115319728fcub : within coordinates of
Otop2 : Intron
Ush1g : Intron
1SNPAAT      T           A/T
rs29411159
MPD | dbSNP | MGI SNP Detail
Chr11:115319730fcub : within coordinates of
Otop2 : Intron
Ush1g : Intron
1SNPAAT      T           A/T
rs52115257
MPD | dbSNP | MGI SNP Detail
Chr11:115319732fcub : within coordinates of
Otop2 : Intron
Ush1g : Intron
1SNP AA      A           A
rs29450027
MPD | dbSNP | MGI SNP Detail
Chr11:115319777fcub : within coordinates of
Otop2 : Intron
Ush1g : Intron
1SNPGGG      C           C/G
rs27047914
MPD | dbSNP | MGI SNP Detail
Chr11:115320042fcub : within coordinates of
Otop2 : Intron
Ush1g : Intron
1SNPG GGGG G GGGG GG  GAGA/G
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs27047913
MPD | dbSNP | MGI SNP Detail
Chr11:115320828fcub : within coordinates of
Otop2 : Intron
Ush1g : Intron
1SNPG GGGG A GGAG GG  GAGA/G
rs27047912
MPD | dbSNP | MGI SNP Detail
Chr11:115320839fcub : within coordinates of
Otop2 : Intron
Ush1g : Intron
2SNPA AAAA C AA ACAAA ACCA/C
rs212655440
MPD | dbSNP | MGI SNP Detail
Chr11:115321217fcub : within coordinates of
Otop2 : Intron
Ush1g : Intron
1SNP             A  G    A/G
rs229626242
MPD | dbSNP | MGI SNP Detail
Chr11:115321397fcub : within coordinates of
Otop2 : Intron
Ush1g : Intron
1SNP             A  G    A/G
rs251689525
MPD | dbSNP | MGI SNP Detail
Chr11:115321523fcub : within coordinates of
Otop2 : Intron
Ush1g : Intron
1SNP             C  T    C/T
rs221741878
MPD | dbSNP | MGI SNP Detail
Chr11:115321540fcub : within coordinates of
Otop2 : Intron
Ush1g : Intron
1SNP             A  T    A/T
rs27047911
MPD | dbSNP | MGI SNP Detail
Chr11:115321625fcub : within coordinates of
Otop2 : Intron
Ush1g : Intron
2SNPG GGGG G GGGGAGGG GGAA/G
rs29460959
MPD | dbSNP | MGI SNP Detail
Chr11:115321882fcub : within coordinates of
Otop2 : Intron
Ush1g : mRNA-UTR
2SNP  C   A  A           A/C
rs27047910
MPD | dbSNP | MGI SNP Detail
Chr11:115322175fcub : within coordinates of
Otop2 : Intron
Ush1g : Locus-Region
2SNPTTTTTT C TTCT TT CTCTC/T
rs27047909
MPD | dbSNP | MGI SNP Detail
Chr11:115322196fcub : within coordinates of
Otop2 : Intron
Ush1g : Locus-Region
2SNPCCCCCC   CCTC CC TCTCC/T
rs27047908
MPD | dbSNP | MGI SNP Detail
Chr11:115322218fcub : within coordinates of
Otop2 : Intron
Ush1g : Locus-Region
2SNPCCCCCC   CCTC CC TCTCC/T
rs47832739
MPD | dbSNP | MGI SNP Detail
Chr11:115322304fcub : within coordinates of
Otop2 : Intron
Ush1g : Locus-Region
1SNP CC      C       T   C/T
rs263134268
MPD | dbSNP | MGI SNP Detail
Chr11:115322468fcub : within coordinates of
Otop2 : Intron
Ush1g : Locus-Region
1SNP             G  T    G/T
rs6198253
MPD | dbSNP | MGI SNP Detail
Chr11:115322578fcub : within coordinates of
Otop2 : Intron
Ush1g : Locus-Region
1SNP      A G            A/G
rs6212238
MPD | dbSNP | MGI SNP Detail
Chr11:115322868fcub : within coordinates of
Otop2 : Intron
Ush1g : Locus-Region
1SNP      A G            A/G
rs6212780
MPD | dbSNP | MGI SNP Detail
Chr11:115322977fcub : within coordinates of
Otop2 : Intron
Ush1g : Locus-Region
2SNPA AAAAAGGAAGA AA  AGAA/G
rs227034296
MPD | dbSNP | MGI SNP Detail
Chr11:115323411fcub : within coordinates of
Otop2 : mRNA-UTR
Ush1g : Locus-Region
1SNP             T  C    C/T
rs241090891
MPD | dbSNP | MGI SNP Detail
Chr11:115323766fcub : within coordinates of
Otop2 : Intron
Ush1g : Locus-Region
1SNP             T  C    C/T
rs254742654
MPD | dbSNP | MGI SNP Detail
Chr11:115323768fcub : within coordinates of
Otop2 : Intron
Ush1g : Locus-Region
1SNP             T  C    C/T
rs27047907
MPD | dbSNP | MGI SNP Detail
Chr11:115323924fcub : within coordinates of
Otop2 : Intron
Ush1g : 1883 bp upstream of
1SNP  TGGT T GGT  TT   TGG/T
rs218127576
MPD | dbSNP | MGI SNP Detail
Chr11:115323926fcub : within coordinates of
Otop2 : Intron
Ush1g : 1885 bp upstream of
1SNP             A  G    A/G
rs27047906
MPD | dbSNP | MGI SNP Detail
Chr11:115324006fcub : within coordinates of
Otop2 : Intron
Ush1g : 1965 bp upstream of
1SNPG GGGG G GGGG GG  GAGA/G

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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory