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Mouse SNPs
Query Results -- Summary
Genome Coordinate Discrepancy
The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details).
 Symbol
Name
ID
Cdan1
congenital dyserythropoietic anemia, type I (human)
MGI:1916218

37 matching SNPs displayed


Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs27454087
MPD | dbSNP | MGI SNP Detail
Chr2:120539956fCdan1 : Locus-Region1SNPA AAAA AAAAAAAAGAA/G
rs27454086
MPD | dbSNP | MGI SNP Detail
Chr2:120540064fCdan1 : Locus-Region2SNPAAAAAAGAAAGAAAAGAA/G
rs27454085
MPD | dbSNP | MGI SNP Detail
Chr2:120540523fCdan1 : Locus-Region2SNPGGG GGA G A G  AGA/G
rs33756677
MPD | dbSNP | MGI SNP Detail
Chr2:120540886fCdan1 : Locus-Region1SNP AA   C A        A/C
rs27454084
MPD | dbSNP | MGI SNP Detail
Chr2:120540889fCdan1 : Locus-Region1SNP     C A  A    AAA/C
rs29556792
MPD | dbSNP | MGI SNP Detail
Chr2:120541156fCdan1 : Locus-Region1SNPTTT   C T        C/T
rs27454083
MPD | dbSNP | MGI SNP Detail
Chr2:120541193fCdan1 : Locus-Region2SNPAAA   TAA TAAA TAA/T
rs27454082
MPD | dbSNP | MGI SNP Detail
Chr2:120541225fCdan1 : Locus-Region2SNPG GGGGAGGGAGGGGAGA/G
rs3664587
MPD | dbSNP | MGI SNP Detail
Chr2:120541992fCdan1 : mRNA-UTR2SNPTTT   C T        C/T
rs27454081
MPD | dbSNP | MGI SNP Detail
Chr2:120542115fCdan1 : mRNA-UTR1SNPG GGGG AGGGGGGGGGA/G
rs3666939
MPD | dbSNP | MGI SNP Detail
Chr2:120542366fCdan1 : mRNA-UTR2SNP GG G A G        A/G
rs3667505
MPD | dbSNP | MGI SNP Detail
Chr2:120542467fCdan1 : mRNA-UTR3SNPTTTTTTCTTTCTTTTCTC/T
rs27454080
MPD | dbSNP | MGI SNP Detail
Chr2:120543195fCdan1 : mRNA-UTR1SNPG GGGG GG AGGGGAGA/G
rs27454079
MPD | dbSNP | MGI SNP Detail
Chr2:120543768fCdan1 : mRNA-UTR2SNPAAAAA GAAAGAAAAGAA/G
rs27454078
MPD | dbSNP | MGI SNP Detail
Chr2:120543774fCdan1 : mRNA-UTR1SNPG G GC  G G   GGGC/G
rs13473594
MPD | dbSNP | MGI SNP Detail
Chr2:120544086rCdan1 : mRNA-UTR2SNPGGG GGA GGAGGGGAGA/G
rs32841986
MPD | dbSNP | MGI SNP Detail
Chr2:120544854fCdan1 : Intron1SNP GG   C G        C/G
rs27454077
MPD | dbSNP | MGI SNP Detail
Chr2:120545002fCdan1 : Intron2SNPC CCCCGCCCGCCCCGCC/G
rs27454076
MPD | dbSNP | MGI SNP Detail
Chr2:120545085fCdan1 : Intron2SNPA A A GAA G A AG A/G
rs29858509
MPD | dbSNP | MGI SNP Detail
Chr2:120545935fCdan1 : Intron1SNP  C   T C        C/T
rs33577466
MPD | dbSNP | MGI SNP Detail
Chr2:120545962fCdan1 : Intron1SNP  C   T C        C/T
rs33161419
MPD | dbSNP | MGI SNP Detail
Chr2:120546125fCdan1 : Intron1SNP  C   A C        A/C
rs27454075
MPD | dbSNP | MGI SNP Detail
Chr2:120548158fCdan1 : Intron1SNPT TTTT TTTTTTTTATA/T
rs27454074
MPD | dbSNP | MGI SNP Detail
Chr2:120548764fCdan1 : Intron2SNPGGGGGGCGGGCGG GCGC/G
rs27454073
MPD | dbSNP | MGI SNP Detail
Chr2:120549063fCdan1 : Intron2SNPTTTTTTCTTTCTTTTCTC/T
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs33700498
MPD | dbSNP | MGI SNP Detail
Chr2:120549233fCdan1 : Intron1SNPCCC   T          C/T
rs27454072
MPD | dbSNP | MGI SNP Detail
Chr2:120549793fCdan1 : Intron2SNPCCCCCCTCCCT CCCTCC/T
rs29719924
MPD | dbSNP | MGI SNP Detail
Chr2:120550033fCdan1 : Intron1SNP CC   G C        C/G
rs27454071
MPD | dbSNP | MGI SNP Detail
Chr2:120550293fCdan1 : Intron2SNPC CCCCACCCACCCCCCA/C
rs29672418
MPD | dbSNP | MGI SNP Detail
Chr2:120551037fCdan1 : Intron1SNP GG   A G        A/G
rs27454070
MPD | dbSNP | MGI SNP Detail
Chr2:120551059fCdan1 : Intron2SNPCCC CCT CCT CC TCC/T
rs33496064
MPD | dbSNP | MGI SNP Detail
Chr2:120552638fCdan1 : Intron1SNP TT   C T        C/T
rs29671879
MPD | dbSNP | MGI SNP Detail
Chr2:120553184fCdan1 : Intron1SNP  C   T C        C/T
rs32873231
MPD | dbSNP | MGI SNP Detail
Chr2:120553423fCdan1 : Intron1SNP  G   A G        A/G
rs29505402
MPD | dbSNP | MGI SNP Detail
Chr2:120554576fCdan1 : Intron1SNP AA   T A        A/T
rs29520489
MPD | dbSNP | MGI SNP Detail
Chr2:120557276fCdan1 : Locus-Region
Ttbk2 : Locus-Region
1SNP AA   T A        A/T
rs33601603
MPD | dbSNP | MGI SNP Detail
Chr2:120557314fCdan1 : Locus-Region
Ttbk2 : Locus-Region
1SNPTTT   C T        C/T

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
05/22/2013
MGI 5.13
The Jackson Laboratory