About   Help   FAQ
Mouse SNPs
Query Results -- Summary
 Symbol
Name
ID
Vipas39
VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog
MGI:2144805

97 matching SNPs displayed
Full result set is also available in a tab-delimited format.


Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs47418194
MPD | dbSNP | MGI SNP Detail
Chr12:87237049fNoxred1 : Intron
Vipas39 : 1826 bp downstream of
1SNPG GGGG C GGGGGG GGGC/G
rs49473132
MPD | dbSNP | MGI SNP Detail
Chr12:87238083fNoxred1 : Intron
Vipas39 : 792 bp downstream of
1SNPA AAAA T AATAAA ATAA/T
rs48041530
MPD | dbSNP | MGI SNP Detail
Chr12:87239162fNoxred1 : Locus-Region
Vipas39 : mRNA-UTR
2SNPC CCCC C CCACCCACACA/C
rs48544863
MPD | dbSNP | MGI SNP Detail
Chr12:87239187fNoxred1 : Locus-Region
Vipas39 : mRNA-UTR
1SNPG GGGG A GGGGGG GGGA/G
rs46492514
MPD | dbSNP | MGI SNP Detail
Chr12:87239218fNoxred1 : Locus-Region
Vipas39 : mRNA-UTR
2SNPG GGGG G GGGAGGGGGGA/G
rs13472533
MPD | dbSNP | MGI SNP Detail
Chr12:87239329rNoxred1 : Locus-Region
Vipas39 : mRNA-UTR
1SNPG GGGG G GTGGGG GGGG/T
rs50975849
MPD | dbSNP | MGI SNP Detail
Chr12:87239392fNoxred1 : Locus-Region
Vipas39 : mRNA-UTR
1SNP  G                G
rs46897932
MPD | dbSNP | MGI SNP Detail
Chr12:87239640fNoxred1 : Locus-Region
Vipas39 : mRNA-UTR
1SNP CC            T   C/T
rs48905360
MPD | dbSNP | MGI SNP Detail
Chr12:87240729fVipas39 : Intron1SNPA AAAA   AAATAA AAAA/T
rs50058297
MPD | dbSNP | MGI SNP Detail
Chr12:87241410fVipas39 : Intron1SNPG GGGG   GGTGGG G GG/T
rs47726564
MPD | dbSNP | MGI SNP Detail
Chr12:87241525fVipas39 : Intron1SNPC CCCC T CTTTCC CTTC/T
rs50794773
MPD | dbSNP | MGI SNP Detail
Chr12:87242291fVipas39 : Intron1SNPT TTTT   TTC TT TCTC/T
rs51639114
MPD | dbSNP | MGI SNP Detail
Chr12:87242336fVipas39 : Intron2SNPT TTTT   TC  TT T CC/T
rs49826068
MPD | dbSNP | MGI SNP Detail
Chr12:87242428fVipas39 : Intron1SNPC CCCC   CCT CC CCCC/T
rs46473649
MPD | dbSNP | MGI SNP Detail
Chr12:87242906fVipas39 : Intron2SNPAAAAAA   AAT AA ATAA/T
rs51738542
MPD | dbSNP | MGI SNP Detail
Chr12:87242993fVipas39 : Intron2SNPCCCCCC   CCG CC CGCC/G
rs6265833
MPD | dbSNP | MGI SNP Detail
Chr12:87244129fVipas39 : Intron2SNPT TTTTTTCTTCTTT TCTC/T
rs6266453
MPD | dbSNP | MGI SNP Detail
Chr12:87244244fVipas39 : Intron2SNPC CCCCCCTCCT CC CTCC/T
rs47095899
MPD | dbSNP | MGI SNP Detail
Chr12:87244331fVipas39 : Intron1SNPC CCCC   CCTCCC CTCC/T
rs51981634
MPD | dbSNP | MGI SNP Detail
Chr12:87244404fVipas39 : Intron1SNPG GGGG   GGA GG GAGA/G
rs50336030
MPD | dbSNP | MGI SNP Detail
Chr12:87244479fVipas39 : Coding-Synonymous1SNPG GGGG G GGA GG GAGA/G
rs49689531
MPD | dbSNP | MGI SNP Detail
Chr12:87244711fVipas39 : Intron1SNPG GGGG G GGA GG GAGA/G
rs45853114
MPD | dbSNP | MGI SNP Detail
Chr12:87245893fVipas39 : Intron1SNPG GGGG   GGT GG GTGG/T
rs47033747
MPD | dbSNP | MGI SNP Detail
Chr12:87246742fVipas39 : Intron1SNPG GGGG   GGC GG GCGC/G
rs48347187
MPD | dbSNP | MGI SNP Detail
Chr12:87246774fVipas39 : Intron1SNPC CCCC   CCT CC CTCC/T
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs46985740
MPD | dbSNP | MGI SNP Detail
Chr12:87246975fVipas39 : Intron1SNPC CCCC C CCT CC CTCC/T
rs52117787
MPD | dbSNP | MGI SNP Detail
Chr12:87248046fVipas39 : Intron1SNP         A         A
rs51643567
MPD | dbSNP | MGI SNP Detail
Chr12:87248120fVipas39 : Intron1SNP T       T         T
rs50423425
MPD | dbSNP | MGI SNP Detail
Chr12:87248583fVipas39 : Intron1SNP A                 A
rs48507128
MPD | dbSNP | MGI SNP Detail
Chr12:87248716fVipas39 : Intron1SNPT TTTT T TTCTTT TTTC/T
rs52156748
MPD | dbSNP | MGI SNP Detail
Chr12:87249717fVipas39 : Intron1SNP GG                G
rs50925379
MPD | dbSNP | MGI SNP Detail
Chr12:87250597fVipas39 : Intron1SNPC CCCC C CACCCC CCAA/C
rs46249517
MPD | dbSNP | MGI SNP Detail
Chr12:87250669fVipas39 : Intron1SNPG GGGG G GGAGGG GAGA/G
rs51067635
MPD | dbSNP | MGI SNP Detail
Chr12:87250853fVipas39 : Intron1SNPT TTTT T TTTATT TTTA/T
rs47656095
MPD | dbSNP | MGI SNP Detail
Chr12:87250968fVipas39 : Intron1SNPT TTTT C TTTCTT TTTC/T
rs49967864
MPD | dbSNP | MGI SNP Detail
Chr12:87251344fVipas39 : Intron1SNPA AAAA A AAAAAA AGAA/G
rs46382595
MPD | dbSNP | MGI SNP Detail
Chr12:87251362fVipas39 : Intron1SNPT TTTT C TTTTTT TCTC/T
rs51398109
MPD | dbSNP | MGI SNP Detail
Chr12:87252585fVipas39 : Intron1SNPA AAAA A AACAAA ACAA/C
rs51594224
MPD | dbSNP | MGI SNP Detail
Chr12:87252822fVipas39 : Intron1SNPG GGGG G GGGCGG GGGC/G
rs46492261
MPD | dbSNP | MGI SNP Detail
Chr12:87252853fVipas39 : Intron1SNPA AAAA A AATAAA ATAA/T
rs49946522
MPD | dbSNP | MGI SNP Detail
Chr12:87253097fVipas39 : Intron1SNPC CCCC T CCCCCC CCCC/T
rs46230061
MPD | dbSNP | MGI SNP Detail
Chr12:87253098fVipas39 : Intron1SNPG GGGG G GGGTGG GGGG/T
rs51304905
MPD | dbSNP | MGI SNP Detail
Chr12:87253442fVipas39 : Intron1SNPA AAAA G AAGGAA AGAA/G
rs51515484
MPD | dbSNP | MGI SNP Detail
Chr12:87254289fVipas39 : Intron1SNPG GGGG G GGAGGG GAGA/G
rs51631185
MPD | dbSNP | MGI SNP Detail
Chr12:87255515fVipas39 : Intron1SNP  GGGG G GGAGGG GAGA/G
rs47043246
MPD | dbSNP | MGI SNP Detail
Chr12:87255896fVipas39 : Intron1SNPG GGGG G GGGAGG GGGA/G
rs52377060
MPD | dbSNP | MGI SNP Detail
Chr12:87256606fVipas39 : Intron1SNPG GGGG T GGTGGG GTGG/T
rs52387937
MPD | dbSNP | MGI SNP Detail
Chr12:87256636fVipas39 : Intron1SNPA AAAA C AACCAA ACAA/C
rs49126097
MPD | dbSNP | MGI SNP Detail
Chr12:87257406fVipas39 : Intron1SNPG GGGG G GGAGGG GAGA/G
rs50489714
MPD | dbSNP | MGI SNP Detail
Chr12:87257530fVipas39 : Intron1SNPC CCCC C CCTCCC CCCC/T
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs50357461
MPD | dbSNP | MGI SNP Detail
Chr12:87257710fVipas39 : Intron1SNP TT      T         T
rs50101038
MPD | dbSNP | MGI SNP Detail
Chr12:87257861fVipas39 : Intron1SNP AA      A         A
rs47379330
MPD | dbSNP | MGI SNP Detail
Chr12:87258068fVipas39 : Intron1SNP TT      T     T   T
rs51286061
MPD | dbSNP | MGI SNP Detail
Chr12:87258678fVipas39 : Intron1SNPC CCCC C CCCTCC CCCC/T
rs47838544
MPD | dbSNP | MGI SNP Detail
Chr12:87259177fVipas39 : Coding-NonSynonymous1SNPT TTTT T TTTCTT TTTC/T
rs48956969
MPD | dbSNP | MGI SNP Detail
Chr12:87259259fVipas39 : Intron1SNPT TTTT C TTTTTT TTTC/T
rs49676246
MPD | dbSNP | MGI SNP Detail
Chr12:87259326fVipas39 : Intron1SNPA AAAA A AAGAAA AGAA/G
rs48828272
MPD | dbSNP | MGI SNP Detail
Chr12:87259710fVipas39 : Intron1SNPT TTTT   TTG TT TGTG/T
rs50209216
MPD | dbSNP | MGI SNP Detail
Chr12:87260496fVipas39 : Intron1SNPT TTTT C TTCCTT TCTC/T
rs51728105
MPD | dbSNP | MGI SNP Detail
Chr12:87260741fVipas39 : Intron1SNPG GGGG G GGGAGG GGGA/G
rs47768541
MPD | dbSNP | MGI SNP Detail
Chr12:87260816fVipas39 : Intron1SNPG GGGG G GGCGGG GCGC/G
rs47605152
MPD | dbSNP | MGI SNP Detail
Chr12:87260991fVipas39 : Intron1SNPC CCCC T CCCTCC CCCC/T
rs46357252
MPD | dbSNP | MGI SNP Detail
Chr12:87261038fVipas39 : Intron1SNPA AAAA G AAGGAA AGAA/G
rs49576493
MPD | dbSNP | MGI SNP Detail
Chr12:87262641fVipas39 : Intron1SNPG GGGG G GGAGGG GAGA/G
rs46447739
MPD | dbSNP | MGI SNP Detail
Chr12:87262651fVipas39 : Intron1SNPC CCCC A CCCCCC CCCA/C
rs47146308
MPD | dbSNP | MGI SNP Detail
Chr12:87263265fVipas39 : Intron1SNPA AAAA G AAGGAA AGAA/G
rs46128452
MPD | dbSNP | MGI SNP Detail
Chr12:87263328fVipas39 : Intron1SNPG GGGG   GGGGGG GGAA/G
rs45791880
MPD | dbSNP | MGI SNP Detail
Chr12:87263338fVipas39 : Intron1SNPA AAAA G AAAGAA AAAA/G
rs48961608
MPD | dbSNP | MGI SNP Detail
Chr12:87263795fVipas39 : Intron1SNPC CCCC T CCCTCC CCCC/T
rs48273091
MPD | dbSNP | MGI SNP Detail
Chr12:87263887fVipas39 : Intron1SNPA AAAA G AAAGAA AAAA/G
rs46389517
MPD | dbSNP | MGI SNP Detail
Chr12:87263920fVipas39 : Coding-Synonymous1SNPA AAAA G AAAGAA AAAA/G
rs50494828
MPD | dbSNP | MGI SNP Detail
Chr12:87264055fVipas39 : Intron1SNPT TTTT C TTTCTT TTTC/T
rs46687164
MPD | dbSNP | MGI SNP Detail
Chr12:87264131fVipas39 : mRNA-UTR
Vipas39 : Intron
1SNPT TTTT C TTTCTT TTTC/T
rs45900071
MPD | dbSNP | MGI SNP Detail
Chr12:87264519fVipas39 : Locus-Region
Vipas39 : Intron
1SNP   GGG   GGC GG G GC/G
rs46184940
MPD | dbSNP | MGI SNP Detail
Chr12:87264713fVipas39 : Intron
Vipas39 : Locus-Region
1SNPT TTTT C TTCCTT TCTC/T
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs51282941
MPD | dbSNP | MGI SNP Detail
Chr12:87264867fAhsa1 : Intron
Vipas39 : Intron
Vipas39 : Locus-Region
1SNPG GGGG A GGGAGG GGGA/G
rs50653089
MPD | dbSNP | MGI SNP Detail
Chr12:87264923fAhsa1 : Intron
Vipas39 : Locus-Region
Vipas39 : Intron
2SNPG GGGG   GGGAGG GGGA/G
rs48131589
MPD | dbSNP | MGI SNP Detail
Chr12:87265029fAhsa1 : Intron
Vipas39 : Intron
Vipas39 : Locus-Region
1SNP  G      G         G
rs46251753
MPD | dbSNP | MGI SNP Detail
Chr12:87265047fAhsa1 : Intron
Vipas39 : Intron
Vipas39 : Locus-Region
1SNP  A      A         A
rs48282079
MPD | dbSNP | MGI SNP Detail
Chr12:87265076fAhsa1 : Intron
Vipas39 : Locus-Region
Vipas39 : Intron
1SNP  A                A
rs47191069
MPD | dbSNP | MGI SNP Detail
Chr12:87265117fAhsa1 : Intron
Vipas39 : Locus-Region
Vipas39 : Intron
2SNPT TTTT   TTAATT TATA/T
rs50491346
MPD | dbSNP | MGI SNP Detail
Chr12:87265256fAhsa1 : Intron
Vipas39 : Intron
Vipas39 : Locus-Region
1SNP GG      G     G   G
rs46417749
MPD | dbSNP | MGI SNP Detail
Chr12:87265370fAhsa1 : Intron
Vipas39 : Locus-Region
Vipas39 : Intron
2SNPTTTTTT   TTCTTTCTCTC/T
rs49124826
MPD | dbSNP | MGI SNP Detail
Chr12:87265440fAhsa1 : Intron
Vipas39 : Intron
Vipas39 : Locus-Region
1SNPA AAAA A AAATAA AAAA/T
rs48944237
MPD | dbSNP | MGI SNP Detail
Chr12:87265482fAhsa1 : Intron
Vipas39 : Intron
Vipas39 : Locus-Region
1SNPC CCCC G CCGGCC CGCC/G
rs47517045
MPD | dbSNP | MGI SNP Detail
Chr12:87265595fAhsa1 : Intron
Vipas39 : Intron
Vipas39 : Locus-Region
1SNPC CCCC T CCTTCC CTCC/T
rs48895603
MPD | dbSNP | MGI SNP Detail
Chr12:87265712fAhsa1 : Intron
Vipas39 : Locus-Region
Vipas39 : Intron
1SNPC CCCC C CCCTCC CCCC/T
rs49044470
MPD | dbSNP | MGI SNP Detail
Chr12:87266022fAhsa1 : Intron
Vipas39 : Locus-Region
Vipas39 : Intron
1SNPG GGGG A GGAGGG GAGA/G
rs48938785
MPD | dbSNP | MGI SNP Detail
Chr12:87266058fAhsa1 : Intron
Vipas39 : Intron
Vipas39 : Locus-Region
1SNPA AAAA G AAGGAA AGAA/G
rs51980681
MPD | dbSNP | MGI SNP Detail
Chr12:87266288fAhsa1 : Intron
Vipas39 : Locus-Region
1SNPC CCCC C CCGCCC CGCC/G
rs50608638
MPD | dbSNP | MGI SNP Detail
Chr12:87266574fAhsa1 : Intron
Vipas39 : Locus-Region
1SNPA AAAA A AAAGAA AAAA/G
rs47206683
MPD | dbSNP | MGI SNP Detail
Chr12:87266586fAhsa1 : Intron
Vipas39 : Locus-Region
1SNPA AAAA A AAGAAA AGAA/G
rs49174029
MPD | dbSNP | MGI SNP Detail
Chr12:87267395fAhsa1 : Intron
Vipas39 : Locus-Region
1SNPG GGGG G GGAGGG GAGA/G
rs46266355
MPD | dbSNP | MGI SNP Detail
Chr12:87267432fAhsa1 : Intron
Vipas39 : Locus-Region
1SNPC CCCC C CCTCCC CCCC/T
rs47031228
MPD | dbSNP | MGI SNP Detail
Chr12:87267687fAhsa1 : Intron
Vipas39 : Locus-Region
1SNPT TTTT T TTCTTT TCTC/T
rs48602439
MPD | dbSNP | MGI SNP Detail
Chr12:87267743fAhsa1 : Intron
Vipas39 : Locus-Region
1SNPA AAAA G AAGGAA AGGA/G
rs48344904
MPD | dbSNP | MGI SNP Detail
Chr12:87268128fAhsa1 : Intron
Vipas39 : Locus-Region
1SNPG GGGG G GGAGGG GAGA/G

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
07/01/2014
MGI 5.18
The Jackson Laboratory