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Mouse SNPs
Query Results -- Summary
Genome Coordinate Discrepancy
The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details).
 Symbol
Name
ID
Celsr2
cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila)
MGI:1858235

102 matching SNPs displayed


Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs29602909
MPD | dbSNP | MGI SNP Detail
Chr3:108191992fCelsr2 : Locus-Region1SNPTTTTT   TTCTTTT TC/T
rs31569811
MPD | dbSNP | MGI SNP Detail
Chr3:108193205fCelsr2 : Locus-Region1SNPAG   G  G        A/G
rs29602912
MPD | dbSNP | MGI SNP Detail
Chr3:108193243fCelsr2 : Locus-Region1SNPCCCCC C CCTCCCCCCC/T
rs29603835
MPD | dbSNP | MGI SNP Detail
Chr3:108193662fCelsr2 : Locus-Region1SNPGGGGG   GGAGGG  GA/G
rs29603838
MPD | dbSNP | MGI SNP Detail
Chr3:108193688fCelsr2 : Locus-Region1SNPCCCCC   CCTCCCC CC/T
rs29603841
MPD | dbSNP | MGI SNP Detail
Chr3:108194047fCelsr2 : mRNA-UTR1SNPTTTTT G TTGTTTGGTG/T
rs29604834
MPD | dbSNP | MGI SNP Detail
Chr3:108194118fCelsr2 : mRNA-UTR1SNPTTTTT   TTCTTTT TC/T
rs29604837
MPD | dbSNP | MGI SNP Detail
Chr3:108194149fCelsr2 : mRNA-UTR1SNPAAAAA   AATAAAA AA/T
rs29604840
MPD | dbSNP | MGI SNP Detail
Chr3:108194639fCelsr2 : mRNA-UTR1SNPCCCCC   CCCCCCCTCC/T
rs29604843
MPD | dbSNP | MGI SNP Detail
Chr3:108195013fCelsr2 : mRNA-UTR1SNPTTTTT T TTGTTTTTTG/T
rs6304080
MPD | dbSNP | MGI SNP Detail
Chr3:108195107fCelsr2 : mRNA-UTR1SNP     A T         A/T
rs29605696
MPD | dbSNP | MGI SNP Detail
Chr3:108196395fCelsr2 : Coding-NonSynonymous1SNPAAAGA   AAGAAA GAA/G
rs29605699
MPD | dbSNP | MGI SNP Detail
Chr3:108197318fCelsr2 : Intron1SNPAAAAA   AAGAAGAGAA/G
rs29605702
MPD | dbSNP | MGI SNP Detail
Chr3:108197863fCelsr2 : Coding-Synonymous1SNPGGGGG A GGGGGGGAGA/G
rs29606595
MPD | dbSNP | MGI SNP Detail
Chr3:108198082fCelsr2 : Coding-Synonymous1SNPAAAAA G AAGAAA GAA/G
rs29606598
MPD | dbSNP | MGI SNP Detail
Chr3:108198531fCelsr2 : Coding-NonSynonymous1SNPCCCCC C CCTCCCCCCC/T
rs29606601
MPD | dbSNP | MGI SNP Detail
Chr3:108198568fCelsr2 : Coding-Synonymous1SNPCCCCC G CCCCCCGGCC/G
rs29607434
MPD | dbSNP | MGI SNP Detail
Chr3:108198586fCelsr2 : Coding-Synonymous1SNPGGGGG G GGAGGGGGGA/G
rs29607437
MPD | dbSNP | MGI SNP Detail
Chr3:108199423fCelsr2 : Coding-Synonymous1SNPTTTTT T TTATTTTTTA/T
rs29607440
MPD | dbSNP | MGI SNP Detail
Chr3:108199721fCelsr2 : Coding-Synonymous1SNPGGGGG G GGAGGGGGGA/G
rs29607443
MPD | dbSNP | MGI SNP Detail
Chr3:108199920fCelsr2 : Coding-Synonymous1SNPGGGGG G GGGGGGGAGA/G
rs29608426
MPD | dbSNP | MGI SNP Detail
Chr3:108200130fCelsr2 : Intron1SNPCCCCC C CCTCCCCCCC/T
rs29608429
MPD | dbSNP | MGI SNP Detail
Chr3:108200350fCelsr2 : Intron1SNPCCCCC C CCTCCCCCCC/T
rs29608432
MPD | dbSNP | MGI SNP Detail
Chr3:108200413fCelsr2 : Intron1SNPCCCCC C C C CCTC C/T
rs29609325
MPD | dbSNP | MGI SNP Detail
Chr3:108201077fCelsr2 : Intron1SNPAAAAA C AACAAACCAA/C
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs29609328
MPD | dbSNP | MGI SNP Detail
Chr3:108201112fCelsr2 : Intron1SNPTTTTT C TTCTTTCCTC/T
rs29609331
MPD | dbSNP | MGI SNP Detail
Chr3:108201238fCelsr2 : Intron1SNPCCCCC T CCCCCCTTCC/T
rs29610224
MPD | dbSNP | MGI SNP Detail
Chr3:108201414fCelsr2 : Coding-Synonymous1SNPGGGGG A GGGGGGGAGA/G
rs29610227
MPD | dbSNP | MGI SNP Detail
Chr3:108201585fCelsr2 : Coding-Synonymous1SNPCCCCC C CCGCCCCCCC/G
rs29610230
MPD | dbSNP | MGI SNP Detail
Chr3:108201925fCelsr2 : Intron1SNPGGGGG G GGAGGGGGGA/G
rs29610233
MPD | dbSNP | MGI SNP Detail
Chr3:108201948fCelsr2 : Intron1SNPCCCCC C CCTCCCCCCC/T
rs29635896
MPD | dbSNP | MGI SNP Detail
Chr3:108202182fCelsr2 : Intron1SNPGGGGG G GGAGGGGGGA/G
rs29635899
MPD | dbSNP | MGI SNP Detail
Chr3:108202198fCelsr2 : Intron1SNPCCCCC C CCTCCCCCCC/T
rs29635902
MPD | dbSNP | MGI SNP Detail
Chr3:108202322fCelsr2 : Intron1SNPCCCCC T CCCCCCTTCC/T
rs29636795
MPD | dbSNP | MGI SNP Detail
Chr3:108202575fCelsr2 : Coding-Synonymous1SNPGGGGG A GGGGGGAAGA/G
rs29636798
MPD | dbSNP | MGI SNP Detail
Chr3:108202605fCelsr2 : Coding-Synonymous1SNPCCCCC T CCCCC TTCC/T
rs29636801
MPD | dbSNP | MGI SNP Detail
Chr3:108202640fCelsr2 : Intron1SNPTTTTT A TTTTTTTATA/T
rs29637744
MPD | dbSNP | MGI SNP Detail
Chr3:108202752fCelsr2 : Intron1SNPCCCCC C CCGCCCCCCC/G
rs29637747
MPD | dbSNP | MGI SNP Detail
Chr3:108202763fCelsr2 : Intron1SNPCCCCC T CCCCCCTTCC/T
rs29637750
MPD | dbSNP | MGI SNP Detail
Chr3:108203273fCelsr2 : Intron1SNPTTTTT A TT TTTAATA/T
rs29637753
MPD | dbSNP | MGI SNP Detail
Chr3:108203317fCelsr2 : Intron1SNPCC C  T C T CC T C/T
rs29638676
MPD | dbSNP | MGI SNP Detail
Chr3:108203749fCelsr2 : Coding-Synonymous1SNPGGGGG A GGGGGGAAGA/G
rs29638679
MPD | dbSNP | MGI SNP Detail
Chr3:108205832fCelsr2 : Intron1SNPTTTTT   TTCTTTCCTC/T
rs29638682
MPD | dbSNP | MGI SNP Detail
Chr3:108206707fCelsr2 : Intron1SNPGGGGG G GGAGGGGGGA/G
rs29639405
MPD | dbSNP | MGI SNP Detail
Chr3:108206802fCelsr2 : Intron1SNPAAAAA G AAGAA GG A/G
rs29639408
MPD | dbSNP | MGI SNP Detail
Chr3:108207162fCelsr2 : Intron1SNPAAAAA G AAGAAAGGAA/G
rs29639411
MPD | dbSNP | MGI SNP Detail
Chr3:108207232fCelsr2 : Intron1SNPTTTTT C TTCTTTCCTC/T
rs29640354
MPD | dbSNP | MGI SNP Detail
Chr3:108208168fCelsr2 : Intron1SNPAAAAA G AAGAA  G A/G
rs29640357
MPD | dbSNP | MGI SNP Detail
Chr3:108208411fCelsr2 : Intron1SNPAAAAA T AA AA TTAA/T
rs29640360
MPD | dbSNP | MGI SNP Detail
Chr3:108208515fCelsr2 : Intron1SNPTTTTT C TTCTTT CTC/T
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs29640363
MPD | dbSNP | MGI SNP Detail
Chr3:108209040fCelsr2 : Intron1SNPAAAAA A AAGAA AAAA/G
rs29641116
MPD | dbSNP | MGI SNP Detail
Chr3:108209180fCelsr2 : Intron1SNPTTTTT C TTCTTT CTC/T
rs29641119
MPD | dbSNP | MGI SNP Detail
Chr3:108209243fCelsr2 : Intron1SNPCCCCC T CC CCCTCCC/T
rs29641122
MPD | dbSNP | MGI SNP Detail
Chr3:108209256fCelsr2 : Intron1SNPGGGGG A GG GGGAAGA/G
rs29641735
MPD | dbSNP | MGI SNP Detail
Chr3:108209721fCelsr2 : Coding-NonSynonymous1SNPCCCCC C CCTCC CCCC/T
rs29641738
MPD | dbSNP | MGI SNP Detail
Chr3:108209743fCelsr2 : Coding-Synonymous1SNPTTTTT T TTGTTTTTTG/T
rs29641741
MPD | dbSNP | MGI SNP Detail
Chr3:108209837fCelsr2 : Coding-Synonymous1SNPGGGGG A GGAGGG AGA/G
rs29642604
MPD | dbSNP | MGI SNP Detail
Chr3:108209906fCelsr2 : Coding-Synonymous1SNPGGGGG A GGGGGGGGGA/G
rs29642607
MPD | dbSNP | MGI SNP Detail
Chr3:108210284fCelsr2 : Coding-Synonymous1SNPCCCCC A CCCCCCCCCA/C
rs29642610
MPD | dbSNP | MGI SNP Detail
Chr3:108210373fCelsr2 : Intron1SNPGGGGG A GGAGGG AGA/G
rs29642613
MPD | dbSNP | MGI SNP Detail
Chr3:108210482fCelsr2 : Intron1SNPGGGGG A GGAGGGAAGA/G
rs29643606
MPD | dbSNP | MGI SNP Detail
Chr3:108210514fCelsr2 : Intron1SNPAAAAA G AAGAAAGGAA/G
rs29643609
MPD | dbSNP | MGI SNP Detail
Chr3:108210527fCelsr2 : Intron1SNPGGGGG G GGAGGGGGGA/G
rs29643612
MPD | dbSNP | MGI SNP Detail
Chr3:108210722fCelsr2 : Intron1SNPGGGGG A GG GGG AGA/G
rs29601905
MPD | dbSNP | MGI SNP Detail
Chr3:108210976fCelsr2 : Intron1SNPGGGGG A GGGGG  AGA/G
rs29601908
MPD | dbSNP | MGI SNP Detail
Chr3:108210982fCelsr2 : Intron1SNPAAAAA G AAGAAA  AA/G
rs29601911
MPD | dbSNP | MGI SNP Detail
Chr3:108211129fCelsr2 : Intron1SNPTTTTT G TTGTT GGTG/T
rs29602714
MPD | dbSNP | MGI SNP Detail
Chr3:108211303fCelsr2 : Intron1SNPCCCCC C CCTCCCCCCC/T
rs29602717
MPD | dbSNP | MGI SNP Detail
Chr3:108211304fCelsr2 : Intron1SNPGGGGG G GGGGGGGAGA/G
rs29602720
MPD | dbSNP | MGI SNP Detail
Chr3:108211397fCelsr2 : Intron1SNPGGGGG G GGAGGGGGGA/G
rs29602723
MPD | dbSNP | MGI SNP Detail
Chr3:108211435fCelsr2 : Intron1SNPAAAAA A AAAAAAAGAA/G
rs29603647
MPD | dbSNP | MGI SNP Detail
Chr3:108211488fCelsr2 : Intron1SNPCC CC T CCTCCCTC C/T
rs29603650
MPD | dbSNP | MGI SNP Detail
Chr3:108211834fCelsr2 : Intron1SNPCCCCC C CCCCC CACA/C
rs29603653
MPD | dbSNP | MGI SNP Detail
Chr3:108211945fCelsr2 : Intron1SNPCCCCC T CCTCCCTT C/T
rs29604536
MPD | dbSNP | MGI SNP Detail
Chr3:108212001fCelsr2 : Intron1SNPCCCCC T CCTCCCTT C/T
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs29604539
MPD | dbSNP | MGI SNP Detail
Chr3:108212372fCelsr2 : Intron1SNPGGGGG A GGGGGGAGGA/G
rs29604542
MPD | dbSNP | MGI SNP Detail
Chr3:108212415fCelsr2 : Intron1SNPCCCCC T CCCCC  T C/T
rs29605425
MPD | dbSNP | MGI SNP Detail
Chr3:108212428fCelsr2 : Intron1SNPCCCCC C CCTCCCCCCC/T
rs29605428
MPD | dbSNP | MGI SNP Detail
Chr3:108212455fCelsr2 : Intron1SNPTTTTT   TTCTTTTCTC/T
rs29605431
MPD | dbSNP | MGI SNP Detail
Chr3:108212479fCelsr2 : Intron1SNPAAAAA G AAGAAA GAA/G
rs29606324
MPD | dbSNP | MGI SNP Detail
Chr3:108212579fCelsr2 : Intron1SNPTTTTT T TTCTTTTTTC/T
rs29606327
MPD | dbSNP | MGI SNP Detail
Chr3:108212669fCelsr2 : Intron1SNPCCCCC T CC CC TTCC/T
rs29606330
MPD | dbSNP | MGI SNP Detail
Chr3:108212708fCelsr2 : Intron1SNPAAAAA T AAAAAATTAA/T
rs29606333
MPD | dbSNP | MGI SNP Detail
Chr3:108213261fCelsr2 : Intron1SNPGGGGG C GGGGGGCCGC/G
rs29607366
MPD | dbSNP | MGI SNP Detail
Chr3:108213619fCelsr2 : Intron1SNPGGGGG C GGGGGGCCGC/G
rs29607369
MPD | dbSNP | MGI SNP Detail
Chr3:108214016fCelsr2 : Intron1SNPAAAAA T AAAAAATTAA/T
rs29607372
MPD | dbSNP | MGI SNP Detail
Chr3:108214060fCelsr2 : Intron1SNPCCCCC T CCCCC  T C/T
rs29608325
MPD | dbSNP | MGI SNP Detail
Chr3:108214234fCelsr2 : Intron1SNPCCCCC T CCCCCCTTCC/T
rs29608328
MPD | dbSNP | MGI SNP Detail
Chr3:108214590fCelsr2 : Intron1SNPAAAG    AA AA  GAA/G
rs29608331
MPD | dbSNP | MGI SNP Detail
Chr3:108214696fCelsr2 : Intron1SNPTTTTT C TTTTTTCCTC/T
rs29609214
MPD | dbSNP | MGI SNP Detail
Chr3:108215323fCelsr2 : Coding-Synonymous1SNPAAAAA G AAGAA GG A/G
rs29609217
MPD | dbSNP | MGI SNP Detail
Chr3:108215494fCelsr2 : Coding-Synonymous1SNPTTTGT G TTGTT GGTG/T
rs29609220
MPD | dbSNP | MGI SNP Detail
Chr3:108216034fCelsr2 : Coding-Synonymous1SNPGGGGG A GGGGGGAA A/G
rs29609223
MPD | dbSNP | MGI SNP Detail
Chr3:108216037fCelsr2 : Coding-Synonymous1SNPAAAAA A AAGAA AAAA/G
rs29610086
MPD | dbSNP | MGI SNP Detail
Chr3:108216055fCelsr2 : Coding-Synonymous1SNPAAAAA G AAGAAAGGAA/G
rs29610089
MPD | dbSNP | MGI SNP Detail
Chr3:108216394fCelsr2 : Coding-Synonymous1SNPTTTTT C TTTTTTCCTC/T
rs29610092
MPD | dbSNP | MGI SNP Detail
Chr3:108216562fCelsr2 : Coding-Synonymous1SNPAAAAA A AACAAAAAAA/C
rs29635315
MPD | dbSNP | MGI SNP Detail
Chr3:108216606fCelsr2 : Coding-NonSynonymous1SNPCCCCC C CCTCCCCCCC/T
rs29635318
MPD | dbSNP | MGI SNP Detail
Chr3:108217108fCelsr2 : Coding-Synonymous1SNPGGGGG A GGGGG  AAA/G
rs6256892
MPD | dbSNP | MGI SNP Detail
Chr3:108218733fCelsr2 : Locus-Region1SNP     C G         C/G
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs6256905
MPD | dbSNP | MGI SNP Detail
Chr3:108218743fCelsr2 : Locus-Region1SNP     C T         C/T
rs6257837
MPD | dbSNP | MGI SNP Detail
Chr3:108218887fCelsr2 : Locus-Region1SNP     G C         C/G

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last database update
05/08/2013
MGI 5.13
The Jackson Laboratory