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Mouse SNPs
Query Results -- Summary
 Symbol
Name
ID
Hps6
Hermansky-Pudlak syndrome 6
MGI:2181763

31 matching SNPs displayed
Full result set is also available in a tab-delimited format.


Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs36562915
MPD | dbSNP | MGI SNP Detail
Chr19:46001608f4930505N22Rik : within coordinates of
Hps6 : Locus-Region
stn : within coordinates of
1SNPA AA     A A GA  A  A/G
rs36913436
MPD | dbSNP | MGI SNP Detail
Chr19:46001649f4930505N22Rik : within coordinates of
Hps6 : Locus-Region
stn : within coordinates of
2SNP  GA        AAAA A  A/G
rs221024034
MPD | dbSNP | MGI SNP Detail
Chr19:46001784f4930505N22Rik : within coordinates of
Hps6 : Locus-Region
stn : within coordinates of
1SNP            G  G    G
rs239712865
MPD | dbSNP | MGI SNP Detail
Chr19:46001814f4930505N22Rik : within coordinates of
Hps6 : Locus-Region
stn : within coordinates of
1SNP            C  C    C
rs251169531
MPD | dbSNP | MGI SNP Detail
Chr19:46002195f4930505N22Rik : within coordinates of
Hps6 : Locus-Region
stn : within coordinates of
1SNP            G  G    G
rs220685032
MPD | dbSNP | MGI SNP Detail
Chr19:46002330f4930505N22Rik : within coordinates of
Hps6 : Locus-Region
stn : within coordinates of
1SNP            G  G    G
rs240803919
MPD | dbSNP | MGI SNP Detail
Chr19:46002419f4930505N22Rik : within coordinates of
Hps6 : Locus-Region
stn : within coordinates of
1SNP            A  A    A
rs266088839
MPD | dbSNP | MGI SNP Detail
Chr19:46002994f4930505N22Rik : within coordinates of
Hps6 : Locus-Region
stn : within coordinates of
1SNP            G  G    G
rs225517445
MPD | dbSNP | MGI SNP Detail
Chr19:46003217f4930505N22Rik : within coordinates of
Hps6 : Locus-Region
stn : within coordinates of
1SNP            A  A    A
rs37632556
MPD | dbSNP | MGI SNP Detail
Chr19:46003315f4930505N22Rik : within coordinates of
Hps6 : Locus-Region
stn : within coordinates of
2SNPT A AT A TA  T   TAAA/T
rs36324201
MPD | dbSNP | MGI SNP Detail
Chr19:46003341f4930505N22Rik : within coordinates of
Hps6 : Locus-Region
stn : within coordinates of
2SNPA A AA A AG GA G AGAA/G
rs37114409
MPD | dbSNP | MGI SNP Detail
Chr19:46003618f4930505N22Rik : within coordinates of
Hps6 : mRNA-UTR
stn : within coordinates of
1SNPG G GG   GA  G     GA/G
rs36753368
MPD | dbSNP | MGI SNP Detail
Chr19:46004079f4930505N22Rik : within coordinates of
Hps6 : Coding-NonSynonymous
stn : within coordinates of
1SNPC C CC   CT  CC  C CC/T
rs37130364
MPD | dbSNP | MGI SNP Detail
Chr19:46004501f4930505N22Rik : within coordinates of
Hps6 : Coding-Synonymous
stn : within coordinates of
1SNPG    G   GA  G     GA/G
rs30887316
MPD | dbSNP | MGI SNP Detail
Chr19:46004688f4930505N22Rik : within coordinates of
Hps6 : Coding-Synonymous
stn : within coordinates of
3SNPC T   T T   C  C    C/T
rs31136547
MPD | dbSNP | MGI SNP Detail
Chr19:46004696f4930505N22Rik : within coordinates of
Hps6 : Coding-Synonymous
stn : within coordinates of
3SNPA G   G G   A  A    A/G
rs30714718
MPD | dbSNP | MGI SNP Detail
Chr19:46004777f4930505N22Rik : within coordinates of
Hps6 : Coding-NonSynonymous
stn : within coordinates of
3SNPG T     T   G  G    G/T
rs255758258
MPD | dbSNP | MGI SNP Detail
Chr19:46004978f4930505N22Rik : within coordinates of
Hps6 : Coding-Synonymous
stn : within coordinates of
1SNP            T  T    T
rs229387438
MPD | dbSNP | MGI SNP Detail
Chr19:46004979f4930505N22Rik : within coordinates of
Hps6 : Coding-Synonymous
stn : within coordinates of
1SNP            T  T    T
rs30808779
MPD | dbSNP | MGI SNP Detail
Chr19:46005092f4930505N22Rik : within coordinates of
Hps6 : Coding-Synonymous
stn : within coordinates of
2SNPAGG     G           A/G
rs30319392
MPD | dbSNP | MGI SNP Detail
Chr19:46005282f4930505N22Rik : within coordinates of
Hps6 : Coding-NonSynonymous
stn : within coordinates of
3SNPGGC  G   GG  G    GCC/G
rs37392654
MPD | dbSNP | MGI SNP Detail
Chr19:46005533f4930505N22Rik : within coordinates of
Hps6 : Coding-Synonymous
stn : within coordinates of
1SNPG    G   GG  GG    AA/G
rs37804653
MPD | dbSNP | MGI SNP Detail
Chr19:46005869f4930505N22Rik : within coordinates of
Hps6 : Coding-Synonymous
stn : within coordinates of
1SNPG    G   GA      G GA/G
rs36277207
MPD | dbSNP | MGI SNP Detail
Chr19:46006080f4930505N22Rik : within coordinates of
Hps6 : mRNA-UTR
stn : within coordinates of
1SNPT    T   TC  TT    TC/T
rs30402947
MPD | dbSNP | MGI SNP Detail
Chr19:46006088f4930505N22Rik : within coordinates of
Hps6 : mRNA-UTR
stn : within coordinates of
2SNP GA     A       G   A/G
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs38480209
MPD | dbSNP | MGI SNP Detail
Chr19:46006527f4930505N22Rik : within coordinates of
Hps6 : Locus-Region
stn : within coordinates of
1SNPC   CC   CT  CC    CC/T
rs36353411
MPD | dbSNP | MGI SNP Detail
Chr19:46006815f4930505N22Rik : within coordinates of
Hps6 : 642 bp downstream of
stn : within coordinates of
1SNPA    A   AG      A AA/G
rs30406496
MPD | dbSNP | MGI SNP Detail
Chr19:46007157f4930505N22Rik : within coordinates of
Hps6 : 984 bp downstream of
stn : within coordinates of
3SNP TC     C   C  C    C/T
rs30705362
MPD | dbSNP | MGI SNP Detail
Chr19:46007659f4930505N22Rik : within coordinates of
Hps6 : 1486 bp downstream of
stn : within coordinates of
3SNP GA   G A   A  A    A/G
rs31210853
MPD | dbSNP | MGI SNP Detail
Chr19:46007685f4930505N22Rik : within coordinates of
Hps6 : 1512 bp downstream of
stn : within coordinates of
2SNP GA   G A   A  A    A/G
rs247381299
MPD | dbSNP | MGI SNP Detail
Chr19:46008052f4930505N22Rik : within coordinates of
Hps6 : 1879 bp downstream of
stn : within coordinates of
1SNP            T  T    T

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory