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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Nlgn3 neuroligin 3 MGI:2444609 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs29079996 MPD | dbSNP | MGI SNP Detail | ChrX:98493445 | f | Med12 : mRNA-UTR Nlgn3 : Locus-Region | 1 | SNP | T | T | T | C | T | T | C/T | |||||||||||
| rs29079995 MPD | dbSNP | MGI SNP Detail | ChrX:98494610 | f | Med12 : Locus-Region Nlgn3 : mRNA-UTR | 1 | SNP | A | A | A | G | A | A | A/G | |||||||||||
| rs29079994 MPD | dbSNP | MGI SNP Detail | ChrX:98497781 | f | Nlgn3 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | ||
| rs29079553 MPD | dbSNP | MGI SNP Detail | ChrX:98498812 | f | Nlgn3 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | A/G | ||
| rs31829537 MPD | dbSNP | MGI SNP Detail | ChrX:98499105 | f | Nlgn3 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | ||
| rs29079552 MPD | dbSNP | MGI SNP Detail | ChrX:98499161 | f | Nlgn3 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C/G | ||
| rs29079551 MPD | dbSNP | MGI SNP Detail | ChrX:98499162 | f | Nlgn3 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | A/G | ||
| rs29079549 MPD | dbSNP | MGI SNP Detail | ChrX:98499718 | f | Nlgn3 : Intron | 1 | SNP | G | G | G | G | G | T | G | G | T | G | G | G | G | G | G/T | |||
| rs31829536 MPD | dbSNP | MGI SNP Detail | ChrX:98499972 | f | Nlgn3 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | A | G | G | G | G | G | G | A/G | ||
| rs31829535 MPD | dbSNP | MGI SNP Detail | ChrX:98500053 | f | Nlgn3 : Intron | 1 | SNP | G | G | G | G | G | T | G | G | T | G | G | G | G | G | G/T | |||
| rs29079548 MPD | dbSNP | MGI SNP Detail | ChrX:98500764 | f | Nlgn3 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | A | G | G | G | G | G | G | A/G | ||
| rs29079547 MPD | dbSNP | MGI SNP Detail | ChrX:98500910 | f | Nlgn3 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | T | C/T | |||
| rs31829534 MPD | dbSNP | MGI SNP Detail | ChrX:98501958 | f | Nlgn3 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | A | A | G | A | A/G | |||||
| rs29079546 MPD | dbSNP | MGI SNP Detail | ChrX:98502856 | f | Nlgn3 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | A/G | ||
| rs29079545 MPD | dbSNP | MGI SNP Detail | ChrX:98502955 | f | Nlgn3 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | A/G | ||
| rs31828783 MPD | dbSNP | MGI SNP Detail | ChrX:98504328 | f | Nlgn3 : Intron | 1 | SNP | T | T | T | T | T | C | T | C | T | T | T | C | T | C/T | ||||
| rs29079544 MPD | dbSNP | MGI SNP Detail | ChrX:98504642 | f | Nlgn3 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | T | T | C/T | ||
| rs29079253 MPD | dbSNP | MGI SNP Detail | ChrX:98506259 | f | Nlgn3 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | T | T | C/T | ||
| rs29079252 MPD | dbSNP | MGI SNP Detail | ChrX:98506295 | f | Nlgn3 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | C | C | C/T | ||
| rs31828782 MPD | dbSNP | MGI SNP Detail | ChrX:98506599 | f | Nlgn3 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | ||
| rs31828781 MPD | dbSNP | MGI SNP Detail | ChrX:98506807 | f | Nlgn3 : Intron | 1 | SNP | A | A | A | A | A | C | A | A | C | A | A | A | A | A | A | A/C | ||
| rs29079251 MPD | dbSNP | MGI SNP Detail | ChrX:98506912 | f | Nlgn3 : Intron | 1 | SNP | G | G | G | G | G | T | G | G | T | G | G | G | G | G | G | G/T | ||
| rs29079250 MPD | dbSNP | MGI SNP Detail | ChrX:98508261 | f | Nlgn3 : Intron | 1 | SNP | T | T | T | T | T | A | T | T | A | T | T | T | T | T | T | A/T | ||
| rs29079249 MPD | dbSNP | MGI SNP Detail | ChrX:98508429 | f | Nlgn3 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | ||
| rs29079248 MPD | dbSNP | MGI SNP Detail | ChrX:98510396 | f | Nlgn3 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A/G | ||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs29079246 MPD | dbSNP | MGI SNP Detail | ChrX:98511104 | f | Nlgn3 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A/G | |||
| rs29079245 MPD | dbSNP | MGI SNP Detail | ChrX:98511477 | f | Nlgn3 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | T | T | C/T | ||
| rs6153467 MPD | dbSNP | MGI SNP Detail | ChrX:98512529 | f | Nlgn3 : Intron | 1 | SNP | G | A | A/G | |||||||||||||||
| rs31828780 MPD | dbSNP | MGI SNP Detail | ChrX:98514001 | f | Nlgn3 : Coding-Synonymous | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | ||
| rs29079244 MPD | dbSNP | MGI SNP Detail | ChrX:98514543 | f | Nlgn3 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | A/G | ||
| rs29083351 MPD | dbSNP | MGI SNP Detail | ChrX:98516074 | f | Nlgn3 : mRNA-UTR | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A/G | ||
| rs29083350 MPD | dbSNP | MGI SNP Detail | ChrX:98516131 | f | Nlgn3 : mRNA-UTR | 1 | SNP | C | C | C | C | T | C | C | T | C | C | C | C | C | C | C/T | |||
| rs31828779 MPD | dbSNP | MGI SNP Detail | ChrX:98516177 | f | Nlgn3 : mRNA-UTR | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | ||
| rs29083349 MPD | dbSNP | MGI SNP Detail | ChrX:98516873 | f | Nlgn3 : Locus-Region | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | T | C/T |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 06/05/2013 MGI 5.13 |
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