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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Apoa4 apolipoprotein A-IV MGI:88051 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs30328748 MPD | dbSNP | MGI SNP Detail | Chr9:46047110 | f | Apoa4 : Locus-Region | 2 | SNP | C | A | A | A | A | A | A | A | A | C | A | A | C | A | C | A | A/C | |
| rs30529060 MPD | dbSNP | MGI SNP Detail | Chr9:46047168 | f | Apoa4 : Locus-Region | 2 | SNP | C | C | T | T | T | T | T | T | T | T | C | T | T | C | T | C | T | C/T |
| rs32679872 MPD | dbSNP | MGI SNP Detail | Chr9:46047317 | f | Apoa4 : Locus-Region | 1 | SNP | C | C | C | T | C | C | C | C | C | C | C | C | C/T | |||||
| rs30126109 MPD | dbSNP | MGI SNP Detail | Chr9:46047358 | f | Apoa4 : Locus-Region | 1 | SNP | T | T | A | A | A | A/T | ||||||||||||
| rs30429204 MPD | dbSNP | MGI SNP Detail | Chr9:46047468 | f | Apoa4 : Locus-Region | 1 | SNP | C | C | T | T | T | C/T | ||||||||||||
| rs30184070 MPD | dbSNP | MGI SNP Detail | Chr9:46047471 | f | Apoa4 : Locus-Region | 1 | SNP | G | G | A | A | A | A/G | ||||||||||||
| rs30423271 MPD | dbSNP | MGI SNP Detail | Chr9:46047657 | f | Apoa4 : Locus-Region | 1 | SNP | C | C | T | T | T | C/T | ||||||||||||
| rs30186537 MPD | dbSNP | MGI SNP Detail | Chr9:46047784 | f | Apoa4 : Locus-Region | 1 | SNP | C | C | T | C | T | C/T | ||||||||||||
| rs29689106 MPD | dbSNP | MGI SNP Detail | Chr9:46047842 | f | Apoa4 : Locus-Region | 2 | SNP | G | A | A | A | A | A | A | A | G | A | G | A | G | A | A/G | |||
| rs30371318 MPD | dbSNP | MGI SNP Detail | Chr9:46047895 | f | Apoa4 : Locus-Region | 2 | SNP | A | T | T | T | T | A | T | T | A | T | T | A | T | A | T | A/T | ||
| rs32680846 MPD | dbSNP | MGI SNP Detail | Chr9:46047982 | f | Apoa4 : Locus-Region | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | ||
| rs32680848 MPD | dbSNP | MGI SNP Detail | Chr9:46048070 | f | Apoa4 : Locus-Region | 2 | SNP | C | C | T | T | T | T | T | T | T | T | C | T | T | C | T | C | T | C/T |
| rs29597729 MPD | dbSNP | MGI SNP Detail | Chr9:46048098 | f | Apoa4 : Locus-Region | 2 | SNP | T | T | C | T | C | T | T | C | T | C | T | T | T | T | T | C/T | ||
| rs32680851 MPD | dbSNP | MGI SNP Detail | Chr9:46048387 | f | Apoa4 : Locus-Region | 1 | SNP | A | G | G | G | G | G | G | G | A | G | G | A | G | A | G | A/G | ||
| rs32680853 MPD | dbSNP | MGI SNP Detail | Chr9:46048433 | f | Apoa4 : Locus-Region | 1 | SNP | G | A | A | A | A | G | A | A | G | A | A | G | A | G | A | A/G | ||
| rs32681695 MPD | dbSNP | MGI SNP Detail | Chr9:46048574 | f | Apoa4 : Locus-Region | 1 | SNP | C | C | C | C | C | A | C | C | C | C | C | C | C | C | C | A/C | ||
| rs32681697 MPD | dbSNP | MGI SNP Detail | Chr9:46048645 | f | Apoa4 : Locus-Region | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | ||
| rs30433605 MPD | dbSNP | MGI SNP Detail | Chr9:46049165 | f | Apoa4 : mRNA-UTR | 2 | SNP | A | A | T | T | T | T | T | T | T | A | T | A | T | A | T | A/T | ||
| rs32674824 MPD | dbSNP | MGI SNP Detail | Chr9:46049356 | f | Apoa4 : Intron | 1 | SNP | T | C | C | C | C | C | T | C | C | T | C | T | C | C/T | ||||
| rs32674826 MPD | dbSNP | MGI SNP Detail | Chr9:46049638 | f | Apoa4 : Coding-NonSynonymous | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | C/T | ||
| rs32674828 MPD | dbSNP | MGI SNP Detail | Chr9:46049706 | f | Apoa4 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | ||
| rs32674830 MPD | dbSNP | MGI SNP Detail | Chr9:46049904 | f | Apoa4 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A/G | ||
| rs32674832 MPD | dbSNP | MGI SNP Detail | Chr9:46050308 | f | Apoa4 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | ||
| rs32675574 MPD | dbSNP | MGI SNP Detail | Chr9:46050404 | f | Apoa4 : Coding-Synonymous | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | C/T | ||
| rs32675576 MPD | dbSNP | MGI SNP Detail | Chr9:46050684 | f | Apoa4 : Coding-NonSynonymous | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | A | T | A | A/T | ||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs29927855 MPD | dbSNP | MGI SNP Detail | Chr9:46050956 | f | Apoa4 : Coding-Synonymous | 2 | SNP | T | T | C | C | C | C | C | T | C | C | T | C | C | T | C | C | C | C/T |
| rs32675579 MPD | dbSNP | MGI SNP Detail | Chr9:46051053 | f | Apoa4 : Coding-NonSynonymous | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | ||
| rs32675581 MPD | dbSNP | MGI SNP Detail | Chr9:46051502 | f | Apoa4 : mRNA-UTR | 1 | SNP | T | A | A | A | A | T | A | A | T | A | A | T | A | T | A | A/T | ||
| rs30382649 MPD | dbSNP | MGI SNP Detail | Chr9:46051582 | f | Apoa4 : Locus-Region | 1 | SNP | G | A | A | A | A/G | |||||||||||||
| rs32675583 MPD | dbSNP | MGI SNP Detail | Chr9:46051694 | f | Apoa4 : Locus-Region | 1 | SNP | T | C | C | C | C | C | C | C | T | C | T | C | C | C/T | ||||
| rs32676375 MPD | dbSNP | MGI SNP Detail | Chr9:46051841 | f | Apoa4 : Locus-Region | 1 | SNP | T | G | G | G | G | G | G | G | T | G | G | T | G | T | G | G/T | ||
| rs32676377 MPD | dbSNP | MGI SNP Detail | Chr9:46052011 | f | Apoa4 : Locus-Region | 2 | SNP | T | T | C | C | C | C | C | C | C | C | T | C | C | T | C | T | C | C/T |
| rs30278038 MPD | dbSNP | MGI SNP Detail | Chr9:46052025 | f | Apoa4 : Locus-Region | 2 | SNP | A | A | G | G | G | G | G | G | G | G | A | G | G | A | G | G | G | A/G |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 05/08/2013 MGI 5.13 |
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