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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Prnp prion protein MGI:97769 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs27242152 MPD | dbSNP | MGI SNP Detail | Chr2:131736109 | f | Prnp : Intron | 1 | SNP | T | T | T | T | T | A | T | T | T | T | T | T | T | T | A/T | |||
| rs27242151 MPD | dbSNP | MGI SNP Detail | Chr2:131736205 | f | Prnp : Intron | 1 | SNP | G | G | G | G | C | G | G | G | G | G | G | C | C | C/G | ||||
| rs27242150 MPD | dbSNP | MGI SNP Detail | Chr2:131736256 | f | Prnp : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | G | C/G | ||||
| rs27242149 MPD | dbSNP | MGI SNP Detail | Chr2:131736283 | f | Prnp : Intron | 1 | SNP | G | G | G | G | A | G | G | G | G | G | G | A | A | A/G | ||||
| rs27242148 MPD | dbSNP | MGI SNP Detail | Chr2:131736328 | f | Prnp : Intron | 1 | SNP | A | A | A | A | G | A | A | A | A | A | A | A | A | A/G | ||||
| rs6326824 MPD | dbSNP | MGI SNP Detail | Chr2:131736410 | f | Prnp : Intron | 1 | SNP | A | T | A/T | |||||||||||||||
| rs27242147 MPD | dbSNP | MGI SNP Detail | Chr2:131736519 | f | Prnp : Intron | 1 | SNP | A | A | A | A | G | A | A | A | A | A | A | A | A | A/G | ||||
| rs27242146 MPD | dbSNP | MGI SNP Detail | Chr2:131736564 | f | Prnp : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | A | A | A/G | ||||
| rs27242145 MPD | dbSNP | MGI SNP Detail | Chr2:131736573 | f | Prnp : Intron | 1 | SNP | A | A | A | A | G | A | A | A | A | A | A | A | A | A/G | ||||
| rs27242144 MPD | dbSNP | MGI SNP Detail | Chr2:131736981 | f | Prnp : Intron | 1 | SNP | A | A | A | A | C | A | A | A | A | A | A | A | A | A/C | ||||
| rs27242143 MPD | dbSNP | MGI SNP Detail | Chr2:131736998 | f | Prnp : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | A | A | A/G | ||||
| rs27242142 MPD | dbSNP | MGI SNP Detail | Chr2:131737054 | f | Prnp : Intron | 1 | SNP | C | C | C | C | A | C | C | C | C | C | C | A | A | A/C | ||||
| rs27242141 MPD | dbSNP | MGI SNP Detail | Chr2:131737303 | f | Prnp : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | T | T | C/T | ||||
| rs27242140 MPD | dbSNP | MGI SNP Detail | Chr2:131737402 | f | Prnp : Intron | 1 | SNP | G | G | G | G | C | G | G | G | G | G | G | C | C | C/G | ||||
| rs27242139 MPD | dbSNP | MGI SNP Detail | Chr2:131737431 | f | Prnp : Intron | 1 | SNP | G | G | G | G | G | G | G | A | G | G | G | G | G | A/G | ||||
| rs27242138 MPD | dbSNP | MGI SNP Detail | Chr2:131737452 | f | Prnp : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | T | T | C/T | ||||
| rs27242137 MPD | dbSNP | MGI SNP Detail | Chr2:131737569 | f | Prnp : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | A | A | A/G | ||||
| rs27242136 MPD | dbSNP | MGI SNP Detail | Chr2:131737618 | f | Prnp : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | A | A | A/T | ||||
| rs27242135 MPD | dbSNP | MGI SNP Detail | Chr2:131737765 | f | Prnp : Intron | 1 | SNP | T | T | T | T | G | T | T | T | T | T | T | T | T | G/T | ||||
| rs27242134 MPD | dbSNP | MGI SNP Detail | Chr2:131737809 | f | Prnp : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | T | T | A/T | ||||
| rs27242133 MPD | dbSNP | MGI SNP Detail | Chr2:131737825 | f | Prnp : Intron | 1 | SNP | C | C | C | C | T | C | C | C | C | C | C | C | C | C/T | ||||
| rs27242132 MPD | dbSNP | MGI SNP Detail | Chr2:131737850 | f | Prnp : Intron | 1 | SNP | G | G | G | G | A | G | G | G | G | G | G | A | A | A/G | ||||
| rs27242131 MPD | dbSNP | MGI SNP Detail | Chr2:131738038 | f | Prnp : Intron | 1 | SNP | C | C | C | C | T | C | C | C | C | C | C | C | C | C/T | ||||
| rs27242130 MPD | dbSNP | MGI SNP Detail | Chr2:131738120 | f | Prnp : Intron | 1 | SNP | C | C | C | C | T | C | C | C | C | C | C | C | C | C/T | ||||
| rs27242129 MPD | dbSNP | MGI SNP Detail | Chr2:131738158 | f | Prnp : Intron | 1 | SNP | G | G | G | G | C | G | G | C | C | G | G | C | C | C/G | ||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs27242128 MPD | dbSNP | MGI SNP Detail | Chr2:131738208 | f | Prnp : Intron | 1 | SNP | C | C | C | C | T | C | C | C | C | C | C | C | C | C/T | ||||
| rs27242127 MPD | dbSNP | MGI SNP Detail | Chr2:131738312 | f | Prnp : Intron | 1 | SNP | T | T | T | T | T | G | G | T | T | G | G | G/T | ||||||
| rs27242126 MPD | dbSNP | MGI SNP Detail | Chr2:131738588 | f | Prnp : Intron | 1 | SNP | G | A | A | A | A | A/G | ||||||||||||
| rs27242125 MPD | dbSNP | MGI SNP Detail | Chr2:131738680 | f | Prnp : Intron | 1 | SNP | G | G | G | G | A | G | G | G | G | G | G | G | G | A/G | ||||
| rs27242124 MPD | dbSNP | MGI SNP Detail | Chr2:131738969 | f | Prnp : Intron | 1 | SNP | C | C | C | C | A | C | C | C | C | C | C | C | C | A/C | ||||
| rs27242123 MPD | dbSNP | MGI SNP Detail | Chr2:131739321 | f | Prnp : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | G | G | A/G | ||||
| rs27242122 MPD | dbSNP | MGI SNP Detail | Chr2:131740370 | f | Prnp : Intron | 1 | SNP | G | G | G | G | A | G | G | G | G | G | G | G | G | A/G | ||||
| rs27242121 MPD | dbSNP | MGI SNP Detail | Chr2:131740464 | f | Prnp : Intron | 1 | SNP | G | G | G | G | A | G | G | G | G | G | G | G | G | A/G | ||||
| rs27242120 MPD | dbSNP | MGI SNP Detail | Chr2:131740633 | f | Prnp : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | C | C | C/T | ||||
| rs27242119 MPD | dbSNP | MGI SNP Detail | Chr2:131740681 | f | Prnp : Intron | 1 | SNP | T | T | T | T | C | T | T | T | T | T | T | T | T | C/T | ||||
| rs27242118 MPD | dbSNP | MGI SNP Detail | Chr2:131740971 | f | Prnp : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | C | T | C/T | |||||
| rs27242117 MPD | dbSNP | MGI SNP Detail | Chr2:131741493 | f | Prnp : Intron | 1 | SNP | C | C | C | C | T | C | C | C | C | C | C | C | C | C/T | ||||
| rs27242116 MPD | dbSNP | MGI SNP Detail | Chr2:131741616 | f | Prnp : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | T | T | C/T | ||||
| rs27242115 MPD | dbSNP | MGI SNP Detail | Chr2:131741670 | f | Prnp : Intron | 1 | SNP | T | T | T | T | C | T | T | T | T | T | T | C | C | C/T | ||||
| rs27242114 MPD | dbSNP | MGI SNP Detail | Chr2:131741710 | f | Prnp : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | T | T | C/T | ||||
| rs27242113 MPD | dbSNP | MGI SNP Detail | Chr2:131741862 | f | Prnp : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | T | C/T | |||||
| rs27242112 MPD | dbSNP | MGI SNP Detail | Chr2:131741872 | f | Prnp : Intron | 1 | SNP | T | T | T | T | A | T | T | T | T | T | T | A | A | A/T | ||||
| rs27242111 MPD | dbSNP | MGI SNP Detail | Chr2:131741977 | f | Prnp : Intron | 1 | SNP | C | C | C | C | G | C | C | C | C | C | C | C | C | C/G | ||||
| rs27242110 MPD | dbSNP | MGI SNP Detail | Chr2:131742108 | f | Prnp : Intron | 1 | SNP | C | C | C | C | T | C | C | T | C | C | C | C | C | C/T | ||||
| rs27242109 MPD | dbSNP | MGI SNP Detail | Chr2:131742817 | f | Prnp : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | A | A | A/G | ||||
| rs27242108 MPD | dbSNP | MGI SNP Detail | Chr2:131742835 | f | Prnp : Intron | 1 | SNP | A | A | A | A | T | A | A | A | A | A | A | T | T | A/T | ||||
| rs27242107 MPD | dbSNP | MGI SNP Detail | Chr2:131742872 | f | Prnp : Intron | 1 | SNP | A | A | A | A | G | A | A | A | A | A | A | G | G | A/G | ||||
| rs27242106 MPD | dbSNP | MGI SNP Detail | Chr2:131742971 | f | Prnp : Intron | 1 | SNP | T | T | T | T | C | T | T | T | T | T | T | T | T | C/T | ||||
| rs27242105 MPD | dbSNP | MGI SNP Detail | Chr2:131743025 | f | Prnp : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | T | T | A/T | ||||
| rs27242104 MPD | dbSNP | MGI SNP Detail | Chr2:131743109 | f | Prnp : Intron | 1 | SNP | G | G | G | G | G | G | G | G | T | G | G | G | G | G/T | ||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs27242103 MPD | dbSNP | MGI SNP Detail | Chr2:131757101 | f | Prnp : Intron | 1 | SNP | T | G | T | T | T | G/T | ||||||||||||
| rs27242102 MPD | dbSNP | MGI SNP Detail | Chr2:131757225 | f | Prnp : Intron | 1 | SNP | G | G | A | A | A/G | |||||||||||||
| rs27242101 MPD | dbSNP | MGI SNP Detail | Chr2:131757248 | f | Prnp : Intron | 1 | SNP | T | T | C | T | T | T | C/T | |||||||||||
| rs27242100 MPD | dbSNP | MGI SNP Detail | Chr2:131757594 | f | Prnp : Intron | 1 | SNP | A | A | C | A | A | A/C | ||||||||||||
| rs27242099 MPD | dbSNP | MGI SNP Detail | Chr2:131757623 | f | Prnp : Intron | 1 | SNP | A | G | A | A | A/G | |||||||||||||
| rs27242098 MPD | dbSNP | MGI SNP Detail | Chr2:131757629 | f | Prnp : Intron | 1 | SNP | A | G | A | A | A/G | |||||||||||||
| rs27242097 MPD | dbSNP | MGI SNP Detail | Chr2:131757760 | f | Prnp : Intron | 1 | SNP | A | G | A | A | A/G | |||||||||||||
| rs27242096 MPD | dbSNP | MGI SNP Detail | Chr2:131757843 | f | Prnp : Intron | 1 | SNP | T | T | T | A | T | T | A/T | |||||||||||
| rs27242095 MPD | dbSNP | MGI SNP Detail | Chr2:131757986 | f | Prnp : Intron | 1 | SNP | C | C | C | T | C | C | C | C/T | ||||||||||
| rs27242094 MPD | dbSNP | MGI SNP Detail | Chr2:131758007 | f | Prnp : Intron | 1 | SNP | A | A | A | T | A | A | A | A | A/T | |||||||||
| rs27242093 MPD | dbSNP | MGI SNP Detail | Chr2:131758149 | f | Prnp : Intron | 1 | SNP | C | C | T | T | T | T | C/T | |||||||||||
| rs27242092 MPD | dbSNP | MGI SNP Detail | Chr2:131758865 | f | Prnp : Intron | 1 | SNP | G | T | T | T | G/T | |||||||||||||
| rs27242091 MPD | dbSNP | MGI SNP Detail | Chr2:131759272 | f | Prnp : Intron | 1 | SNP | T | T | C | T | C/T | |||||||||||||
| rs27242090 MPD | dbSNP | MGI SNP Detail | Chr2:131759349 | f | Prnp : Intron | 1 | SNP | G | A | G | G | A/G | |||||||||||||
| rs27242089 MPD | dbSNP | MGI SNP Detail | Chr2:131759436 | f | Prnp : Intron | 1 | SNP | T | T | T | C | T | T | T | T | T | C/T | ||||||||
| rs27242088 MPD | dbSNP | MGI SNP Detail | Chr2:131760851 | f | Prnp : Intron | 1 | SNP | T | G | T | T | G/T | |||||||||||||
| rs27242087 MPD | dbSNP | MGI SNP Detail | Chr2:131760893 | f | Prnp : Intron | 1 | SNP | C | C | C | C | T | C | C | C/T | ||||||||||
| rs27242086 MPD | dbSNP | MGI SNP Detail | Chr2:131761756 | f | Prnp : Intron | 1 | SNP | G | G | A | G | G | G | G | G | A/G | |||||||||
| rs27242085 MPD | dbSNP | MGI SNP Detail | Chr2:131761823 | f | Prnp : Intron | 1 | SNP | C | C | C | A | A | A/C | ||||||||||||
| rs27242084 MPD | dbSNP | MGI SNP Detail | Chr2:131762657 | f | Prnp : Coding-Synonymous | 1 | SNP | A | A | A | G | A | A | A | A | A | A/G | ||||||||
| rs6325757 MPD | dbSNP | MGI SNP Detail | Chr2:131763371 | f | Prnp : mRNA-UTR | 1 | SNP | A | G | A/G | |||||||||||||||
| rs27242083 MPD | dbSNP | MGI SNP Detail | Chr2:131763859 | f | Prnp : mRNA-UTR | 1 | SNP | C | T | T | T | C/T | |||||||||||||
| rs13474336 MPD | dbSNP | MGI SNP Detail | Chr2:131763936 | f | Prnp : mRNA-UTR | 1 | SNP | G | G | G | A | A/G |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 06/05/2013 MGI 5.13 |
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