About   Help   FAQ
Mouse SNPs
Query Results -- Summary
Genome Coordinate Discrepancy
The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details).
 Symbol
Name
ID
Pla2g6
phospholipase A2, group VI
MGI:1859152

129 matching SNPs displayed


Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs31596037
MPD | dbSNP | MGI SNP Detail
Chr15:79114720fBaiap2l2 : Intron
Pla2g6 : Locus-Region
1SNPT TTT  T TTCT TTCTC/T
rs31596039
MPD | dbSNP | MGI SNP Detail
Chr15:79114720fBaiap2l2 : Intron
Pla2g6 : Locus-Region
1SNP  T    T  C C    TC/T
rs31596041
MPD | dbSNP | MGI SNP Detail
Chr15:79114850fBaiap2l2 : Intron
Pla2g6 : Locus-Region
1SNPG GGGG G GGAGGGGAGA/G
rs32398553
MPD | dbSNP | MGI SNP Detail
Chr15:79114863fBaiap2l2 : Intron
Pla2g6 : Locus-Region
1SNP TC   C  C        C/T
rs32106297
MPD | dbSNP | MGI SNP Detail
Chr15:79114905fBaiap2l2 : Intron
Pla2g6 : Locus-Region
1SNP AG   G  G        A/G
rs31596043
MPD | dbSNP | MGI SNP Detail
Chr15:79115218fBaiap2l2 : Intron
Pla2g6 : Locus-Region
1SNPA AAAA   AAG AAAGAA/G
rs31596775
MPD | dbSNP | MGI SNP Detail
Chr15:79116248fBaiap2l2 : Locus-Region
Pla2g6 : Locus-Region
1SNPA AAAA A AAGAAAAGAA/G
rs32168375
MPD | dbSNP | MGI SNP Detail
Chr15:79116910fPla2g6 : mRNA-UTR1SNP A    G  G        A/G
rs6409856
MPD | dbSNP | MGI SNP Detail
Chr15:79117358fPla2g6 : Intron2SNPA AAAAA GAAGAAAAGAA/G
rs6409978
MPD | dbSNP | MGI SNP Detail
Chr15:79117441fPla2g6 : Intron1SNP      C A         A/C
rs32516290
MPD | dbSNP | MGI SNP Detail
Chr15:79118503fPla2g6 : Intron1SNP GC   C  C        C/G
rs32202824
MPD | dbSNP | MGI SNP Detail
Chr15:79118514fPla2g6 : Intron1SNP GA   A  A        A/G
rs31830850
MPD | dbSNP | MGI SNP Detail
Chr15:79118539fPla2g6 : Intron1SNP GC   C  C        C/G
rs32229047
MPD | dbSNP | MGI SNP Detail
Chr15:79118572fPla2g6 : Intron1SNP CG   G  G        C/G
rs31596778
MPD | dbSNP | MGI SNP Detail
Chr15:79118671fPla2g6 : Intron1SNPC CCCC C CCTCCCCTCC/T
rs31596779
MPD | dbSNP | MGI SNP Detail
Chr15:79118842fPla2g6 : Intron1SNPT TTTT   TTCTTTTCTC/T
rs32270074
MPD | dbSNP | MGI SNP Detail
Chr15:79118927fPla2g6 : Intron1SNP TG      G        G/T
rs31842757
MPD | dbSNP | MGI SNP Detail
Chr15:79119200fPla2g6 : Intron1SNP CA               A/C
rs31596781
MPD | dbSNP | MGI SNP Detail
Chr15:79119364fPla2g6 : Intron1SNPC CCCC   CCT CCCTCC/T
rs31596783
MPD | dbSNP | MGI SNP Detail
Chr15:79119468fPla2g6 : Intron1SNPC CCCC   CCTCCCCTCC/T
rs31597635
MPD | dbSNP | MGI SNP Detail
Chr15:79119540fPla2g6 : Intron1SNPG AAAA   AAG   AGAA/G
rs31597637
MPD | dbSNP | MGI SNP Detail
Chr15:79120152fPla2g6 : Intron2SNPGGAAAAAA AAG AAAGAA/G
rs31597639
MPD | dbSNP | MGI SNP Detail
Chr15:79120229fPla2g6 : Intron1SNPC CCCC C CCTCCCCTCC/T
rs31597641
MPD | dbSNP | MGI SNP Detail
Chr15:79120382fPla2g6 : Intron2SNPGGAAAAAA AAGAAAAGAA/G
rs31597642
MPD | dbSNP | MGI SNP Detail
Chr15:79120816fPla2g6 : Intron1SNPA AAAA   AAGAAAAGAA/G
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs32149562
MPD | dbSNP | MGI SNP Detail
Chr15:79121440fPla2g6 : Intron1SNP GA               A/G
rs31598234
MPD | dbSNP | MGI SNP Detail
Chr15:79122403fPla2g6 : Intron1SNPG GGGG G GGAGGGGAGA/G
rs31598236
MPD | dbSNP | MGI SNP Detail
Chr15:79122841fPla2g6 : Intron1SNPC CCCC C CCGCCCCGCC/G
rs31598238
MPD | dbSNP | MGI SNP Detail
Chr15:79123431fPla2g6 : Intron1SNP       A   G    G A/G
rs32435599
MPD | dbSNP | MGI SNP Detail
Chr15:79123437fPla2g6 : Intron1SNP AG   G  G        A/G
rs31595209
MPD | dbSNP | MGI SNP Detail
Chr15:79123477fPla2g6 : Intron1SNP TC   C  C        C/T
rs31598240
MPD | dbSNP | MGI SNP Detail
Chr15:79123670fPla2g6 : Intron1SNP       T   C    CTC/T
rs32134836
MPD | dbSNP | MGI SNP Detail
Chr15:79123736fPla2g6 : Intron1SNP AG   G           A/G
rs31598242
MPD | dbSNP | MGI SNP Detail
Chr15:79124811fPla2g6 : Intron1SNP       A   G    G A/G
rs32519706
MPD | dbSNP | MGI SNP Detail
Chr15:79126089fPla2g6 : Intron1SNP AG   G  G        A/G
rs32388238
MPD | dbSNP | MGI SNP Detail
Chr15:79127311fPla2g6 : Intron1SNP AC   C  C        A/C
rs31598243
MPD | dbSNP | MGI SNP Detail
Chr15:79127398fPla2g6 : Intron1SNP  C    C   A    ACA/C
rs32295107
MPD | dbSNP | MGI SNP Detail
Chr15:79127425fPla2g6 : Intron1SNP TC      C        C/T
rs31599125
MPD | dbSNP | MGI SNP Detail
Chr15:79127468fPla2g6 : Intron1SNP       T   C    C C/T
rs31599127
MPD | dbSNP | MGI SNP Detail
Chr15:79127537fPla2g6 : Intron1SNP       C   T    C C/T
rs32467275
MPD | dbSNP | MGI SNP Detail
Chr15:79127617fPla2g6 : Intron1SNP TC   C           C/T
rs31599129
MPD | dbSNP | MGI SNP Detail
Chr15:79127854fPla2g6 : Coding-Synonymous1SNP       G   A    A A/G
rs31905186
MPD | dbSNP | MGI SNP Detail
Chr15:79128502fPla2g6 : Intron1SNPCCT   T  T        C/T
rs31599131
MPD | dbSNP | MGI SNP Detail
Chr15:79129869fPla2g6 : Intron1SNP       T   C    C C/T
rs31599133
MPD | dbSNP | MGI SNP Detail
Chr15:79129914fPla2g6 : Intron1SNP       G   A    A A/G
rs31599835
MPD | dbSNP | MGI SNP Detail
Chr15:79130116fPla2g6 : Intron1SNP       T   A    ATA/T
rs32031431
MPD | dbSNP | MGI SNP Detail
Chr15:79130236fPla2g6 : Intron1SNPT G      G        G/T
rs31599837
MPD | dbSNP | MGI SNP Detail
Chr15:79130400fPla2g6 : Intron1SNP       T   A    A A/T
rs31599839
MPD | dbSNP | MGI SNP Detail
Chr15:79130438fPla2g6 : Intron1SNP       G   A    A A/G
rs31613768
MPD | dbSNP | MGI SNP Detail
Chr15:79130756fPla2g6 : Intron1SNP  G   A  G        A/G
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs31599841
MPD | dbSNP | MGI SNP Detail
Chr15:79131040fPla2g6 : Intron1SNP       C   T    TCC/T
rs31599843
MPD | dbSNP | MGI SNP Detail
Chr15:79131512fPla2g6 : Intron1SNP  G    A   G   AGAA/G
rs31592586
MPD | dbSNP | MGI SNP Detail
Chr15:79131639fPla2g6 : Intron1SNP TC   C  C        C/T
rs32265711
MPD | dbSNP | MGI SNP Detail
Chr15:79131818fPla2g6 : Intron1SNP A    G  G        A/G
rs31600645
MPD | dbSNP | MGI SNP Detail
Chr15:79131874fPla2g6 : Intron1SNP       T   C    C C/T
rs31600647
MPD | dbSNP | MGI SNP Detail
Chr15:79132083fPla2g6 : Intron1SNP       A   G    G A/G
rs31600649
MPD | dbSNP | MGI SNP Detail
Chr15:79132476fPla2g6 : Intron1SNP       A   G    G A/G
rs31600651
MPD | dbSNP | MGI SNP Detail
Chr15:79133539fPla2g6 : Intron1SNPG GGGG G GGA  GGAGA/G
rs32228575
MPD | dbSNP | MGI SNP Detail
Chr15:79133801fPla2g6 : Intron1SNP AT   T  T        A/T
rs31600653
MPD | dbSNP | MGI SNP Detail
Chr15:79133953fPla2g6 : Intron1SNP       C   T    TTC/T
rs31601555
MPD | dbSNP | MGI SNP Detail
Chr15:79134089fPla2g6 : Intron1SNP       T   C    C C/T
rs31601557
MPD | dbSNP | MGI SNP Detail
Chr15:79134273fPla2g6 : Intron1SNP       A   G    GAA/G
rs31601559
MPD | dbSNP | MGI SNP Detail
Chr15:79134554fPla2g6 : Intron1SNP       G   A    A A/G
rs31912542
MPD | dbSNP | MGI SNP Detail
Chr15:79137066fPla2g6 : Intron1SNP TC   C  C        C/T
rs32364353
MPD | dbSNP | MGI SNP Detail
Chr15:79137296fPla2g6 : Intron1SNP TA   A  A        A/T
rs32081821
MPD | dbSNP | MGI SNP Detail
Chr15:79139327fPla2g6 : Intron1SNP TC   C  C        C/T
rs31635310
MPD | dbSNP | MGI SNP Detail
Chr15:79141840fPla2g6 : Intron1SNP TC   C  C        C/T
rs31722712
MPD | dbSNP | MGI SNP Detail
Chr15:79141893fPla2g6 : Intron1SNP GA   A           A/G
rs31837676
MPD | dbSNP | MGI SNP Detail
Chr15:79142026fPla2g6 : Intron1SNP TC   C           C/T
rs31601561
MPD | dbSNP | MGI SNP Detail
Chr15:79142275fPla2g6 : Coding-Synonymous1SNPT   G  T  T TT   TG/T
rs32153727
MPD | dbSNP | MGI SNP Detail
Chr15:79142577fPla2g6 : Intron1SNP AA   G  A        A/G
rs31601563
MPD | dbSNP | MGI SNP Detail
Chr15:79142708fPla2g6 : Intron2SNPAAGGG GG GG  G G GA/G
rs31602325
MPD | dbSNP | MGI SNP Detail
Chr15:79143416fPla2g6 : Coding-Synonymous2SNPGGAAA    AA GA   AA/G
rs32402562
MPD | dbSNP | MGI SNP Detail
Chr15:79144037fPla2g6 : Intron1SNP AT   T           A/T
rs31786064
MPD | dbSNP | MGI SNP Detail
Chr15:79144617fPla2g6 : Intron1SNP TT   C  T        C/T
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs31602326
MPD | dbSNP | MGI SNP Detail
Chr15:79144845fPla2g6 : Intron1SNPA TTTT T TTTATTTTTA/T
rs31602328
MPD | dbSNP | MGI SNP Detail
Chr15:79144974fPla2g6 : Intron2SNPAAAAAAGG AAGAAAAGAA/G
rs32125796
MPD | dbSNP | MGI SNP Detail
Chr15:79145419fPla2g6 : Intron1SNP TT   C  T        C/T
rs31596125
MPD | dbSNP | MGI SNP Detail
Chr15:79145673fPla2g6 : Intron1SNPT TTTT A TTTTTTTTTA/T
rs31596127
MPD | dbSNP | MGI SNP Detail
Chr15:79145732fPla2g6 : Intron1SNPC CCCC C CCTCCCCCCC/T
rs31596129
MPD | dbSNP | MGI SNP Detail
Chr15:79145853fPla2g6 : Intron1SNPA    A A AATA  ATAA/T
rs31596131
MPD | dbSNP | MGI SNP Detail
Chr15:79145854fPla2g6 : Intron2SNPG AAAAGG AAGGAAAGAA/G
rs31557258
MPD | dbSNP | MGI SNP Detail
Chr15:79145868fPla2g6 : Intron2SNPC TTTTCC TTCCTTTCTC/T
rs31596974
MPD | dbSNP | MGI SNP Detail
Chr15:79145889fPla2g6 : Intron1SNPT CCCC T CCTTCCCTCC/T
rs32004361
MPD | dbSNP | MGI SNP Detail
Chr15:79145919fPla2g6 : Intron1SNP AG   G  G        A/G
rs31596975
MPD | dbSNP | MGI SNP Detail
Chr15:79146145fPla2g6 : Intron1SNPC CCCC T CCCCCCCCCC/T
rs31974119
MPD | dbSNP | MGI SNP Detail
Chr15:79146399fPla2g6 : Intron1SNP CT   C  T        C/T
rs32154154
MPD | dbSNP | MGI SNP Detail
Chr15:79146681fPla2g6 : Intron1SNP AG      G        A/G
rs31596977
MPD | dbSNP | MGI SNP Detail
Chr15:79146947fPla2g6 : Intron2SNPGGAAAAGG AAGGAAAGAA/G
rs31596979
MPD | dbSNP | MGI SNP Detail
Chr15:79147254fPla2g6 : Intron1SNPC CCCC T CCCCCCCCCC/T
rs31596981
MPD | dbSNP | MGI SNP Detail
Chr15:79147496fPla2g6 : Intron1SNPA AAAA C AAAAAAAAAA/C
rs31596983
MPD | dbSNP | MGI SNP Detail
Chr15:79147661fPla2g6 : Intron1SNPA GGGG G GGGAGGGGGA/G
rs31597665
MPD | dbSNP | MGI SNP Detail
Chr15:79148001fPla2g6 : Intron1SNPG  GG  A GGGG  G GA/G
rs31597667
MPD | dbSNP | MGI SNP Detail
Chr15:79148033fPla2g6 : Intron2SNPT CCC TT  CT      C/T
rs31597669
MPD | dbSNP | MGI SNP Detail
Chr15:79148574fPla2g6 : Intron1SNPC CCCC C  CTCCC  CC/T
rs32030480
MPD | dbSNP | MGI SNP Detail
Chr15:79149242fPla2g6 : Intron1SNP  T   C           C/T
rs33858901
MPD | dbSNP | MGI SNP Detail
Chr15:79149772fPla2g6 : Intron1SNP CT      T        C/T
rs31597671
MPD | dbSNP | MGI SNP Detail
Chr15:79150264fPla2g6 : Intron1SNP   AA  C AAAA    AA/C
rs31597672
MPD | dbSNP | MGI SNP Detail
Chr15:79150287fPla2g6 : Intron1SNP  GGG    GGAG    GA/G
rs31961597
MPD | dbSNP | MGI SNP Detail
Chr15:79150299fPla2g6 : Intron1SNP TC   C  C        C/T
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs31879851
MPD | dbSNP | MGI SNP Detail
Chr15:79150341fPla2g6 : Intron1SNP TT   A  T        A/T
rs31813619
MPD | dbSNP | MGI SNP Detail
Chr15:79151002fPla2g6 : Intron1SNP AC   C  C        A/C
rs31868574
MPD | dbSNP | MGI SNP Detail
Chr15:79151032fPla2g6 : Intron1SNP AG   G  G        A/G
rs31661434
MPD | dbSNP | MGI SNP Detail
Chr15:79151325fPla2g6 : Intron1SNP AG      G        A/G
rs32003361
MPD | dbSNP | MGI SNP Detail
Chr15:79151575fPla2g6 : Intron1SNP AG   A           A/G
rs31598344
MPD | dbSNP | MGI SNP Detail
Chr15:79152062fPla2g6 : Intron1SNPA AAAA G AAG   A AA/G
rs31699395
MPD | dbSNP | MGI SNP Detail
Chr15:79152348fPla2g6 : Intron1SNP GA      A        A/G
rs31995055
MPD | dbSNP | MGI SNP Detail
Chr15:79152469fPla2g6 : Intron1SNP TG   G  G        G/T
rs31800124
MPD | dbSNP | MGI SNP Detail
Chr15:79153240fPla2g6 : Intron1SNPAAC   C  C        A/C
rs31598346
MPD | dbSNP | MGI SNP Detail
Chr15:79153243fPla2g6 : Intron1SNP  TTTT C TTT   T TC/T
rs32100168
MPD | dbSNP | MGI SNP Detail
Chr15:79153648fPla2g6 : Intron1SNPT C      C        C/T
rs32536703
MPD | dbSNP | MGI SNP Detail
Chr15:79153792fPla2g6 : Intron1SNPC T      T        C/T
rs31557692
MPD | dbSNP | MGI SNP Detail
Chr15:79153875fPla2g6 : Intron1SNPA G      G        A/G
rs31598348
MPD | dbSNP | MGI SNP Detail
Chr15:79154343fPla2g6 : Intron1SNPG GGG  T GGGGGGGGGG/T
rs31598350
MPD | dbSNP | MGI SNP Detail
Chr15:79154650fPla2g6 : Intron1SNP  CCCC C CCTC C  CC/T
rs32138980
MPD | dbSNP | MGI SNP Detail
Chr15:79155051fPla2g6 : Intron1SNPCCT   C           C/T
rs31942076
MPD | dbSNP | MGI SNP Detail
Chr15:79155062fPla2g6 : Intron1SNPAAG   G           A/G
rs31598352
MPD | dbSNP | MGI SNP Detail
Chr15:79155342fPla2g6 : Intron1SNPT TTTT C TTTTTTT TC/T
rs31599174
MPD | dbSNP | MGI SNP Detail
Chr15:79155648fPla2g6 : Intron1SNPC CCCC C CCTCCCC CC/T
rs31834634
MPD | dbSNP | MGI SNP Detail
Chr15:79155946fPla2g6 : Intron1SNP GG   T  G        G/T
rs32362614
MPD | dbSNP | MGI SNP Detail
Chr15:79156275fPla2g6 : Intron1SNP GA               A/G
rs31761650
MPD | dbSNP | MGI SNP Detail
Chr15:79156317fPla2g6 : Intron1SNP AG               A/G
rs32214916
MPD | dbSNP | MGI SNP Detail
Chr15:79156541fPla2g6 : Intron1SNP CT      T        C/T
rs31914112
MPD | dbSNP | MGI SNP Detail
Chr15:79157463fPla2g6 : Intron1SNP TT   C  T        C/T
rs31599176
MPD | dbSNP | MGI SNP Detail
Chr15:79157879fPla2g6 : Intron1SNP  CCC  A CCCCCC  CA/C
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs31555197
MPD | dbSNP | MGI SNP Detail
Chr15:79158763fPla2g6 : Locus-Region1SNP CA   A  A        A/C
rs31599178
MPD | dbSNP | MGI SNP Detail
Chr15:79158803fPla2g6 : Locus-Region1SNPC CCCC C CCT CCC CC/T
rs32099615
MPD | dbSNP | MGI SNP Detail
Chr15:79158872fPla2g6 : Locus-Region1SNP CC   T  C        C/T
rs31599180
MPD | dbSNP | MGI SNP Detail
Chr15:79158977fPla2g6 : Locus-Region1SNPT CCCC T CCTTCCCTCC/T

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
05/08/2013
MGI 5.13
The Jackson Laboratory