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Mouse SNPs
Query Results -- Summary
 Symbol
Name
ID
Arhgap9
Rho GTPase activating protein 9
MGI:2143764

35 matching SNPs displayed
Full result set is also available in a tab-delimited format.


Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs49990401
MPD | dbSNP | MGI SNP Detail
Chr10:127321783fArhgap9 : Locus-Region1SNPT TTTT CTTCT   TT TCTC/T
rs48026465
MPD | dbSNP | MGI SNP Detail
Chr10:127321853fArhgap9 : Locus-Region1SNPC CCCC ACCCC   CC CCCA/C
rs52440247
MPD | dbSNP | MGI SNP Detail
Chr10:127322054fArhgap9 : Locus-Region1SNPG GG G AGGGG   GG G GA/G
rs49684722
MPD | dbSNP | MGI SNP Detail
Chr10:127322487fArhgap9 : Locus-Region1SNPC CCCC GCC C   CC C CC/G
rs47059670
MPD | dbSNP | MGI SNP Detail
Chr10:127322496fArhgap9 : Locus-Region1SNPG GGAG GGG G   G  G GA/G
rs47029977
MPD | dbSNP | MGI SNP Detail
Chr10:127322920fArhgap9 : Locus-Region1SNPT TTAT TTT T    T   TA/T
rs50164990
MPD | dbSNP | MGI SNP Detail
Chr10:127323239fArhgap9 : Locus-Region1SNP  AA A GAA A    A A AA/G
rs29322887
MPD | dbSNP | MGI SNP Detail
Chr10:127323412fArhgap9 : Locus-Region3SNP  G     A   A    G   A/G
rs29322639
MPD | dbSNP | MGI SNP Detail
Chr10:127323470fArhgap9 : Locus-Region3SNP  T     C   C    T   C/T
rs29354020
MPD | dbSNP | MGI SNP Detail
Chr10:127323807fArhgap9 : mRNA-UTR3SNP GG   C G   C    G   C/G
rs29342421
MPD | dbSNP | MGI SNP Detail
Chr10:127324029fArhgap9 : Intron4SNPCAG A A A  AA   AGAAAA/C/G
rs29331715
MPD | dbSNP | MGI SNP Detail
Chr10:127324213fArhgap9 : Intron4SNP CTCTTCCCT TC   CTC  C/T
rs226156599
MPD | dbSNP | MGI SNP Detail
Chr10:127324604fArhgap9 : Intron1SNP            G    A   A/G
rs29361993
MPD | dbSNP | MGI SNP Detail
Chr10:127325591fArhgap9 : Coding-Synonymous4SNP CTC TCCCT TC   CTC CC/T
rs29310617
MPD | dbSNP | MGI SNP Detail
Chr10:127325630fArhgap9 : Coding-Synonymous3SNP GT   G G   G    T   G/T
rs29320913
MPD | dbSNP | MGI SNP Detail
Chr10:127325637fArhgap9 : Intron3SNP AC   A A   A    C   A/C
rs29361816
MPD | dbSNP | MGI SNP Detail
Chr10:127325721fArhgap9 : Intron3SNP CT   C     C    T   C/T
rs29365892
MPD | dbSNP | MGI SNP Detail
Chr10:127325823fArhgap9 : Intron3SNP GA   G A   G    A   A/G
rs29359404
MPD | dbSNP | MGI SNP Detail
Chr10:127326260fArhgap9 : Intron1SNP AA     T            A/T
rs29381932
MPD | dbSNP | MGI SNP Detail
Chr10:127326395fArhgap9 : Coding-NonSynonymous3SNP CT     C   C    T   C/T
rs46507512
MPD | dbSNP | MGI SNP Detail
Chr10:127327496fArhgap9 : Intron1SNPA AAAA CAAAA    A A AA/C
rs49063297
MPD | dbSNP | MGI SNP Detail
Chr10:127328763fArhgap9 : Intron1SNPC CCCC TCC C    C C CC/T
rs49771368
MPD | dbSNP | MGI SNP Detail
Chr10:127328963fArhgap9 : Coding-Synonymous1SNPC CCCC TCC C    C C CC/T
rs29348506
MPD | dbSNP | MGI SNP Detail
Chr10:127329013fArhgap9 : Intron2SNP CC   C T            C/T
rs29326217
MPD | dbSNP | MGI SNP Detail
Chr10:127329028fArhgap9 : Intron3SNP TC   T C   T    C   C/T
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs51123143
MPD | dbSNP | MGI SNP Detail
Chr10:127329107fArhgap9 : Intron1SNPA AA A GAA A    A A AA/G
rs29365940
MPD | dbSNP | MGI SNP Detail
Chr10:127329138fArhgap9 : Intron2SNP AA   A G            A/G
rs29331435
MPD | dbSNP | MGI SNP Detail
Chr10:127329178fArhgap9 : Intron1SNP TT     A            A/T
rs4228518
MPD | dbSNP | MGI SNP Detail
Chr10:127330827fArhgap9 : 884 bp downstream of
Gli1 : Coding-Synonymous
Gli1 : Coding-NonSynonymous
1SNP  A A AG     GA      A/G
rs4228519
MPD | dbSNP | MGI SNP Detail
Chr10:127330845fArhgap9 : 902 bp downstream of
Gli1 : Coding-Synonymous
1SNP  C C CC     TC      C/T
rs4228520
MPD | dbSNP | MGI SNP Detail
Chr10:127330848fArhgap9 : 905 bp downstream of
Gli1 : Coding-Synonymous
1SNP  C C CT     TC      C/T
rs4228521
MPD | dbSNP | MGI SNP Detail
Chr10:127331166fArhgap9 : 1223 bp downstream of
Gli1 : Coding-Synonymous
1SNP  C CCCC     TC      C/T
rs4228522
MPD | dbSNP | MGI SNP Detail
Chr10:127331178fArhgap9 : 1235 bp downstream of
Gli1 : Coding-Synonymous
1SNP  T TTTT     CT      C/T
rs4228523
MPD | dbSNP | MGI SNP Detail
Chr10:127331244fArhgap9 : 1301 bp downstream of
Gli1 : Coding-Synonymous
2SNPA AAAAAGGG G  A G A GA/G
rs29351980
MPD | dbSNP | MGI SNP Detail
Chr10:127331364fArhgap9 : 1421 bp downstream of
Gli1 : Coding-Synonymous
1SNP CC   C T            C/T

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory