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Mouse SNPs
Query Results -- Summary
 Symbol
Name
ID
Nfatc4
nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 4
MGI:1920431

99 matching SNPs displayed
Full result set is also available in a tab-delimited format.


Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs31043601
MPD | dbSNP | MGI SNP Detail
Chr14:55822800fNfatc4 : Locus-Region4SNP AA AA   G GG      G              A     A A      A/G
rs30604178
MPD | dbSNP | MGI SNP Detail
Chr14:55823295fNfatc4 : Locus-Region4SNPA AAAA   G GG      G              A     A A      A/G
rs50740643
MPD | dbSNP | MGI SNP Detail
Chr14:55823359fNfatc4 : Locus-Region1SNP  C        A                                     A/C
rs31457289
MPD | dbSNP | MGI SNP Detail
Chr14:55823872fNfatc4 : Locus-Region3SNP CC   C    A       A              C              A/C
rs30717211
MPD | dbSNP | MGI SNP Detail
Chr14:55823916fNfatc4 : Locus-Region4SNPCCCCCCC  C TTC     T              C     C C      C/T
rs50701743
MPD | dbSNP | MGI SNP Detail
Chr14:55824106fNfatc4 : Locus-Region1SNP  CCCC   T CC         C                 C C      C/T
rs50015138
MPD | dbSNP | MGI SNP Detail
Chr14:55824216fNfatc4 : Locus-Region1SNPC CCCC   T CC         C                 C C      C/T
rs259468175
MPD | dbSNP | MGI SNP Detail
Chr14:55825461fNfatc4 : Intron1SNP                   C              G              C/G
rs49797628
MPD | dbSNP | MGI SNP Detail
Chr14:55826459fNfatc4 : Coding-Synonymous2SNP AA        T       T              A              A/T
rs50342063
MPD | dbSNP | MGI SNP Detail
Chr14:55826460fNfatc4 : Coding-NonSynonymous2SNP TT        C       C              T              C/T
rs31385047
MPD | dbSNP | MGI SNP Detail
Chr14:55826552fNfatc4 : Coding-Synonymous2SNP TT        C       C              T              C/T
rs30575461
MPD | dbSNP | MGI SNP Detail
Chr14:55826591fNfatc4 : Coding-Synonymous4SNPGGGGGG   T TTGT    T  T          GG     G G    T G/T
rs48023245
MPD | dbSNP | MGI SNP Detail
Chr14:55826648fNfatc4 : Coding-Synonymous1SNPG GGGG   A GGGG       G          G      G G    G A/G
rs30344938
MPD | dbSNP | MGI SNP Detail
Chr14:55826930fNfatc4 : Coding-Synonymous3SNP GG   G    A       A              G              A/G
rs13482194
MPD | dbSNP | MGI SNP Detail
Chr14:55827119fNfatc4 : Coding-Synonymous5SNPAAAAAAAAAACCCACCAACCACCCACAAAACCAAAACAAAAAACAAACCA/C
rs30402028
MPD | dbSNP | MGI SNP Detail
Chr14:55827274fNfatc4 : Intron4SNPGGGGGG   T TTTT    T  T          GG     G G    T G/T
rs30732526
MPD | dbSNP | MGI SNP Detail
Chr14:55827421fNfatc4 : Intron2SNPAAA   A    T                                     A/T
rs47741943
MPD | dbSNP | MGI SNP Detail
Chr14:55827719fNfatc4 : Intron1SNPA AAAA   A AAGA       A          A      A A    A A/G
rs45647684
MPD | dbSNP | MGI SNP Detail
Chr14:55827786fNfatc4 : Intron1SNPT TTTT   T TTTT       T          T      T T    C C/T
rs31236327
MPD | dbSNP | MGI SNP Detail
Chr14:55827859fNfatc4 : Intron4SNPTTTTTTT    GG G    G             TT     T T    G G/T
rs47640942
MPD | dbSNP | MGI SNP Detail
Chr14:55828265fNfatc4 : Intron1SNPC CCCC   C CCCC       C          C      C C    T C/T
rs52047944
MPD | dbSNP | MGI SNP Detail
Chr14:55828306fNfatc4 : Intron2SNPC CCCC     TTCT    T             CC     C C    T C/T
rs50459451
MPD | dbSNP | MGI SNP Detail
Chr14:55828943fNfatc4 : Intron1SNPC CCCC   C CCCC       C          C      C C    G C/G
rs49044754
MPD | dbSNP | MGI SNP Detail
Chr14:55829538fNfatc4 : Coding-Synonymous2SNPA AAAA   G GGGG    G  G          AA     A A    G A/G
rs108462575
MPD | dbSNP | MGI SNP Detail
Chr14:55829578fNfatc4 : Intron2SNP GG        C       C              G              C/G
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs30484932
MPD | dbSNP | MGI SNP Detail
Chr14:55829590fNfatc4 : Intron3SNP CC   C    T       T              C              C/T
rs47531393
MPD | dbSNP | MGI SNP Detail
Chr14:55829693fNfatc4 : Intron1SNPG GGGG   C GGCG       G          G      G G    G C/G
rs31141153
MPD | dbSNP | MGI SNP Detail
Chr14:55829800fNfatc4 : Intron4SNPCCCCCCC    TT T    T  T          CC     C C    T C/T
rs30563939
MPD | dbSNP | MGI SNP Detail
Chr14:55829875fNfatc4 : Intron4SNPG GGGGG  G AA A    A  A          GG     G G    G A/G
rs31144482
MPD | dbSNP | MGI SNP Detail
Chr14:55830018fNfatc4 : Coding-NonSynonymous4SNPG GGGGG  G AA A    A  A          GG     G G    G A/G
rs50625414
MPD | dbSNP | MGI SNP Detail
Chr14:55830466fNfatc4 : Coding-Synonymous2SNP GG        T       T              G              G/T
rs46698290
MPD | dbSNP | MGI SNP Detail
Chr14:55830652fNfatc4 : Intron1SNPG GGGG   A GGGG       G          G      G G    G A/G
rs49897626
MPD | dbSNP | MGI SNP Detail
Chr14:55830705fNfatc4 : Intron1SNPA   A       G G                  A      A A      A/G
rs51744146
MPD | dbSNP | MGI SNP Detail
Chr14:55830732fNfatc4 : Intron3SNPAAAAAA   G GGAG    G  G          AA     A A    G A/G
rs51034858
MPD | dbSNP | MGI SNP Detail
Chr14:55830813fNfatc4 : Intron1SNP GG        A                                     A/G
rs46873469
MPD | dbSNP | MGI SNP Detail
Chr14:55830822fNfatc4 : Intron1SNP TT        C                                     C/T
rs49382162
MPD | dbSNP | MGI SNP Detail
Chr14:55830826fNfatc4 : Intron1SNP GG        T                                     G/T
rs47128145
MPD | dbSNP | MGI SNP Detail
Chr14:55830839fNfatc4 : Intron1SNP TT        A                                     A/T
rs49239461
MPD | dbSNP | MGI SNP Detail
Chr14:55830852fNfatc4 : Intron1SNP           A                                     A
rs46020047
MPD | dbSNP | MGI SNP Detail
Chr14:55830908fNfatc4 : Intron1SNP AA        G                                     A/G
rs48590709
MPD | dbSNP | MGI SNP Detail
Chr14:55831025fNfatc4 : Intron3SNPGGGGGG   G AAAA    A             GG     G G    A A/G
rs50956479
MPD | dbSNP | MGI SNP Detail
Chr14:55831064fNfatc4 : Intron3SNPCCCCCC   C GG G    G             CC     C C      C/G
rs50095715
MPD | dbSNP | MGI SNP Detail
Chr14:55831074fNfatc4 : Intron3SNPAAAAAA   A C       C  C          AA     A A    C A/C
rs46810180
MPD | dbSNP | MGI SNP Detail
Chr14:55831139fNfatc4 : Intron3SNPTTTTTT   T CCCC    C             TT     T T    C C/T
rs46532861
MPD | dbSNP | MGI SNP Detail
Chr14:55831178fNfatc4 : Intron3SNPA AAAA   G GGGG    G  G          AA     A A    G A/G
rs52030762
MPD | dbSNP | MGI SNP Detail
Chr14:55831226fNfatc4 : Intron2SNP GG        A       A              G              A/G
rs46337425
MPD | dbSNP | MGI SNP Detail
Chr14:55831261fNfatc4 : Intron3SNPT TTTT   T CCCC    C  C          TT     T T    C C/T
rs49625668
MPD | dbSNP | MGI SNP Detail
Chr14:55831388fNfatc4 : Intron2SNP G         A       A              G              A/G
rs49875707
MPD | dbSNP | MGI SNP Detail
Chr14:55831553fNfatc4 : Intron2SNPGGGGGG   G AGGG       A          G      G G    G A/G
rs212705466
MPD | dbSNP | MGI SNP Detail
Chr14:55831579fNfatc4 : Intron1SNP                   T              G              G/T
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs229872489
MPD | dbSNP | MGI SNP Detail
Chr14:55831580fNfatc4 : Intron1SNP                   A              T              A/T
rs45690304
MPD | dbSNP | MGI SNP Detail
Chr14:55831624fNfatc4 : Intron2SNP GG        A       A              G              A/G
rs50452531
MPD | dbSNP | MGI SNP Detail
Chr14:55831681fNfatc4 : Coding-Synonymous2SNPA AAAA   A GG G    G             AA     A A    G A/G
rs47463539
MPD | dbSNP | MGI SNP Detail
Chr14:55831693fNfatc4 : Coding-Synonymous2SNPA AAAA   A GGGG    G  G          AA     A A    G A/G
rs46517042
MPD | dbSNP | MGI SNP Detail
Chr14:55831723fNfatc4 : Intron1SNP                   C              T              C/T
rs6373484
MPD | dbSNP | MGI SNP Detail
Chr14:55831839fNfatc4 : Intron3SNPC CCCCC  CTTTTT    T  T          CC     C C    T C/T
rs6373537
MPD | dbSNP | MGI SNP Detail
Chr14:55831870fNfatc4 : Intron2SNP      G   A        A              G              A/G
rs6386620
MPD | dbSNP | MGI SNP Detail
Chr14:55831934fNfatc4 : Intron2SNP      T   C        C              T              C/T
rs6387186
MPD | dbSNP | MGI SNP Detail
Chr14:55832084fNfatc4 : Intron3SNPA AAAAA  AGGGGG    G  G          AA     A A    G A/G
rs51603898
MPD | dbSNP | MGI SNP Detail
Chr14:55832524fNfatc4 : Coding-Synonymous2SNPC CCCC   C TTCT    T  T          CC     C C    T C/T
rs49983109
MPD | dbSNP | MGI SNP Detail
Chr14:55832894fNfatc4 : Intron
Nfatc4 : mRNA-UTR
3SNPCCCCCC   C TTCT    T  T          CC     C C    T C/T
rs230638593
MPD | dbSNP | MGI SNP Detail
Chr14:55832961fNfatc4 : Intron
Nfatc4 : mRNA-UTR
1SNP                   A              T              A/T
rs30921281
MPD | dbSNP | MGI SNP Detail
Chr14:55833121fNfatc4 : Intron
Nfatc4 : mRNA-UTR
4SNPAAAAAAA  A GG G    G  G          AA     A A    A A/G
rs50577610
MPD | dbSNP | MGI SNP Detail
Chr14:55833297fNfatc4 : Intron
Nfatc4 : mRNA-UTR
1SNPA A AA     AAGA       A          A      A A    A A/G
rs265408313
MPD | dbSNP | MGI SNP Detail
Chr14:55833495fNfatc4 : Intron
Nfatc4 : mRNA-UTR
1SNP                   A              C              A/C
rs46055583
MPD | dbSNP | MGI SNP Detail
Chr14:55833572fNfatc4 : Coding-NonSynonymous
Nfatc4 : mRNA-UTR
1SNPG GGGG   G GGCG       G          G      G G    G C/G
rs48935627
MPD | dbSNP | MGI SNP Detail
Chr14:55833766fNfatc4 : mRNA-UTR2SNPA AAAA   A GGAG    G             AA     A A    G A/G
rs47566236
MPD | dbSNP | MGI SNP Detail
Chr14:55833901fNfatc4 : mRNA-UTR2SNPG GGGG   G AAGA    A  A          GG     G G    G A/G
rs47127347
MPD | dbSNP | MGI SNP Detail
Chr14:55833948fNfatc4 : Intron2SNPA AAAA   A GGAG    G  G          AA     A A    G A/G
rs224129272
MPD | dbSNP | MGI SNP Detail
Chr14:55834022fNfatc4 : Intron1SNP                   G              A              A/G
rs51724142
MPD | dbSNP | MGI SNP Detail
Chr14:55834050fNfatc4 : Intron2SNPC CCCC   T TTTT    T  T          CC     C C    T C/T
rs47647145
MPD | dbSNP | MGI SNP Detail
Chr14:55834192fNfatc4 : Intron2SNP  GGGG   G TTTT    T  T          GG     G G    T G/T
rs240972752
MPD | dbSNP | MGI SNP Detail
Chr14:55834265fNfatc4 : Intron1SNP                   C              T              C/T
rs50681068
MPD | dbSNP | MGI SNP Detail
Chr14:55834271fNfatc4 : Intron2SNPA AAAA   A GGA     G             AA     A A    G A/G
rs216198229
MPD | dbSNP | MGI SNP Detail
Chr14:55834374fNfatc4 : Intron1SNP                   G              A              A/G
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs235259606
MPD | dbSNP | MGI SNP Detail
Chr14:55834421fNfatc4 : Intron1SNP                   C              T              C/T
rs46006860
MPD | dbSNP | MGI SNP Detail
Chr14:55834426fNfatc4 : Intron2SNPA AAAA   A G A     G             AA     A A    G A/G
rs47451817
MPD | dbSNP | MGI SNP Detail
Chr14:55834442fNfatc4 : Intron2SNPT TTTT   C CCCC    C  C          TT     T T    C C/T
rs230274663
MPD | dbSNP | MGI SNP Detail
Chr14:55834769fNfatc4 : 826 bp downstream of1SNP                   G              C              C/G
rs48485134
MPD | dbSNP | MGI SNP Detail
Chr14:55834809fNfatc4 : 866 bp downstream of3SNPG GGGG   A AAAA    A  A          GG     G G    A A/G
rs46471669
MPD | dbSNP | MGI SNP Detail
Chr14:55834834fNfatc4 : 891 bp downstream of2SNPA AAAA   G GGGG    G  G          AA     A A    G A/G
rs51313571
MPD | dbSNP | MGI SNP Detail
Chr14:55834881fNfatc4 : 938 bp downstream of3SNPA AAAA   G GGAG    G  G          AA     A A    G A/G
rs107604304
MPD | dbSNP | MGI SNP Detail
Chr14:55835138fNfatc4 : 1195 bp downstream of1SNP  G        T                                     G/T
rs108088592
MPD | dbSNP | MGI SNP Detail
Chr14:55835139fNfatc4 : 1196 bp downstream of1SNP  G        C                                     C/G
rs108756430
MPD | dbSNP | MGI SNP Detail
Chr14:55835161fNfatc4 : 1218 bp downstream of1SNP  T        G                                     G/T
rs52490486
MPD | dbSNP | MGI SNP Detail
Chr14:55835202fNfatc4 : 1259 bp downstream of2SNPA AAAA   G GGAG    G             AA     A A    G A/G
rs223212829
MPD | dbSNP | MGI SNP Detail
Chr14:55835230fNfatc4 : 1287 bp downstream of1SNP                   C              G              C/G
rs107890031
MPD | dbSNP | MGI SNP Detail
Chr14:55835298fNfatc4 : 1355 bp downstream of2SNP  T        C       C              T              C/T
rs256597670
MPD | dbSNP | MGI SNP Detail
Chr14:55835315fNfatc4 : 1372 bp downstream of1SNP                   T              C              C/T
rs51509331
MPD | dbSNP | MGI SNP Detail
Chr14:55835373fNfatc4 : 1430 bp downstream of3SNPTTTTTT   T AATA    A  A          TT     T T    A A/T
rs245640963
MPD | dbSNP | MGI SNP Detail
Chr14:55835419fNfatc4 : 1476 bp downstream of1SNP                   C              T              C/T
rs107849296
MPD | dbSNP | MGI SNP Detail
Chr14:55835452fNfatc4 : 1509 bp downstream of2SNP GG        A       A              G              A/G
rs232347846
MPD | dbSNP | MGI SNP Detail
Chr14:55835486fNfatc4 : 1543 bp downstream of1SNP                   C              T              C/T
rs257277356
MPD | dbSNP | MGI SNP Detail
Chr14:55835586fNfatc4 : 1643 bp downstream of1SNP                   T              C              C/T
rs108741950
MPD | dbSNP | MGI SNP Detail
Chr14:55835626fNfatc4 : 1683 bp downstream of2SNP CC        T       T              C              C/T
rs235294127
MPD | dbSNP | MGI SNP Detail
Chr14:55835645fNfatc4 : 1702 bp downstream of1SNP                   A              G              A/G
rs246748845
MPD | dbSNP | MGI SNP Detail
Chr14:55835667fNfatc4 : 1724 bp downstream of1SNP                   G              A              A/G
rs45673851
MPD | dbSNP | MGI SNP Detail
Chr14:55835816fNfatc4 : 1873 bp downstream of2SNP AA        G       G              A              A/G
rs45717684
MPD | dbSNP | MGI SNP Detail
Chr14:55835943fNfatc4 : 2000 bp downstream of1SNPT TTTT   T TTAT       T          T      T T    T A/T

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last database update
03/17/2015
MGI 5.21
The Jackson Laboratory