|
Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
|
Symbol Name ID |
C1ra complement component 1, r subcomponent A MGI:1355313 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs48134852 MPD | dbSNP | MGI SNP Detail | Chr6:124461202 | f | C1ra : Locus-Region | 1 | SNP | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A/G | ||||
| rs48378616 MPD | dbSNP | MGI SNP Detail | Chr6:124461233 | f | C1ra : Locus-Region | 1 | SNP | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A/G | ||||
| rs47519218 MPD | dbSNP | MGI SNP Detail | Chr6:124461782 | f | C1ra : Locus-Region | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | A/C | |||
| rs46175030 MPD | dbSNP | MGI SNP Detail | Chr6:124462132 | f | C1ra : Locus-Region | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C/T | |||
| rs48517295 MPD | dbSNP | MGI SNP Detail | Chr6:124462210 | f | C1ra : Locus-Region | 1 | SNP | A | A | A | A | A | A | A | A | C | A | A | A | A | A | A | A/C | |||
| rs51991366 MPD | dbSNP | MGI SNP Detail | Chr6:124462459 | f | C1ra : mRNA-UTR | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A/G | |||
| rs50965339 MPD | dbSNP | MGI SNP Detail | Chr6:124462592 | f | C1ra : mRNA-UTR | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A/G | |||
| rs48283263 MPD | dbSNP | MGI SNP Detail | Chr6:124462917 | f | C1ra : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | A/G | |||
| rs49439266 MPD | dbSNP | MGI SNP Detail | Chr6:124463072 | f | C1ra : Intron | 1 | SNP | A | A | A | A | A | T | A | A | T | A | A | A | A | T | A/T | ||||
| rs49827647 MPD | dbSNP | MGI SNP Detail | Chr6:124463273 | f | C1ra : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | |||
| rs48931061 MPD | dbSNP | MGI SNP Detail | Chr6:124463280 | f | C1ra : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | C | G | C/G | |||
| rs46949783 MPD | dbSNP | MGI SNP Detail | Chr6:124463348 | f | C1ra : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | C | T | C/T | ||||
| rs51733466 MPD | dbSNP | MGI SNP Detail | Chr6:124463878 | f | C1ra : Coding-NonSynonymous | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | T | C/T | |||||
| rs46457722 MPD | dbSNP | MGI SNP Detail | Chr6:124464519 | f | C1ra : Intron | 1 | SNP | C | C | C | C | C | G | C | C | G | C | C | C | G | C/G | |||||
| rs50225560 MPD | dbSNP | MGI SNP Detail | Chr6:124464575 | f | C1ra : Intron | 1 | SNP | G | G | G | A | A | A | G | G | A | A/G | |||||||||
| rs47991004 MPD | dbSNP | MGI SNP Detail | Chr6:124467198 | f | C1ra : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | T | C | C | C | C/T | |||
| rs48296480 MPD | dbSNP | MGI SNP Detail | Chr6:124467295 | f | C1ra : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | |||
| rs49412490 MPD | dbSNP | MGI SNP Detail | Chr6:124467560 | f | C1ra : Intron | 1 | SNP | A | A | G | G | A | A | G | A | A | A/G | |||||||||
| rs48283782 MPD | dbSNP | MGI SNP Detail | Chr6:124467578 | f | C1ra : Intron | 1 | SNP | C | C | G | G | C | C | G | C | C/G | ||||||||||
| rs33893791 MPD | dbSNP | MGI SNP Detail | Chr6:124468051 | f | C1ra : Intron | 2 | SNP | C | A | A | A | A | C | A | A | A | A | A | C | C | A | A | A | A/C | ||
| rs33893585 MPD | dbSNP | MGI SNP Detail | Chr6:124468322 | f | C1ra : Intron | 1 | SNP | A | A | G | A | G | A/G | |||||||||||||
| rs51380664 MPD | dbSNP | MGI SNP Detail | Chr6:124469000 | f | C1ra : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | |||
| rs46312207 MPD | dbSNP | MGI SNP Detail | Chr6:124469387 | f | C1ra : Coding-Synonymous | 1 | SNP | G | G | G | G | G | C | G | G | G | G | C | G | C/G | ||||||
| rs13459162 MPD | dbSNP | MGI SNP Detail | Chr6:124469409 | f | C1ra : Coding-NonSynonymous | 3 | SNP | C | C | C | C | A | C | C | C | C | C | A | A | C | C | C | A/C | |||
| rs51143203 MPD | dbSNP | MGI SNP Detail | Chr6:124469416 | f | C1ra : Coding-NonSynonymous | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | ||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs51588488 MPD | dbSNP | MGI SNP Detail | Chr6:124469553 | f | C1ra : Intron | 1 | SNP | C | C | C | C | C | A | C | C | C | C | C | C | C | A/C | |||||
| rs46446842 MPD | dbSNP | MGI SNP Detail | Chr6:124469834 | f | C1ra : Coding-NonSynonymous | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | |||
| rs45712284 MPD | dbSNP | MGI SNP Detail | Chr6:124469944 | f | C1ra : Intron | 1 | SNP | G | G | G | G | G | G | G | G | C | G | G | G | G | G | G | C/G | |||
| rs49348179 MPD | dbSNP | MGI SNP Detail | Chr6:124470015 | f | C1ra : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | C | C/T | |||
| rs46992445 MPD | dbSNP | MGI SNP Detail | Chr6:124470148 | f | C1ra : Intron | 1 | SNP | G | G | G | G | A | A | G | G | A | G | A/G | ||||||||
| rs46558929 MPD | dbSNP | MGI SNP Detail | Chr6:124470351 | f | C1ra : Intron | 1 | SNP | A | A | A | T | A | A | A | A | A | A | A | A/T | |||||||
| rs33893961 MPD | dbSNP | MGI SNP Detail | Chr6:124470631 | f | C1ra : Intron | 1 | SNP | G | T | G | T | G/T | ||||||||||||||
| rs46679941 MPD | dbSNP | MGI SNP Detail | Chr6:124471268 | f | C1ra : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | T | C | C | C | C/T | ||||
| rs49219416 MPD | dbSNP | MGI SNP Detail | Chr6:124471371 | f | C1ra : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | A | G | A/G | |||
| rs29828809 MPD | dbSNP | MGI SNP Detail | Chr6:124471424 | f | C1ra : Intron | 1 | SNP | G | T | G | T | G/T | ||||||||||||||
| rs30954582 MPD | dbSNP | MGI SNP Detail | Chr6:124471449 | f | C1ra : Intron | 2 | SNP | G | G | A | A | A | A | G | A | A | A | A | A | G | A | A | A/G | |||
| rs48658877 MPD | dbSNP | MGI SNP Detail | Chr6:124471738 | f | C1ra : Intron | 1 | SNP | A | G | G | A | A | A | G | A | A | A/G | |||||||||
| rs49709598 MPD | dbSNP | MGI SNP Detail | Chr6:124472468 | f | C1ra : Coding-NonSynonymous | 1 | SNP | A | A | A | A | A | A | A | A | C | A | A | A | A | C | A | A/C | |||
| rs50094885 MPD | dbSNP | MGI SNP Detail | Chr6:124472551 | f | C1ra : Coding-Synonymous | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C/T | |||
| rs47685416 MPD | dbSNP | MGI SNP Detail | Chr6:124472708 | f | C1ra : Coding-NonSynonymous | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | |||
| rs48180287 MPD | dbSNP | MGI SNP Detail | Chr6:124473097 | f | C1ra : mRNA-UTR | 1 | SNP | A | A | A | A | A | A | A | A | C | A | A | A | A | C | A | A/C | |||
| rs45765599 MPD | dbSNP | MGI SNP Detail | Chr6:124473143 | f | C1ra : Locus-Region | 1 | SNP | T | T | T | T | T | T | T | T | A | T | T | T | T | A | T | A/T | |||
| rs49284752 MPD | dbSNP | MGI SNP Detail | Chr6:124473155 | f | C1ra : Locus-Region | 1 | SNP | T | T | T | T | T | T | T | T | C | T | T | T | T | C | T | C/T | |||
| rs45913866 MPD | dbSNP | MGI SNP Detail | Chr6:124473174 | f | C1ra : Locus-Region | 1 | SNP | T | T | T | T | T | T | T | T | C | T | T | T | T | C | T | C/T | |||
| rs30512793 MPD | dbSNP | MGI SNP Detail | Chr6:124473534 | f | C1ra : Locus-Region | 2 | SNP | C | T | T | T | T | C | C | T | T | C | T | C | C | T | C | C | C/T | ||
| rs46778502 MPD | dbSNP | MGI SNP Detail | Chr6:124473602 | f | C1ra : Locus-Region | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A/G |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
||
|
Citing These Resources Funding Information Warranty Disclaimer & Copyright Notice Send questions and comments to User Support. |
last database update 05/08/2013 MGI 5.13 |
|
|
|
||
Analysis Tools