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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Vipas39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog MGI:2144805 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs47418194 MPD | dbSNP | MGI SNP Detail | Chr12:88577999 | f | Noxred1 : Intron Vipas39 : Locus-Region | 1 | SNP | G | G | G | G | G | C | G | G | G | G | G | G | G | G | G | C/G | ||
| rs49473132 MPD | dbSNP | MGI SNP Detail | Chr12:88579033 | f | Noxred1 : Intron Vipas39 : Locus-Region | 1 | SNP | A | A | A | A | A | T | A | A | T | A | A | A | A | T | A | A/T | ||
| rs48041530 MPD | dbSNP | MGI SNP Detail | Chr12:88580112 | f | Vipas39 : mRNA-UTR | 1 | SNP | C | C | C | C | C | C | C | C | A | C | C | C | C | A | C | A/C | ||
| rs48544863 MPD | dbSNP | MGI SNP Detail | Chr12:88580137 | f | Vipas39 : mRNA-UTR | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | ||
| rs46492514 MPD | dbSNP | MGI SNP Detail | Chr12:88580168 | f | Vipas39 : mRNA-UTR | 1 | SNP | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | A/G | ||
| rs13472533 MPD | dbSNP | MGI SNP Detail | Chr12:88580279 | r | Vipas39 : mRNA-UTR | 1 | SNP | G | G | G | G | G | G | G | T | G | G | G | G | G | G | G | G/T | ||
| rs48905360 MPD | dbSNP | MGI SNP Detail | Chr12:88581679 | f | Vipas39 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | T | A | A | A | A | A | A/T | |||
| rs50058297 MPD | dbSNP | MGI SNP Detail | Chr12:88582360 | f | Vipas39 : Intron | 1 | SNP | G | G | G | G | G | G | G | T | G | G | G | G | G | G/T | ||||
| rs47726564 MPD | dbSNP | MGI SNP Detail | Chr12:88582475 | f | Vipas39 : Intron | 1 | SNP | C | C | C | C | C | T | C | T | T | T | C | C | C | T | T | C/T | ||
| rs50794773 MPD | dbSNP | MGI SNP Detail | Chr12:88583241 | f | Vipas39 : Intron | 1 | SNP | T | T | T | T | T | T | T | C | T | T | T | C | T | C/T | ||||
| rs51639114 MPD | dbSNP | MGI SNP Detail | Chr12:88583286 | f | Vipas39 : Intron | 1 | SNP | T | T | T | T | T | T | C | T | T | T | C | C/T | ||||||
| rs49826068 MPD | dbSNP | MGI SNP Detail | Chr12:88583378 | f | Vipas39 : Intron | 1 | SNP | C | C | C | C | C | C | C | T | C | C | C | C | C | C/T | ||||
| rs46473649 MPD | dbSNP | MGI SNP Detail | Chr12:88583856 | f | Vipas39 : Intron | 1 | SNP | A | A | A | A | A | A | A | T | A | A | A | T | A | A/T | ||||
| rs51738542 MPD | dbSNP | MGI SNP Detail | Chr12:88583943 | f | Vipas39 : Intron | 1 | SNP | C | C | C | C | C | C | C | G | C | C | C | G | C | C/G | ||||
| rs6265833 MPD | dbSNP | MGI SNP Detail | Chr12:88585079 | f | Vipas39 : Intron | 2 | SNP | T | T | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T |
| rs6266453 MPD | dbSNP | MGI SNP Detail | Chr12:88585194 | f | Vipas39 : Intron | 2 | SNP | C | C | C | C | C | C | C | T | C | C | T | C | C | C | T | C | C/T | |
| rs47095899 MPD | dbSNP | MGI SNP Detail | Chr12:88585281 | f | Vipas39 : Intron | 1 | SNP | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C/T | |||
| rs51981634 MPD | dbSNP | MGI SNP Detail | Chr12:88585354 | f | Vipas39 : Intron | 1 | SNP | G | G | G | G | G | G | G | A | G | G | G | A | G | A/G | ||||
| rs50336030 MPD | dbSNP | MGI SNP Detail | Chr12:88585429 | f | Vipas39 : Coding-Synonymous | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | A | G | A/G | |||
| rs49689531 MPD | dbSNP | MGI SNP Detail | Chr12:88585661 | f | Vipas39 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | A | G | A/G | |||
| rs45853114 MPD | dbSNP | MGI SNP Detail | Chr12:88586843 | f | Vipas39 : Intron | 1 | SNP | G | G | G | G | G | G | G | T | G | G | G | T | G | G/T | ||||
| rs47033747 MPD | dbSNP | MGI SNP Detail | Chr12:88587692 | f | Vipas39 : Intron | 1 | SNP | G | G | G | G | G | G | G | C | G | G | G | C | G | C/G | ||||
| rs48347187 MPD | dbSNP | MGI SNP Detail | Chr12:88587724 | f | Vipas39 : Intron | 1 | SNP | C | C | C | C | C | C | C | T | C | C | C | T | C | C/T | ||||
| rs46985740 MPD | dbSNP | MGI SNP Detail | Chr12:88587925 | f | Vipas39 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | T | C | C/T | |||
| rs48507128 MPD | dbSNP | MGI SNP Detail | Chr12:88589666 | f | Vipas39 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | C/T | ||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs50925379 MPD | dbSNP | MGI SNP Detail | Chr12:88591547 | f | Vipas39 : Intron | 1 | SNP | C | C | C | C | C | C | C | A | C | C | C | C | C | C | A | A/C | ||
| rs46249517 MPD | dbSNP | MGI SNP Detail | Chr12:88591619 | f | Vipas39 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | A | G | A/G | ||
| rs51067635 MPD | dbSNP | MGI SNP Detail | Chr12:88591803 | f | Vipas39 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | A | T | T | T | T | T | A/T | ||
| rs47656095 MPD | dbSNP | MGI SNP Detail | Chr12:88591918 | f | Vipas39 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | C | T | T | T | T | T | C/T | ||
| rs49967864 MPD | dbSNP | MGI SNP Detail | Chr12:88592294 | f | Vipas39 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A/G | ||
| rs46382595 MPD | dbSNP | MGI SNP Detail | Chr12:88592312 | f | Vipas39 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | C | T | C/T | ||
| rs51398109 MPD | dbSNP | MGI SNP Detail | Chr12:88593535 | f | Vipas39 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | C | A | A | A | A | C | A | A/C | ||
| rs51594224 MPD | dbSNP | MGI SNP Detail | Chr12:88593772 | f | Vipas39 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | C | G | G | G | G | G | C/G | ||
| rs46492261 MPD | dbSNP | MGI SNP Detail | Chr12:88593803 | f | Vipas39 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | T | A | A | A | A | T | A | A/T | ||
| rs49946522 MPD | dbSNP | MGI SNP Detail | Chr12:88594047 | f | Vipas39 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | ||
| rs46230061 MPD | dbSNP | MGI SNP Detail | Chr12:88594048 | f | Vipas39 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | T | G | G | G | G | G | G/T | ||
| rs51304905 MPD | dbSNP | MGI SNP Detail | Chr12:88594392 | f | Vipas39 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | G | A | A | A | G | A | A/G | ||
| rs51515484 MPD | dbSNP | MGI SNP Detail | Chr12:88595239 | f | Vipas39 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | A | G | A/G | ||
| rs51631185 MPD | dbSNP | MGI SNP Detail | Chr12:88596465 | f | Vipas39 : Intron | 1 | SNP | G | G | G | G | G | G | G | A | G | G | G | G | A | G | A/G | |||
| rs47043246 MPD | dbSNP | MGI SNP Detail | Chr12:88596846 | f | Vipas39 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | A/G | ||
| rs52377060 MPD | dbSNP | MGI SNP Detail | Chr12:88597556 | f | Vipas39 : Intron | 1 | SNP | G | G | G | G | G | T | G | G | T | G | G | G | G | T | G | G/T | ||
| rs52387937 MPD | dbSNP | MGI SNP Detail | Chr12:88597586 | f | Vipas39 : Intron | 1 | SNP | A | A | A | A | A | C | A | A | C | C | A | A | A | C | A | A/C | ||
| rs49126097 MPD | dbSNP | MGI SNP Detail | Chr12:88598356 | f | Vipas39 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | A | G | A/G | ||
| rs50489714 MPD | dbSNP | MGI SNP Detail | Chr12:88598480 | f | Vipas39 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C/T | ||
| rs51286061 MPD | dbSNP | MGI SNP Detail | Chr12:88599628 | f | Vipas39 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C/T | ||
| rs47838544 MPD | dbSNP | MGI SNP Detail | Chr12:88600127 | f | Vipas39 : Coding-NonSynonymous | 1 | SNP | T | T | T | T | T | T | T | T | T | C | T | T | T | T | T | C/T | ||
| rs48956969 MPD | dbSNP | MGI SNP Detail | Chr12:88600209 | f | Vipas39 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | C/T | ||
| rs49676246 MPD | dbSNP | MGI SNP Detail | Chr12:88600276 | f | Vipas39 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | G | A | A | A | A | G | A | A/G | ||
| rs48828272 MPD | dbSNP | MGI SNP Detail | Chr12:88600660 | f | Vipas39 : Intron | 1 | SNP | T | T | T | T | T | T | T | G | T | T | T | G | T | G/T | ||||
| rs50209216 MPD | dbSNP | MGI SNP Detail | Chr12:88601446 | f | Vipas39 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | C | T | T | T | C | T | C/T | ||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs51728105 MPD | dbSNP | MGI SNP Detail | Chr12:88601691 | f | Vipas39 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | A/G | ||
| rs47768541 MPD | dbSNP | MGI SNP Detail | Chr12:88601766 | f | Vipas39 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | C | G | G | G | G | C | G | C/G | ||
| rs47605152 MPD | dbSNP | MGI SNP Detail | Chr12:88601941 | f | Vipas39 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | T | C | C | C | C | C | C/T | ||
| rs46357252 MPD | dbSNP | MGI SNP Detail | Chr12:88601988 | f | Vipas39 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | G | A | A | A | G | A | A/G | ||
| rs49576493 MPD | dbSNP | MGI SNP Detail | Chr12:88603591 | f | Vipas39 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | A | G | A/G | ||
| rs46447739 MPD | dbSNP | MGI SNP Detail | Chr12:88603601 | f | Vipas39 : Intron | 1 | SNP | C | C | C | C | C | A | C | C | C | C | C | C | C | C | C | A/C | ||
| rs47146308 MPD | dbSNP | MGI SNP Detail | Chr12:88604215 | f | Vipas39 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | G | A | A | A | G | A | A/G | ||
| rs46128452 MPD | dbSNP | MGI SNP Detail | Chr12:88604278 | f | Vipas39 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | A/G | |||
| rs45791880 MPD | dbSNP | MGI SNP Detail | Chr12:88604288 | f | Vipas39 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | A | G | A | A | A | A | A | A/G | ||
| rs48961608 MPD | dbSNP | MGI SNP Detail | Chr12:88604745 | f | Vipas39 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | T | C | C | C | C | C | C/T | ||
| rs48273091 MPD | dbSNP | MGI SNP Detail | Chr12:88604837 | f | Vipas39 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | A | G | A | A | A | A | A | A/G | ||
| rs46389517 MPD | dbSNP | MGI SNP Detail | Chr12:88604870 | f | Vipas39 : Coding-Synonymous | 1 | SNP | A | A | A | A | A | G | A | A | A | G | A | A | A | A | A | A/G | ||
| rs50494828 MPD | dbSNP | MGI SNP Detail | Chr12:88605005 | f | Vipas39 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | C | T | T | T | T | T | C/T | ||
| rs46687164 MPD | dbSNP | MGI SNP Detail | Chr12:88605081 | f | Vipas39 : mRNA-UTR | 1 | SNP | T | T | T | T | T | C | T | T | T | C | T | T | T | T | T | C/T | ||
| rs45900071 MPD | dbSNP | MGI SNP Detail | Chr12:88605469 | f | Vipas39 : Locus-Region | 1 | SNP | G | G | G | G | G | C | G | G | G | G | C/G | |||||||
| rs46184940 MPD | dbSNP | MGI SNP Detail | Chr12:88605663 | f | Vipas39 : Locus-Region | 1 | SNP | T | T | T | T | T | C | T | T | C | C | T | T | T | C | T | C/T |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 06/05/2013 MGI 5.13 |
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