|
Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
|
Symbol Name ID |
Pex6 peroxisomal biogenesis factor 6 MGI:2385054 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs33177879 MPD | dbSNP | MGI SNP Detail | Chr17:46847195 | f | Pex6 : Locus-Region | 1 | SNP | C | T | T | T | C/T | |||||||||||||||||||||||||
| rs6154082 MPD | dbSNP | MGI SNP Detail | Chr17:46847787 | f | Pex6 : Locus-Region | 1 | SNP | T | A | A/T | |||||||||||||||||||||||||||
| rs6154613 MPD | dbSNP | MGI SNP Detail | Chr17:46847867 | f | Pex6 : Locus-Region | 1 | SNP | G | A | A/G | |||||||||||||||||||||||||||
| rs33713981 MPD | dbSNP | MGI SNP Detail | Chr17:46849661 | f | Pex6 : Intron | 1 | SNP | T | C | C | C | C/T | |||||||||||||||||||||||||
| rs33110768 MPD | dbSNP | MGI SNP Detail | Chr17:46849670 | f | Pex6 : Intron | 1 | SNP | T | C | C | C | C/T | |||||||||||||||||||||||||
| rs33135530 MPD | dbSNP | MGI SNP Detail | Chr17:46851184 | f | Pex6 : Intron | 1 | SNP | G | G | A | A | A/G | |||||||||||||||||||||||||
| rs33280788 MPD | dbSNP | MGI SNP Detail | Chr17:46851668 | f | Pex6 : Intron | 1 | SNP | C | C | T | T | T | C/T | ||||||||||||||||||||||||
| rs33594211 MPD | dbSNP | MGI SNP Detail | Chr17:46851691 | f | Pex6 : Intron | 1 | SNP | A | A | G | G | G | A/G | ||||||||||||||||||||||||
| rs29534084 MPD | dbSNP | MGI SNP Detail | Chr17:46851759 | f | Pex6 : Intron | 1 | SNP | G | G | C | C | C | C/G | ||||||||||||||||||||||||
| rs33701460 MPD | dbSNP | MGI SNP Detail | Chr17:46851946 | f | Pex6 : Intron | 1 | SNP | A | A | G | G | G | A/G | ||||||||||||||||||||||||
| rs33650109 MPD | dbSNP | MGI SNP Detail | Chr17:46852030 | f | Pex6 : Intron | 1 | SNP | C | C | A | A | A/C | |||||||||||||||||||||||||
| rs33388470 MPD | dbSNP | MGI SNP Detail | Chr17:46852241 | f | Pex6 : Intron | 1 | SNP | C | C | T | C/T | ||||||||||||||||||||||||||
| rs33336181 MPD | dbSNP | MGI SNP Detail | Chr17:46853940 | f | Pex6 : Intron | 1 | SNP | T | T | A | A | A | A/T | ||||||||||||||||||||||||
| rs33265779 MPD | dbSNP | MGI SNP Detail | Chr17:46855572 | f | Pex6 : Intron | 1 | SNP | A | G | G | A/G | ||||||||||||||||||||||||||
| rs33657798 MPD | dbSNP | MGI SNP Detail | Chr17:46855572 | f | Pex6 : Intron | 1 | SNP | G | A | A | A/G | ||||||||||||||||||||||||||
| rs33704356 MPD | dbSNP | MGI SNP Detail | Chr17:46857612 | f | Pex6 : Intron | 1 | SNP | G | G | A | A | A | A/G | ||||||||||||||||||||||||
| rs33348399 MPD | dbSNP | MGI SNP Detail | Chr17:46857961 | f | Pex6 : Intron | 1 | SNP | G | A | A | A | A/G | |||||||||||||||||||||||||
| rs33558539 MPD | dbSNP | MGI SNP Detail | Chr17:46858128 | f | Pex6 : Intron | 1 | SNP | G | G | A | A | A | A/G | ||||||||||||||||||||||||
| rs33586655 MPD | dbSNP | MGI SNP Detail | Chr17:46858695 | f | Pex6 : Coding-NonSynonymous | 1 | SNP | A | A | G | G | G | A/G | ||||||||||||||||||||||||
| rs33644100 MPD | dbSNP | MGI SNP Detail | Chr17:46858720 | f | Pex6 : Coding-Synonymous | 1 | SNP | C | C | G | G | G | C/G | ||||||||||||||||||||||||
| rs50652930 MPD | dbSNP | MGI SNP Detail | Chr17:46858908 | f | Pex6 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | ||||||||||||||
| rs46253154 MPD | dbSNP | MGI SNP Detail | Chr17:46859423 | f | Pex6 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | ||||||||||||||
| rs45950107 MPD | dbSNP | MGI SNP Detail | Chr17:46860066 | f | Pex6 : Coding-NonSynonymous | 1 | SNP | C | C | C | C | C | C | C | C | G | G | C | C | G | G | C | C/G | ||||||||||||||
| rs29499924 MPD | dbSNP | MGI SNP Detail | Chr17:46860232 | f | Pex6 : Intron | 1 | SNP | C | C | T | T | T | C/T | ||||||||||||||||||||||||
| rs33437593 MPD | dbSNP | MGI SNP Detail | Chr17:46860604 | f | Pex6 : Intron | 1 | SNP | C | C | T | T | C/T | |||||||||||||||||||||||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs48294335 MPD | dbSNP | MGI SNP Detail | Chr17:46860899 | f | Gnmt : Locus-Region Pex6 : Coding-Synonymous | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | T | C/T | |||||||||||||||
| rs33162463 MPD | dbSNP | MGI SNP Detail | Chr17:46861459 | f | Gnmt : Locus-Region Pex6 : Intron | 1 | SNP | A | G | G | G | A/G | |||||||||||||||||||||||||
| rs33412576 MPD | dbSNP | MGI SNP Detail | Chr17:46861666 | f | Gnmt : Locus-Region Pex6 : Intron | 1 | SNP | A | A | G | G | G | A/G | ||||||||||||||||||||||||
| rs8261539 MPD | dbSNP | MGI SNP Detail | Chr17:46862192 | r | Gnmt : Locus-Region Pex6 : Coding-Synonymous | 1 | SNP | A | A | A | A | G | A | G | G | G | A | A | A | G | A/G | ||||||||||||||||
| rs8261538 MPD | dbSNP | MGI SNP Detail | Chr17:46862246 | r | Gnmt : Locus-Region Pex6 : Coding-Synonymous | 1 | SNP | G | G | G | G | G | G | G | A | G | G | G | G | G | A/G | ||||||||||||||||
| rs8261537 MPD | dbSNP | MGI SNP Detail | Chr17:46862264 | r | Gnmt : Locus-Region Pex6 : Coding-Synonymous | 2 | SNP | G | G | G | G | G | G | A | G | G | G | G | G | G | T | G | G | G | G | G | G | G | G | T | A/G/T | ||||||
| rs8261536 MPD | dbSNP | MGI SNP Detail | Chr17:46862444 | r | Gnmt : Locus-Region Pex6 : mRNA-UTR | 1 | SNP | C | C | C | C | C | A | C | C | C | C | A/C | |||||||||||||||||||
| rs8261540 MPD | dbSNP | MGI SNP Detail | Chr17:46862490 | f | Gnmt : Locus-Region Pex6 : mRNA-UTR | 1 | SNP | A | A | A | A | A | A | A | G | A | A | A | A | A | A/G | ||||||||||||||||
| rs33252757 MPD | dbSNP | MGI SNP Detail | Chr17:46862549 | f | Gnmt : Locus-Region Pex6 : Locus-Region | 1 | SNP | G | A | A | A/G | ||||||||||||||||||||||||||
| rs8237594 MPD | dbSNP | MGI SNP Detail | Chr17:46862665 | f | Gnmt : mRNA-UTR Pex6 : Locus-Region | 2 | SNP | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C/T | ||||||||||||||
| rs8237595 MPD | dbSNP | MGI SNP Detail | Chr17:46862707 | f | Gnmt : mRNA-UTR Pex6 : Locus-Region | 2 | SNP | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | A/G | ||||||||||||||
| rs8237596 MPD | dbSNP | MGI SNP Detail | Chr17:46862725 | f | Gnmt : mRNA-UTR Pex6 : Locus-Region | 2 | SNP | T | T | T | T | T | T | T | T | T | G | T | T | T | T | T | G/T | ||||||||||||||
| rs8261546 MPD | dbSNP | MGI SNP Detail | Chr17:46862744 | f | Gnmt : mRNA-UTR Pex6 : Locus-Region | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | A/G | ||||||||||||||||||
| rs8236430 MPD | dbSNP | MGI SNP Detail | Chr17:46862791 | f | Gnmt : Coding-Synonymous Pex6 : Locus-Region | 3 | SNP | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A/G | |||||
| rs8261543 MPD | dbSNP | MGI SNP Detail | Chr17:46862791 | r | Gnmt : Coding-Synonymous Pex6 : Locus-Region | 1 | SNP | C | T | C | C | C | C | C/T | |||||||||||||||||||||||
| rs8236431 MPD | dbSNP | MGI SNP Detail | Chr17:46862794 | f | Gnmt : Coding-Synonymous Pex6 : Locus-Region | 4 | SNP | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | A/G | ||||||||||||
| rs8261541 MPD | dbSNP | MGI SNP Detail | Chr17:46862847 | r | Gnmt : Coding-NonSynonymous Pex6 : Locus-Region | 3 | SNP | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A/G |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
||
|
Citing These Resources Funding Information Warranty Disclaimer & Copyright Notice Send questions and comments to User Support. |
last database update 05/08/2013 MGI 5.13 |
|
|
|
||
Analysis Tools