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Mouse SNPs
Query Results -- Summary
Genome Coordinate Discrepancy
The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details).
 Symbol
Name
ID
Shank3
SH3/ankyrin domain gene 3
MGI:1930016

118 matching SNPs displayed


Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs3720931
MPD | dbSNP | MGI SNP Detail
Chr15:89328897fShank3 : Locus-Region2SNPGG    A  A        A/G
rs31908277
MPD | dbSNP | MGI SNP Detail
Chr15:89333352fShank3 : Intron1SNPG GG   G GGAGGGG GA/G
rs31908279
MPD | dbSNP | MGI SNP Detail
Chr15:89333955fShank3 : Intron1SNPG GG   G GGAGGGG GA/G
rs31908281
MPD | dbSNP | MGI SNP Detail
Chr15:89334349fShank3 : Intron1SNPA AA   A AAGAAAA AA/G
rs31908283
MPD | dbSNP | MGI SNP Detail
Chr15:89334449fShank3 : Intron1SNPA AA   A AAGAAAA AA/G
rs31909065
MPD | dbSNP | MGI SNP Detail
Chr15:89334753fShank3 : Coding-Synonymous1SNPC T    T TC TC C TC/T
rs31909067
MPD | dbSNP | MGI SNP Detail
Chr15:89335041fShank3 : Intron1SNPC CC   C CCTCCCC CC/T
rs31909069
MPD | dbSNP | MGI SNP Detail
Chr15:89335174fShank3 : Intron1SNPC CC   C CCTCCCC CC/T
rs31843616
MPD | dbSNP | MGI SNP Detail
Chr15:89335499fShank3 : Intron2SNPTTA   AA ATTA  TTAA/T
rs31909072
MPD | dbSNP | MGI SNP Detail
Chr15:89335607fShank3 : Intron2SNPCCCC  CC TC CCCC CC/T
rs31909854
MPD | dbSNP | MGI SNP Detail
Chr15:89335697fShank3 : Intron1SNPT TT   T TTGTTTTGTG/T
rs31909856
MPD | dbSNP | MGI SNP Detail
Chr15:89336339fShank3 : Intron1SNPC CC   C CCTCCCC CC/T
rs31909858
MPD | dbSNP | MGI SNP Detail
Chr15:89337461fShank3 : Intron1SNPC CC   C CCTCCCCTCC/T
rs31909860
MPD | dbSNP | MGI SNP Detail
Chr15:89337491fShank3 : Intron1SNPT TT   T TTCTTTTCTC/T
rs31909862
MPD | dbSNP | MGI SNP Detail
Chr15:89337999fShank3 : Intron1SNPC CC   C CCTCCCC CC/T
rs31706165
MPD | dbSNP | MGI SNP Detail
Chr15:89341097fShank3 : Intron1SNPC T      T        C/T
rs32338064
MPD | dbSNP | MGI SNP Detail
Chr15:89341100fShank3 : Intron1SNPT T      C        C/T
rs31910744
MPD | dbSNP | MGI SNP Detail
Chr15:89341382fShank3 : Intron1SNPG GG   G GGTGGGG GG/T
rs31910745
MPD | dbSNP | MGI SNP Detail
Chr15:89341838fShank3 : Intron1SNPC  C   C CCGC CC CC/G
rs31910747
MPD | dbSNP | MGI SNP Detail
Chr15:89341878fShank3 : Intron1SNPA  A   A AAGA  A AA/G
rs31890801
MPD | dbSNP | MGI SNP Detail
Chr15:89342371fShank3 : Intron1SNPCCT   T  T        C/T
rs31910749
MPD | dbSNP | MGI SNP Detail
Chr15:89343169fShank3 : Intron1SNPT TTTT T TTCTTTTCTC/T
rs31910750
MPD | dbSNP | MGI SNP Detail
Chr15:89343296fShank3 : Intron1SNPC CCCC C CCGCCCCGCC/G
rs31910751
MPD | dbSNP | MGI SNP Detail
Chr15:89343398fShank3 : Intron1SNPA AAAA A AACAAAACAA/C
rs31910753
MPD | dbSNP | MGI SNP Detail
Chr15:89343868fShank3 : Intron1SNPC CCCC C CCTCCCCTCC/T
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs31911635
MPD | dbSNP | MGI SNP Detail
Chr15:89344303fShank3 : Intron1SNPG GGGG G GGAGGGGAGA/G
rs31911637
MPD | dbSNP | MGI SNP Detail
Chr15:89345343fShank3 : Intron1SNPC   CC C CC CCACACA/C
rs31904284
MPD | dbSNP | MGI SNP Detail
Chr15:89345419fShank3 : Intron1SNPA A AA A AATAAAATAA/T
rs31904286
MPD | dbSNP | MGI SNP Detail
Chr15:89345887fShank3 : Intron1SNPG GGGG G GGAGGGGAGA/G
rs31904288
MPD | dbSNP | MGI SNP Detail
Chr15:89346296fShank3 : Intron1SNPA AAG  A AAGAAAAGAA/G
rs31904289
MPD | dbSNP | MGI SNP Detail
Chr15:89346340fShank3 : Intron1SNPC CCCC C CCGCCCCGCC/G
rs31904290
MPD | dbSNP | MGI SNP Detail
Chr15:89346540fShank3 : Intron1SNPC CCCC C CCTCCCCTCC/T
rs6278673
MPD | dbSNP | MGI SNP Detail
Chr15:89346744fShank3 : Intron2SNPT TTTTTTCTTCTTTTCTC/T
rs6291475
MPD | dbSNP | MGI SNP Detail
Chr15:89346795fShank3 : Intron1SNP      T C         C/T
rs31904293
MPD | dbSNP | MGI SNP Detail
Chr15:89348611fShank3 : Intron1SNPT TTTT T TTCTTTTCTC/T
rs31905465
MPD | dbSNP | MGI SNP Detail
Chr15:89349142fShank3 : Intron1SNPG G AG G GGAGGGGAGA/G
rs31905467
MPD | dbSNP | MGI SNP Detail
Chr15:89350058fShank3 : Intron1SNPT  TTT T TTGTTTTGTG/T
rs31905469
MPD | dbSNP | MGI SNP Detail
Chr15:89350624fShank3 : Intron1SNPT TTTT T TTCTTTTCTC/T
rs31905471
MPD | dbSNP | MGI SNP Detail
Chr15:89350660fShank3 : Intron1SNPA AAA  A AAGAA AGAA/G
rs31905472
MPD | dbSNP | MGI SNP Detail
Chr15:89350692fShank3 : Intron1SNPC CCCC C CCACCCCACA/C
rs31905473
MPD | dbSNP | MGI SNP Detail
Chr15:89351613fShank3 : Coding-Synonymous1SNPA AAAA A AAGAAAAGAA/G
rs31906745
MPD | dbSNP | MGI SNP Detail
Chr15:89351854fShank3 : Intron1SNPG GGGG G GGGGGGGAGA/G
rs31906746
MPD | dbSNP | MGI SNP Detail
Chr15:89352171fShank3 : Intron1SNPA AAAA A AACAAAACAA/C
rs31906748
MPD | dbSNP | MGI SNP Detail
Chr15:89352403fShank3 : Intron1SNPA AAAA A AAGAAAAGAA/G
rs31906749
MPD | dbSNP | MGI SNP Detail
Chr15:89352485fShank3 : Intron1SNPA AAAA A AAGAAAAGAA/G
rs32503662
MPD | dbSNP | MGI SNP Detail
Chr15:89356578fShank3 : Intron1SNP  A      T        A/T
rs31809945
MPD | dbSNP | MGI SNP Detail
Chr15:89356718fShank3 : Intron1SNP GT      T        G/T
rs31906750
MPD | dbSNP | MGI SNP Detail
Chr15:89364488fShank3 : Intron1SNPT T T  T TT TT TC C/T
rs31906751
MPD | dbSNP | MGI SNP Detail
Chr15:89364699fShank3 : Intron1SNPA AAAA A AACAAAACAA/C
rs31906753
MPD | dbSNP | MGI SNP Detail
Chr15:89365095fShank3 : Intron1SNPT TTTT T TTCTTTTCTC/T
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs31907855
MPD | dbSNP | MGI SNP Detail
Chr15:89365176fShank3 : Intron1SNPA AAAA A AAGAAAAGAA/G
rs31907856
MPD | dbSNP | MGI SNP Detail
Chr15:89366135fShank3 : Intron1SNPC CCCC C CCTCCCCCCC/T
rs31907858
MPD | dbSNP | MGI SNP Detail
Chr15:89366291fShank3 : Intron1SNPC C CC C CCTCC CTCC/T
rs31907860
MPD | dbSNP | MGI SNP Detail
Chr15:89366612fShank3 : Intron1SNPC CCTC C CCCCCCCCCC/T
rs31907862
MPD | dbSNP | MGI SNP Detail
Chr15:89366827fShank3 : Intron1SNPC CCCC C CCTCCCCTCC/T
rs31908744
MPD | dbSNP | MGI SNP Detail
Chr15:89366988fShank3 : Intron1SNPA AAAA A AAGAA AGAA/G
rs31908746
MPD | dbSNP | MGI SNP Detail
Chr15:89367839fShank3 : Intron1SNPT TTTT T TTCTT TCTC/T
rs31908747
MPD | dbSNP | MGI SNP Detail
Chr15:89368562fShank3 : Intron1SNPC CCCC C CCGCCCCGCC/G
rs31908748
MPD | dbSNP | MGI SNP Detail
Chr15:89368664fShank3 : Intron1SNPT TTTT G TTGTTTTGTG/T
rs31908750
MPD | dbSNP | MGI SNP Detail
Chr15:89369049fShank3 : Intron1SNPG GGAG G GGAGGGGAGA/G
rs31908752
MPD | dbSNP | MGI SNP Detail
Chr15:89369411fShank3 : Intron1SNPA AAGA A AAAAA AAAA/G
rs31909814
MPD | dbSNP | MGI SNP Detail
Chr15:89369678fShank3 : Intron1SNPC CCTC T CCCCC CCCC/T
rs31909816
MPD | dbSNP | MGI SNP Detail
Chr15:89369889fShank3 : Intron1SNPA AAGA G AAAAAAAAAA/G
rs31909818
MPD | dbSNP | MGI SNP Detail
Chr15:89369941fShank3 : Intron1SNPA   AA A AATA  ATAA/T
rs31909820
MPD | dbSNP | MGI SNP Detail
Chr15:89369995fShank3 : Intron1SNPA AAAA T AAAAAAAAAA/T
rs31909822
MPD | dbSNP | MGI SNP Detail
Chr15:89370035fShank3 : Intron1SNPA AAAA G AAGAAAAGAA/G
rs31910684
MPD | dbSNP | MGI SNP Detail
Chr15:89370264fShank3 : Intron1SNPC CCTC C CCCCCCCCCC/T
rs31910686
MPD | dbSNP | MGI SNP Detail
Chr15:89370590fShank3 : Intron1SNPT TTTT T TTGTTTTGTG/T
rs31910688
MPD | dbSNP | MGI SNP Detail
Chr15:89370671fShank3 : Intron1SNPA AAAA G AAAAA AAAA/G
rs31910690
MPD | dbSNP | MGI SNP Detail
Chr15:89370795fShank3 : Intron1SNPT TTTT G TTGTTTTGTG/T
rs31910692
MPD | dbSNP | MGI SNP Detail
Chr15:89370810fShank3 : Intron1SNPT TTTT A TTTTTTTTTA/T
rs31911544
MPD | dbSNP | MGI SNP Detail
Chr15:89371045fShank3 : Intron1SNPT   CT C TT T  TCTC/T
rs31911546
MPD | dbSNP | MGI SNP Detail
Chr15:89371532fShank3 : Intron1SNPT TTTT C TT T TT TC/T
rs31911548
MPD | dbSNP | MGI SNP Detail
Chr15:89372276fShank3 : Intron1SNPG GGGG C GGCGG GCGC/G
rs31699365
MPD | dbSNP | MGI SNP Detail
Chr15:89372298fShank3 : Intron1SNP AG   G  G        A/G
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs31911550
MPD | dbSNP | MGI SNP Detail
Chr15:89373598fShank3 : Coding-Synonymous1SNPC CCCC C CCTCC CTCC/T
rs31911552
MPD | dbSNP | MGI SNP Detail
Chr15:89373652fShank3 : Coding-Synonymous1SNPT TTTT C TTTTT TTTC/T
rs31912124
MPD | dbSNP | MGI SNP Detail
Chr15:89374091fShank3 : Intron1SNPA AAAA C AACAAAACAA/C
rs31912126
MPD | dbSNP | MGI SNP Detail
Chr15:89374563fShank3 : Intron1SNPC CCCC C CCCCCCCTCC/T
rs31912128
MPD | dbSNP | MGI SNP Detail
Chr15:89374564fShank3 : Intron1SNPG GGGG A GGGGGGGGGA/G
rs31912130
MPD | dbSNP | MGI SNP Detail
Chr15:89374698fShank3 : Intron1SNPC CCCC C CC CCCCTCC/T
rs31909364
MPD | dbSNP | MGI SNP Detail
Chr15:89374787fShank3 : Intron1SNPA AAAA G AAAAAAAAAA/G
rs31909365
MPD | dbSNP | MGI SNP Detail
Chr15:89375038fShank3 : Intron1SNPA  AAA   AAGA  AGAA/G
rs31909367
MPD | dbSNP | MGI SNP Detail
Chr15:89375098fShank3 : Intron1SNPC CCTC C CCCCCCCCCC/T
rs31909369
MPD | dbSNP | MGI SNP Detail
Chr15:89375855fShank3 : Intron1SNPT  TTT C TTCTTTTCTC/T
rs31909371
MPD | dbSNP | MGI SNP Detail
Chr15:89376044fShank3 : Intron1SNPA   AA A  A AA AGAA/G
rs31909372
MPD | dbSNP | MGI SNP Detail
Chr15:89376333fShank3 : Intron1SNPG GGGG G GGGGGGGAGA/G
rs31909373
MPD | dbSNP | MGI SNP Detail
Chr15:89376463fShank3 : Intron1SNPC CCCC T CCCCC CCCC/T
rs31910464
MPD | dbSNP | MGI SNP Detail
Chr15:89376956fShank3 : Intron1SNPT  TTT T TTCT  TCTC/T
rs31910465
MPD | dbSNP | MGI SNP Detail
Chr15:89376988fShank3 : Intron1SNPT TTTT T TTCTTTTCTC/T
rs31910467
MPD | dbSNP | MGI SNP Detail
Chr15:89377045fShank3 : Intron1SNPC  CCC C CCTC CCTCC/T
rs31910469
MPD | dbSNP | MGI SNP Detail
Chr15:89377176fShank3 : Intron1SNPG   G  G GGGG  GAGA/G
rs31910471
MPD | dbSNP | MGI SNP Detail
Chr15:89377224fShank3 : Intron1SNPT   TT T TT T TTGTG/T
rs31910472
MPD | dbSNP | MGI SNP Detail
Chr15:89377288fShank3 : Intron1SNPT TTTT T TTTTTTTCTC/T
rs31911464
MPD | dbSNP | MGI SNP Detail
Chr15:89377361fShank3 : Intron1SNPT   TT T TTGT  TGTG/T
rs31911466
MPD | dbSNP | MGI SNP Detail
Chr15:89377457fShank3 : Intron1SNPC   CC C CCCC  CTCC/T
rs31911468
MPD | dbSNP | MGI SNP Detail
Chr15:89378022fShank3 : Intron1SNPT   TT T  T T   C C/T
rs31911470
MPD | dbSNP | MGI SNP Detail
Chr15:89380005fShank3 : Coding-Synonymous1SNPG GGGG G GG G  GT G/T
rs31911471
MPD | dbSNP | MGI SNP Detail
Chr15:89380895fShank3 : Intron1SNPC   CC T CCCC  CC C/T
rs31911473
MPD | dbSNP | MGI SNP Detail
Chr15:89380939fShank3 : Intron1SNPA   AA T AAAA  AA A/T
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs31912195
MPD | dbSNP | MGI SNP Detail
Chr15:89380962fShank3 : Intron1SNPA   AA G AAGAA AGAA/G
rs31912196
MPD | dbSNP | MGI SNP Detail
Chr15:89381401fShank3 : Intron1SNPA  AAA A AAGA AAGAA/G
rs31912198
MPD | dbSNP | MGI SNP Detail
Chr15:89381554fShank3 : Intron1SNPT TTTT C TTTTTTTTTC/T
rs31912200
MPD | dbSNP | MGI SNP Detail
Chr15:89381807fShank3 : Intron1SNPC C CC   CCTCC CTCC/T
rs31912201
MPD | dbSNP | MGI SNP Detail
Chr15:89383182fShank3 : Intron2SNPCCTCCTTC CCCTCCCC C/T
rs31912202
MPD | dbSNP | MGI SNP Detail
Chr15:89383910fShank3 : Intron1SNPG   GG C  G G  GG C/G
rs31913214
MPD | dbSNP | MGI SNP Detail
Chr15:89384863fShank3 : Intron1SNPG GGGG A GGGGGGG GA/G
rs31913216
MPD | dbSNP | MGI SNP Detail
Chr15:89384868fShank3 : Intron1SNPG  GGG   GGAGGGG GA/G
rs31913217
MPD | dbSNP | MGI SNP Detail
Chr15:89384870fShank3 : Intron1SNPA AAAA G AAAAAAAGAA/G
rs31913219
MPD | dbSNP | MGI SNP Detail
Chr15:89384900fShank3 : Intron1SNPT   TT C TTTT TTTTC/T
rs31913220
MPD | dbSNP | MGI SNP Detail
Chr15:89384926fShank3 : Intron1SNPT TTTT C TTTTTTTT C/T
rs31913222
MPD | dbSNP | MGI SNP Detail
Chr15:89384935fShank3 : Intron1SNPT   TT T TT T TTCTC/T
rs31914124
MPD | dbSNP | MGI SNP Detail
Chr15:89384945fShank3 : Intron1SNPC   CC A CC C  CC A/C
rs31914126
MPD | dbSNP | MGI SNP Detail
Chr15:89385151fShank3 : Intron1SNPG GGGG G GGAGG GAGA/G
rs31914128
MPD | dbSNP | MGI SNP Detail
Chr15:89385208fShank3 : Intron1SNPC  CCC C CCCC CCTCC/T
rs31914130
MPD | dbSNP | MGI SNP Detail
Chr15:89385441fShank3 : Intron1SNPC CCCC C CCC   CTCC/T
rs31914132
MPD | dbSNP | MGI SNP Detail
Chr15:89385542fShank3 : Intron1SNPG   GG A GG G  GA A/G
rs31915004
MPD | dbSNP | MGI SNP Detail
Chr15:89385959fShank3 : Intron1SNPT   TT T TTCT  TC C/T

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last database update
05/22/2013
MGI 5.13
The Jackson Laboratory