About   Help   FAQ
Mouse SNPs
Query Results -- Summary
 Symbol
Name
ID
En2
engrailed 2
MGI:95390

42 matching SNPs displayed
Full result set is also available in a tab-delimited format.


Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs36416639
MPD | dbSNP | MGI SNP Detail
Chr5:28164369fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : Locus-Region
1SNPG GGGG AGGAG GG  GAGA/G
rs36295615
MPD | dbSNP | MGI SNP Detail
Chr5:28165037fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : Locus-Region
1SNPC CCCC CCCTC CC  CTCC/T
rs38239681
MPD | dbSNP | MGI SNP Detail
Chr5:28165049fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : Locus-Region
1SNPC CCCC GCCCC CC  CCCC/G
rs49694088
MPD | dbSNP | MGI SNP Detail
Chr5:28166955fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : Coding-Synonymous
2SNP  A         A  A    A
rs33343964
MPD | dbSNP | MGI SNP Detail
Chr5:28168280fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : Intron
3SNPG G   C C   G  G    C/G
rs33325078
MPD | dbSNP | MGI SNP Detail
Chr5:28168556fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : Intron
Mym : within coordinates of
3SNPG G   A A   G  GG   A/G
rs33436606
MPD | dbSNP | MGI SNP Detail
Chr5:28168691fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : Intron
Mym : within coordinates of
3SNPTTT   C     T  TT   C/T
rs29623044
MPD | dbSNP | MGI SNP Detail
Chr5:28169940fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : Intron
3SNPT T   C     T  T    C/T
rs29562725
MPD | dbSNP | MGI SNP Detail
Chr5:28170051fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : Intron
2SNPT T   G G   T  T    G/T
rs50768306
MPD | dbSNP | MGI SNP Detail
Chr5:28170470fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : mRNA-UTR
2SNP  T     G   T  T    G/T
rs33393570
MPD | dbSNP | MGI SNP Detail
Chr5:28170484fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : mRNA-UTR
3SNPCCC     A   C  C    A/C
rs33379888
MPD | dbSNP | MGI SNP Detail
Chr5:28170663fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : mRNA-UTR
1SNP GG     T           G/T
rs52331151
MPD | dbSNP | MGI SNP Detail
Chr5:28170779fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : mRNA-UTR
2SNP  C     T   C  C    C/T
rs47050240
MPD | dbSNP | MGI SNP Detail
Chr5:28170969fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : mRNA-UTR
2SNP CC         C  C    C
rs46306441
MPD | dbSNP | MGI SNP Detail
Chr5:28171054fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : mRNA-UTR
2SNP  G     C   G  G    C/G
rs48935143
MPD | dbSNP | MGI SNP Detail
Chr5:28171123fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : mRNA-UTR
2SNP GG     A   G  G    A/G
rs46722611
MPD | dbSNP | MGI SNP Detail
Chr5:28171462fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : mRNA-UTR
2SNP AA     G   A  A    A/G
rs46792764
MPD | dbSNP | MGI SNP Detail
Chr5:28171551fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : mRNA-UTR
2SNP CC     T   C  C    C/T
rs218999084
MPD | dbSNP | MGI SNP Detail
Chr5:28171695fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : mRNA-UTR
1SNP            G  G    G
rs49101899
MPD | dbSNP | MGI SNP Detail
Chr5:28171762fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : mRNA-UTR
2SNP GG         G  G    G
rs46226674
MPD | dbSNP | MGI SNP Detail
Chr5:28172349fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : Locus-Region
2SNP G      T   G  G    G/T
rs46063701
MPD | dbSNP | MGI SNP Detail
Chr5:28172366fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : Locus-Region
2SNP T      A   T  T    A/T
rs48660285
MPD | dbSNP | MGI SNP Detail
Chr5:28172446fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : Locus-Region
1SNP T      C           C/T
rs47159979
MPD | dbSNP | MGI SNP Detail
Chr5:28172506fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : Locus-Region
2SNP C      T   C  C    C/T
rs46573647
MPD | dbSNP | MGI SNP Detail
Chr5:28172552fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : Locus-Region
2SNP TT     C   T  T    C/T
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs48211212
MPD | dbSNP | MGI SNP Detail
Chr5:28172584fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : Locus-Region
2SNP AA     G   A  A    A/G
rs49324135
MPD | dbSNP | MGI SNP Detail
Chr5:28172610fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : Locus-Region
2SNP AA     G   A  A    A/G
rs49469209
MPD | dbSNP | MGI SNP Detail
Chr5:28172611fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : Locus-Region
2SNP TT     A   T  T    A/T
rs46023266
MPD | dbSNP | MGI SNP Detail
Chr5:28172763fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : 597 bp downstream of
2SNP AA     T   A  A    A/T
rs48255129
MPD | dbSNP | MGI SNP Detail
Chr5:28172779fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : 613 bp downstream of
2SNP AA     G   A  A    A/G
rs51838771
MPD | dbSNP | MGI SNP Detail
Chr5:28172898fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : 732 bp downstream of
2SNP AA     G   A  A    A/G
rs46195711
MPD | dbSNP | MGI SNP Detail
Chr5:28172972fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : 806 bp downstream of
2SNP CC     T   C  C    C/T
rs50264258
MPD | dbSNP | MGI SNP Detail
Chr5:28173157fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : 991 bp downstream of
2SNP CC     A   C  C    A/C
rs47933803
MPD | dbSNP | MGI SNP Detail
Chr5:28173262fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : 1096 bp downstream of
2SNP GG     A   G  G    A/G
rs49847887
MPD | dbSNP | MGI SNP Detail
Chr5:28173321fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : 1155 bp downstream of
2SNP CC     T   C  C    C/T
rs33460033
MPD | dbSNP | MGI SNP Detail
Chr5:28173410fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : 1244 bp downstream of
3SNP GG   T T   G  G    G/T
rs33236390
MPD | dbSNP | MGI SNP Detail
Chr5:28173421fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : 1255 bp downstream of
3SNPAAA   C C   A  A    A/C
rs29629529
MPD | dbSNP | MGI SNP Detail
Chr5:28173747fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : 1581 bp downstream of
2SNP TT   C C   T  T    C/T
rs33586901
MPD | dbSNP | MGI SNP Detail
Chr5:28173762fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : 1596 bp downstream of
2SNP TT   C C   T  T    C/T
rs33482066
MPD | dbSNP | MGI SNP Detail
Chr5:28173920fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : 1754 bp downstream of
2SNP C    A     C  C    A/C
rs33392827
MPD | dbSNP | MGI SNP Detail
Chr5:28174013fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : 1847 bp downstream of
2SNP G    C     G  G    C/G
rs257077119
MPD | dbSNP | MGI SNP Detail
Chr5:28174034fDel(5D5Mit73-D5Mit351)1J : within coordinates of
Del(5D5Mit73-D5Mit351)5Jcs : within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs : within coordinates of
En2 : 1868 bp downstream of
1SNP            C  C    C

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
08/19/2014
MGI 5.19
The Jackson Laboratory