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Mouse SNPs
Query Results -- Summary
Genome Coordinate Discrepancy
The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details).
 Symbol
Name
ID
Naglu
alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)
MGI:1351641

38 matching SNPs displayed


Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs27089349
MPD | dbSNP | MGI SNP Detail
Chr11:100931179fNaglu : Locus-Region2SNPC ACCCCCCCCC  CCCCCA/C
rs27089348
MPD | dbSNP | MGI SNP Detail
Chr11:100931207fNaglu : Locus-Region1SNPT TTTT CTTCT  TTTCTC/T
rs27089347
MPD | dbSNP | MGI SNP Detail
Chr11:100931232fNaglu : Locus-Region1SNPG GGGG AGGAG  GGGAGA/G
rs27089346
MPD | dbSNP | MGI SNP Detail
Chr11:100931301fNaglu : Locus-Region1SNPT TTTT CTTCT  TTTCTC/T
rs27089345
MPD | dbSNP | MGI SNP Detail
Chr11:100931322fNaglu : Locus-Region1SNPC CCCC TCCCC  CCCCCC/T
rs27089344
MPD | dbSNP | MGI SNP Detail
Chr11:100931540fNaglu : Coding-Synonymous1SNPG GCGG GGGGG  GGGGGC/G
rs27089343
MPD | dbSNP | MGI SNP Detail
Chr11:100931924fNaglu : Intron1SNPG GGGG AGGGG  GGGGGA/G
rs27089342
MPD | dbSNP | MGI SNP Detail
Chr11:100932185fNaglu : Intron1SNPG GTGG  GGG   GGGGGG/T
rs27089341
MPD | dbSNP | MGI SNP Detail
Chr11:100932236fNaglu : Intron1SNPT TTTT CTTTT  TTTTTC/T
rs27089340
MPD | dbSNP | MGI SNP Detail
Chr11:100932310fNaglu : Intron1SNPA GGAA AAAAA  AAAAAA/G
rs27089339
MPD | dbSNP | MGI SNP Detail
Chr11:100933024fNaglu : Intron1SNPG GGGG AGGAG  GGGAGA/G
rs27089338
MPD | dbSNP | MGI SNP Detail
Chr11:100933442fNaglu : Intron1SNPC CCCC  CCA   CCCA A/C
rs27089337
MPD | dbSNP | MGI SNP Detail
Chr11:100933687fNaglu : Intron1SNPG GGGG GGGAG  GGGAGA/G
rs27089336
MPD | dbSNP | MGI SNP Detail
Chr11:100933698fNaglu : Intron2SNPC TCCC CCCCC  CCCCCC/T
rs27089335
MPD | dbSNP | MGI SNP Detail
Chr11:100934530fNaglu : Intron1SNPA AAAA GAAGA  AAAGAA/G
rs27089334
MPD | dbSNP | MGI SNP Detail
Chr11:100934839fNaglu : Intron1SNPT TTTT CTTCT  TTTCTC/T
rs27089333
MPD | dbSNP | MGI SNP Detail
Chr11:100934871fNaglu : Intron1SNPT TTTT CTTTT  TTTTTC/T
rs27089332
MPD | dbSNP | MGI SNP Detail
Chr11:100934946fNaglu : Intron1SNPT TTTT TTTCT  TTTCTC/T
rs27089331
MPD | dbSNP | MGI SNP Detail
Chr11:100935114fNaglu : Intron2SNPGGAGGGGGGGGG  GGGGGA/G
rs29468351
MPD | dbSNP | MGI SNP Detail
Chr11:100935381fNaglu : Coding-NonSynonymous1SNP GA   G G          A/G
rs29384104
MPD | dbSNP | MGI SNP Detail
Chr11:100936528fNaglu : Intron1SNP  C   T T          C/T
rs29477147
MPD | dbSNP | MGI SNP Detail
Chr11:100936578fNaglu : Intron1SNP  A   G G          A/G
rs29415494
MPD | dbSNP | MGI SNP Detail
Chr11:100936615fNaglu : Intron1SNP  G   A A          A/G
rs27089330
MPD | dbSNP | MGI SNP Detail
Chr11:100937392fNaglu : Intron1SNPC CCCC ACCAC  CCCACA/C
rs27089329
MPD | dbSNP | MGI SNP Detail
Chr11:100937440fNaglu : Intron1SNPC CCCC CCCTC  CCCTCC/T
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs27089328
MPD | dbSNP | MGI SNP Detail
Chr11:100937467fNaglu : Intron1SNPG GGGG GGGAG  GGGAGA/G
rs27089327
MPD | dbSNP | MGI SNP Detail
Chr11:100937516fNaglu : Intron1SNPC CCCC TCCCC  CCCCCC/T
rs27089326
MPD | dbSNP | MGI SNP Detail
Chr11:100937655fNaglu : Coding-Synonymous1SNPC CCCC CCCTC  CCCCCC/T
rs4229093
MPD | dbSNP | MGI SNP Detail
Chr11:100937823fHsd17b1 : Locus-Region
Naglu : Coding-Synonymous
1SNP  T TTTTT   CT     C/T
rs27089325
MPD | dbSNP | MGI SNP Detail
Chr11:100937973fHsd17b1 : Locus-Region
Naglu : Coding-Synonymous
1SNPC CCCC CCCTC  CCCTCC/T
rs4229094
MPD | dbSNP | MGI SNP Detail
Chr11:100937982fHsd17b1 : Locus-Region
Naglu : Coding-Synonymous
1SNP  C CCCCC   TC     C/T
rs27089324
MPD | dbSNP | MGI SNP Detail
Chr11:100938114fHsd17b1 : Locus-Region
Naglu : Coding-Synonymous
1SNPC CCCC ACCCC  CCCCCA/C
rs27089323
MPD | dbSNP | MGI SNP Detail
Chr11:100938555fHsd17b1 : Locus-Region
Naglu : Coding-Synonymous
1SNPC CCCC ACCAC  CCCA A/C
rs27089322
MPD | dbSNP | MGI SNP Detail
Chr11:100938696fHsd17b1 : Locus-Region
Naglu : Coding-Synonymous
1SNPG GGGG GGGAG  GGGGGA/G
rs27089321
MPD | dbSNP | MGI SNP Detail
Chr11:100938875fHsd17b1 : Locus-Region
Naglu : mRNA-UTR
1SNPA AAAA GAAA   AAAAAA/G
rs27089320
MPD | dbSNP | MGI SNP Detail
Chr11:100939022fHsd17b1 : Locus-Region
Naglu : Locus-Region
1SNPG GGGG AGGAG  GGGAGA/G
rs27089319
MPD | dbSNP | MGI SNP Detail
Chr11:100939041fHsd17b1 : Locus-Region
Naglu : Locus-Region
1SNPA AAAA GAAAA  AAAAAA/G
rs27089318
MPD | dbSNP | MGI SNP Detail
Chr11:100939431fHsd17b1 : Locus-Region
Naglu : Locus-Region
1SNPG GGGG  GGAG  GGGAGA/G

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
05/22/2013
MGI 5.13
The Jackson Laboratory