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Mouse SNPs
Query Results -- Summary
 Symbol
Name
ID
Mmp1a
matrix metallopeptidase 1a (interstitial collagenase)
MGI:1933846

91 matching SNPs displayed
Full result set is also available in a tab-delimited format.
Exclude SNPs that map to multiple locations

Legend
*The reference flanking sequence for this SNP maps to multiple locations in the mouse genome.
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs49484219 *
MPD | dbSNP | MGI SNP Detail
Chr9:7370937f 1SNPGG GGGGGGAGGGGGG   A/G
rs38797585 *
MPD | dbSNP | MGI SNP Detail
Chr9:7375673r 1SNP   TTTTTC C TT     C/T
rs37747672 *
MPD | dbSNP | MGI SNP Detail
Chr9:7375706r 1SNP   CCCCCT C CC C   C/T
rs36239705 *
MPD | dbSNP | MGI SNP Detail
Chr9:7386540r 2SNPAG AAAAAGGAAAAAA   A/G
rs36239669 *
MPD | dbSNP | MGI SNP Detail
Chr9:7386548r 2SNPGT GGGGGGGGGGGGG   G/T
rs36365089 *
MPD | dbSNP | MGI SNP Detail
Chr9:7386600r 1SNPCT CCCCCCCCCCCCC   C/T
rs36239512 *
MPD | dbSNP | MGI SNP Detail
Chr9:7386613r 2SNPTC TTTTT  TTTTTT   C/T
rs36238329 *
MPD | dbSNP | MGI SNP Detail
Chr9:7386910r 1SNPCT CCCCCCCCCCCCC   C/T
rs36239108 *
MPD | dbSNP | MGI SNP Detail
Chr9:7386995r 2SNPGA GGGGGAAGGGGGG   A/G
rs36239575 *
MPD | dbSNP | MGI SNP Detail
Chr9:7388742r 2SNPAG AAAAAA AAAA A   A/G
rs36239604 *
MPD | dbSNP | MGI SNP Detail
Chr9:7388760r 2SNPCA CCCCCC CCCCCC   A/C
rs52566355
MPD | dbSNP | MGI SNP Detail
Chr9:7462158f 1SNP      T         T CC/T
rs52426066
MPD | dbSNP | MGI SNP Detail
Chr9:7462168f 1SNP      T         T CC/T
rs52447519
MPD | dbSNP | MGI SNP Detail
Chr9:7462177f 1SNP      G           AA/G
rs52101028
MPD | dbSNP | MGI SNP Detail
Chr9:7462228f 1SNPC     C         C TC/T
rs51923896
MPD | dbSNP | MGI SNP Detail
Chr9:7462257f 1SNP      C         C AA/C
rs47454978
MPD | dbSNP | MGI SNP Detail
Chr9:7462278f 1SNPG     G         G CC/G
rs47153721
MPD | dbSNP | MGI SNP Detail
Chr9:7462310f 1SNPA     A         A GA/G
rs30613449
MPD | dbSNP | MGI SNP Detail
Chr9:7462313r 3SNPAG AGAAGG GAAAGGG GA/G
rs36949123
MPD | dbSNP | MGI SNP Detail
Chr9:7462325f 1SNPCG CCCCCC CCCCCC   C/G
rs50128776
MPD | dbSNP | MGI SNP Detail
Chr9:7462348f 1SNP      G           AA/G
rs46396257
MPD | dbSNP | MGI SNP Detail
Chr9:7462352f 1SNP      G         G TG/T
rs36821951
MPD | dbSNP | MGI SNP Detail
Chr9:7462413f 2SNPTT TTTTTG TTTTTTT GG/T
rs48574575
MPD | dbSNP | MGI SNP Detail
Chr9:7462428f 1SNP      G         G CC/G
rs36796903
MPD | dbSNP | MGI SNP Detail
Chr9:7462461f 1SNPAG AAAAAG AAAAAA   A/G
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs47478288
MPD | dbSNP | MGI SNP Detail
Chr9:7462497f 1SNPT     T         T CC/T
rs45911653
MPD | dbSNP | MGI SNP Detail
Chr9:7462513f 1SNP      G         G AA/G
rs36282195
MPD | dbSNP | MGI SNP Detail
Chr9:7462565f 1SNPCG CCCCC  CCCCCC   C/G
rs48249052
MPD | dbSNP | MGI SNP Detail
Chr9:7462586f 1SNP      A           GA/G
rs51702894
MPD | dbSNP | MGI SNP Detail
Chr9:7462596f 1SNPA     A         A GA/G
rs37754456
MPD | dbSNP | MGI SNP Detail
Chr9:7463256f 1SNPC  CCCCCT CCCCCC   C/T
rs36312511
MPD | dbSNP | MGI SNP Detail
Chr9:7463338f 1SNPAT AAAAAA AAAAAA   A/T
rs36239604 *
MPD | dbSNP | MGI SNP Detail
Chr9:7463383f 2SNPCA CCCCCC CCCCCC   A/C
rs36239575 *
MPD | dbSNP | MGI SNP Detail
Chr9:7463401f 2SNPAG AAAAAA AAAA A   A/G
rs36239457
MPD | dbSNP | MGI SNP Detail
Chr9:7463431f 1SNPGC GGGGGC GGGGGG   C/G
rs37895568
MPD | dbSNP | MGI SNP Detail
Chr9:7463921f 1SNPGA GGGGGA GGGGGG   A/G
rs36262401
MPD | dbSNP | MGI SNP Detail
Chr9:7464010f 1SNPCC CCCCTC CCCCTC   C/T
rs37945421
MPD | dbSNP | MGI SNP Detail
Chr9:7464202f 1SNPTT TTTTTT ATTTTT   A/T
rs38084772
MPD | dbSNP | MGI SNP Detail
Chr9:7464309f 1SNPGA GGGGGA GGGGGG   A/G
rs38028208
MPD | dbSNP | MGI SNP Detail
Chr9:7464585f 1SNPTC TTTTTC TTTTTT   C/T
rs38828205
MPD | dbSNP | MGI SNP Detail
Chr9:7464614f 1SNPGG GGGGGT GGGGGG   G/T
rs36239696
MPD | dbSNP | MGI SNP Detail
Chr9:7464896f 1SNPCC CCCCCAACCCCCC   A/C
rs36239108 *
MPD | dbSNP | MGI SNP Detail
Chr9:7464983f 2SNPGA GGGGGAAGGGGGG   A/G
rs36238329 *
MPD | dbSNP | MGI SNP Detail
Chr9:7465068f 1SNPCT CCCCCCCCCCCCC   C/T
rs36239046
MPD | dbSNP | MGI SNP Detail
Chr9:7465102f 2SNPAA AAAAAT AAAAAA   A/T
rs36806064
MPD | dbSNP | MGI SNP Detail
Chr9:7465144f 1SNPTC TTTTTC T TTTT   C/T
rs36239410
MPD | dbSNP | MGI SNP Detail
Chr9:7465161f 1SNPGA GGGGGA GGGGGG   A/G
rs36239512 *
MPD | dbSNP | MGI SNP Detail
Chr9:7465367f 2SNPTC TTTTT  TTTTTT   C/T
rs36365089 *
MPD | dbSNP | MGI SNP Detail
Chr9:7465380f 1SNPCT CCCCCCCCCCCCC   C/T
rs36239669 *
MPD | dbSNP | MGI SNP Detail
Chr9:7465432f 2SNPGT GGGGGGGGGGGGG   G/T
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs36239705 *
MPD | dbSNP | MGI SNP Detail
Chr9:7465440f 2SNPAG AAAAAGGAAAAAA   A/G
rs36449133
MPD | dbSNP | MGI SNP Detail
Chr9:7465843f 1SNPCG CCCCCG CCCCCC   C/G
rs37712467
MPD | dbSNP | MGI SNP Detail
Chr9:7465855f 1SNPTC TTTTT  TTTTTT   C/T
rs36572861
MPD | dbSNP | MGI SNP Detail
Chr9:7466733f 1SNP C   TT C T T T    C/T
rs39172001
MPD | dbSNP | MGI SNP Detail
Chr9:7466856f 1SNPAG AAAAAGGAAAAAA   A/G
rs36259681
MPD | dbSNP | MGI SNP Detail
Chr9:7467390f 1SNPAG AAAAAG AAAAAA   A/G
rs38167523
MPD | dbSNP | MGI SNP Detail
Chr9:7467574f 1SNPCT CCCCCT CCCCCC   C/T
rs38048049
MPD | dbSNP | MGI SNP Detail
Chr9:7467919f 1SNPAG  AAAAG A AAAA   A/G
rs37312789
MPD | dbSNP | MGI SNP Detail
Chr9:7467980f 1SNPCT CC CCT CCCCCC   C/T
rs37582294
MPD | dbSNP | MGI SNP Detail
Chr9:7468213f 1SNPCT CCCCCT CCCCCC   C/T
rs30585272
MPD | dbSNP | MGI SNP Detail
Chr9:7468935r 1SNPC C   A         C  A/C
rs49840989
MPD | dbSNP | MGI SNP Detail
Chr9:7470120f 1SNPT     T           CC/T
rs49924485
MPD | dbSNP | MGI SNP Detail
Chr9:7470182f 1SNPT                 GG/T
rs47846177
MPD | dbSNP | MGI SNP Detail
Chr9:7470187f 1SNPG     G           CC/G
rs47544555
MPD | dbSNP | MGI SNP Detail
Chr9:7470201f 1SNPC     C         C GC/G
rs51860196
MPD | dbSNP | MGI SNP Detail
Chr9:7470238f 1SNPG     G         G AA/G
rs49113399
MPD | dbSNP | MGI SNP Detail
Chr9:7470290f 1SNPC     C         C TC/T
rs46279951
MPD | dbSNP | MGI SNP Detail
Chr9:7470332f 1SNPG     G         G AA/G
rs51951680
MPD | dbSNP | MGI SNP Detail
Chr9:7470344f 1SNPG     G         G TG/T
rs47114351
MPD | dbSNP | MGI SNP Detail
Chr9:7470632f 1SNPG     G         G TG/T
rs36663028
MPD | dbSNP | MGI SNP Detail
Chr9:7473290f 1SNPC  CCCCCT CCCC C   C/T
rs37747672 *
MPD | dbSNP | MGI SNP Detail
Chr9:7473641f 1SNP   CCCCCT C CC C   C/T
rs38797585 *
MPD | dbSNP | MGI SNP Detail
Chr9:7473674f 1SNP   TTTTTC C TT     C/T
rs6164555
MPD | dbSNP | MGI SNP Detail
Chr9:7473679f 1SNP  C              T C/T
rs6164565
MPD | dbSNP | MGI SNP Detail
Chr9:7473680f 1SNP  C              G C/G
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs6164568
MPD | dbSNP | MGI SNP Detail
Chr9:7473687f 1SNP  A              G A/G
rs37726939
MPD | dbSNP | MGI SNP Detail
Chr9:7473827f 1SNPTT TTTTTC TTTT T   C/T
rs6165555
MPD | dbSNP | MGI SNP Detail
Chr9:7473840f 1SNP  C              G C/G
rs6166078
MPD | dbSNP | MGI SNP Detail
Chr9:7473922f 2SNPAAAAAAAACCAAAAAA C A/C
rs6166175
MPD | dbSNP | MGI SNP Detail
Chr9:7473985f 1SNP  A              G A/G
rs6166176
MPD | dbSNP | MGI SNP Detail
Chr9:7473987f 1SNP  T              G G/T
rs49484219 *
MPD | dbSNP | MGI SNP Detail
Chr9:7474015r 1SNPGG GGGGGGAGGGGGG   A/G
rs6180425
MPD | dbSNP | MGI SNP Detail
Chr9:7474280f 1SNP  T              A A/T
rs36750978
MPD | dbSNP | MGI SNP Detail
Chr9:7474463f 1SNPC  CCCCCA C CC C   A/C
rs36420600
MPD | dbSNP | MGI SNP Detail
Chr9:7474541f 1SNPAA AAAAAG AAAA A   A/G
rs37071155
MPD | dbSNP | MGI SNP Detail
Chr9:7475209f 1SNPCC CCCCCG CCCC C   C/G
rs37069428
MPD | dbSNP | MGI SNP Detail
Chr9:7475243f 1SNP   AAAAAGGAAAA A   A/G
rs36394604
MPD | dbSNP | MGI SNP Detail
Chr9:7475320f 1SNPTT TTTTTC TTTTTT   C/T
rs38514675
MPD | dbSNP | MGI SNP Detail
Chr9:7475560f 1SNPA  AAAAAG A AA A   A/G
rs37536060
MPD | dbSNP | MGI SNP Detail
Chr9:7475784f 1SNPTT TTTTTCCTTTTTT   C/T
rs36881717
MPD | dbSNP | MGI SNP Detail
Chr9:7475860f 1SNPG  GGGGGA GGGGGG   A/G
rs37086224
MPD | dbSNP | MGI SNP Detail
Chr9:7476266f 1SNPC  CCCCCT CCCCCC   C/T
rs37303166
MPD | dbSNP | MGI SNP Detail
Chr9:7476673f 1SNPT  TCTTCC  TTT C   C/T
rs36703190
MPD | dbSNP | MGI SNP Detail
Chr9:7476818f 1SNPG  GGGGGA G GGGG   A/G
rs38474970
MPD | dbSNP | MGI SNP Detail
Chr9:7476905f 1SNPG  GGGGGT GGGGGG   G/T
rs36797746
MPD | dbSNP | MGI SNP Detail
Chr9:7477281f 1SNP   CCCCCG C CC C   C/G
rs36273224
MPD | dbSNP | MGI SNP Detail
Chr9:7477349f 1SNPCC CCCCCT CCCCCC   C/T
rs37839020
MPD | dbSNP | MGI SNP Detail
Chr9:7477360f 1SNPAA AAAAAC AAAA A   A/C
rs37595465
MPD | dbSNP | MGI SNP Detail
Chr9:7477414f 1SNPT  TTTTTC TTTT T   C/T
rs36345534
MPD | dbSNP | MGI SNP Detail
Chr9:7477449f 1SNP    TTTTC   TT T   C/T
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs37276462
MPD | dbSNP | MGI SNP Detail
Chr9:7477595f 1SNPA  AAAAAG AAAA A   A/G
rs36468233
MPD | dbSNP | MGI SNP Detail
Chr9:7477610f 1SNP   AAAAAT A AA A   A/T

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last database update
05/24/2016
MGI 6.04
The Jackson Laboratory