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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Alg2 asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase) MGI:1914731 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs27858443 MPD | dbSNP | MGI SNP Detail | Chr4:47480774 | f | Alg2 : Locus-Region | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C/T | |||
| rs27858442 MPD | dbSNP | MGI SNP Detail | Chr4:47481229 | f | Alg2 : Locus-Region | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A/G | |||
| rs27858441 MPD | dbSNP | MGI SNP Detail | Chr4:47481279 | f | Alg2 : Locus-Region | 1 | SNP | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | C/T | |||
| rs27858440 MPD | dbSNP | MGI SNP Detail | Chr4:47481363 | f | Alg2 : Locus-Region | 1 | SNP | C | C | C | C | C | C | C | C | A | C | C | C | C | C | C | A/C | |||
| rs27858439 MPD | dbSNP | MGI SNP Detail | Chr4:47481378 | f | Alg2 : Locus-Region | 1 | SNP | A | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A/C | |||
| rs27858438 MPD | dbSNP | MGI SNP Detail | Chr4:47481427 | f | Alg2 : Locus-Region | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | A/G | |||
| rs27858437 MPD | dbSNP | MGI SNP Detail | Chr4:47481440 | f | Alg2 : Locus-Region | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | A/G | |||
| rs27858436 MPD | dbSNP | MGI SNP Detail | Chr4:47481525 | f | Alg2 : Locus-Region | 1 | SNP | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | C/T | |||
| rs27858435 MPD | dbSNP | MGI SNP Detail | Chr4:47481570 | f | Alg2 : Locus-Region | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | A | A/G | |||
| rs27858434 MPD | dbSNP | MGI SNP Detail | Chr4:47481623 | f | Alg2 : Locus-Region | 1 | SNP | A | A | G | A | A | A | A | A | G | A | A | A | A | G | A | A/G | |||
| rs27858433 MPD | dbSNP | MGI SNP Detail | Chr4:47481677 | f | Alg2 : Locus-Region | 1 | SNP | T | T | G | T | T | G | T | T | G | T | T | T | T | G | G | G/T | |||
| rs6311855 MPD | dbSNP | MGI SNP Detail | Chr4:47481814 | f | Alg2 : Locus-Region | 3 | SNP | G | A | G | A | A | A | G | G | A | A | G | A | A | A | A | G | G | A/G | |
| rs6311938 MPD | dbSNP | MGI SNP Detail | Chr4:47481865 | f | Alg2 : Locus-Region | 2 | SNP | A | A | G | A | A | A | A | G | A | A | A | A | A | A | A | G | A | A/G | |
| rs6312376 MPD | dbSNP | MGI SNP Detail | Chr4:47481888 | f | Alg2 : Locus-Region | 2 | SNP | T | T | C | T | T | T | C | C | T | T | C | T | T | T | T | C | C | C/T | |
| rs27858432 MPD | dbSNP | MGI SNP Detail | Chr4:47482028 | f | Alg2 : Locus-Region | 1 | SNP | C | C | C | C | C | C | C | C | G | C | C | C | C | C | C | C/G | |||
| rs27858431 MPD | dbSNP | MGI SNP Detail | Chr4:47482114 | f | Alg2 : Locus-Region | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | A/G | |||
| rs6313563 MPD | dbSNP | MGI SNP Detail | Chr4:47482186 | f | Alg2 : Locus-Region | 2 | SNP | G | G | A | G | G | G | G | A | G | G | G | G | G | G | G | A | G | A/G | |
| rs27858430 MPD | dbSNP | MGI SNP Detail | Chr4:47482234 | f | Alg2 : Locus-Region | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | A | A/G | |||
| rs6314976 MPD | dbSNP | MGI SNP Detail | Chr4:47482391 | f | Alg2 : Locus-Region | 2 | SNP | C | T | T | C | T | C/T | |||||||||||||
| rs6315042 MPD | dbSNP | MGI SNP Detail | Chr4:47482428 | f | Alg2 : Locus-Region | 1 | SNP | C | T | C/T | ||||||||||||||||
| rs27858429 MPD | dbSNP | MGI SNP Detail | Chr4:47483550 | f | Alg2 : mRNA-UTR | 1 | SNP | G | G | A | G | G | A | G | G | A | G | G | G | G | A | A | A/G | |||
| rs27858428 MPD | dbSNP | MGI SNP Detail | Chr4:47483707 | f | Alg2 : mRNA-UTR | 1 | SNP | C | C | T | C | C | C | C | C | C | C | C | C | C | T | C | C/T | |||
| rs27858427 MPD | dbSNP | MGI SNP Detail | Chr4:47483737 | f | Alg2 : mRNA-UTR | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C/T | |||
| rs27858426 MPD | dbSNP | MGI SNP Detail | Chr4:47483781 | f | Alg2 : mRNA-UTR | 1 | SNP | T | C | T | T | T | T | T | T | T | T | T | T | T | C/T | |||||
| rs27858425 MPD | dbSNP | MGI SNP Detail | Chr4:47483852 | f | Alg2 : mRNA-UTR | 1 | SNP | A | A | G | A | A | A | A | A | A | A | A | A | A | G | A | A/G | |||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs27858424 MPD | dbSNP | MGI SNP Detail | Chr4:47483934 | f | Alg2 : mRNA-UTR | 1 | SNP | A | A | G | A | A | A | A | A | G | A | A | A | A | A | A/G | ||||
| rs32917987 MPD | dbSNP | MGI SNP Detail | Chr4:47484072 | f | Alg2 : mRNA-UTR | 1 | SNP | T | C | C | C | C/T | ||||||||||||||
| rs27858423 MPD | dbSNP | MGI SNP Detail | Chr4:47484208 | f | Alg2 : mRNA-UTR | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | T | C/T | |||
| rs27858422 MPD | dbSNP | MGI SNP Detail | Chr4:47484455 | f | Alg2 : Coding-Synonymous | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | A | A/G | |||
| rs27858421 MPD | dbSNP | MGI SNP Detail | Chr4:47484707 | f | Alg2 : Coding-Synonymous | 1 | SNP | G | G | A | G | G | G | G | G | G | G | G | G | G | A | G | A/G | |||
| rs27858420 MPD | dbSNP | MGI SNP Detail | Chr4:47484854 | f | Alg2 : Coding-Synonymous | 1 | SNP | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | C/T | |||
| rs27858419 MPD | dbSNP | MGI SNP Detail | Chr4:47485370 | f | Alg2 : Intron | 1 | SNP | T | T | C | T | T | T | T | T | C | T | T | T | T | T | C/T | ||||
| rs27858418 MPD | dbSNP | MGI SNP Detail | Chr4:47485388 | f | Alg2 : Intron | 1 | SNP | G | G | T | G | G | G | G | G | T | G | G | G | G | T | G | G/T | |||
| rs27858417 MPD | dbSNP | MGI SNP Detail | Chr4:47485659 | f | Alg2 : Intron Sec61b : Locus-Region | 1 | SNP | T | T | C | T | T | T | T | T | T | T | T | T | T | C | T | C/T | |||
| rs27858416 MPD | dbSNP | MGI SNP Detail | Chr4:47485729 | f | Alg2 : Intron Sec61b : Locus-Region | 1 | SNP | A | A | A | A | A | A | A | A | T | A | A | A | A | A | A | A/T | |||
| rs27858415 MPD | dbSNP | MGI SNP Detail | Chr4:47485806 | f | Alg2 : Intron Sec61b : Locus-Region | 1 | SNP | T | G | T | T | T | T | T | T | T | T | T | T | G | T | G/T | ||||
| rs27858414 MPD | dbSNP | MGI SNP Detail | Chr4:47486251 | f | Alg2 : Intron Sec61b : Locus-Region | 1 | SNP | T | T | A | T | T | T | T | T | A | T | T | T | T | A | T | A/T | |||
| rs27858413 MPD | dbSNP | MGI SNP Detail | Chr4:47486588 | f | Alg2 : Intron Sec61b : Locus-Region | 1 | SNP | A | A | A | A | A | A | A | A | G | A | A | A | A | G | A | A/G | |||
| rs27858412 MPD | dbSNP | MGI SNP Detail | Chr4:47486589 | f | Alg2 : Intron Sec61b : Locus-Region | 1 | SNP | T | T | A | T | T | T | T | T | T | T | T | T | T | A/T | |||||
| rs27858411 MPD | dbSNP | MGI SNP Detail | Chr4:47486683 | f | Alg2 : Intron Sec61b : Locus-Region | 1 | SNP | T | T | C | T | T | T | T | T | T | T | T | T | T | C | T | C/T | |||
| rs27858410 MPD | dbSNP | MGI SNP Detail | Chr4:47486692 | f | Alg2 : Intron Sec61b : Locus-Region | 1 | SNP | G | G | G | G | G | T | G | G | G | G | G | G | G | G | T | G/T | |||
| rs27858409 MPD | dbSNP | MGI SNP Detail | Chr4:47487075 | f | Alg2 : Coding-Synonymous Sec61b : Locus-Region | 1 | SNP | T | T | A | T | A | T | T | T | T | T | T | A | A | A/T | |||||
| rs27858408 MPD | dbSNP | MGI SNP Detail | Chr4:47487296 | f | Alg2 : Locus-Region Sec61b : Locus-Region | 1 | SNP | C | C | T | C | C | T | C | C | T | C | C | C | C | T | T | C/T | |||
| rs27858407 MPD | dbSNP | MGI SNP Detail | Chr4:47487341 | f | Alg2 : Locus-Region Sec61b : Locus-Region | 1 | SNP | C | C | G | C | C | G | C | C | C | C | C | C | G | G | C/G | ||||
| rs27858406 MPD | dbSNP | MGI SNP Detail | Chr4:47487442 | f | Alg2 : Locus-Region Sec61b : Locus-Region | 1 | SNP | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | C/T |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 05/08/2013 MGI 5.13 |
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