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Mouse SNPs
Query Results -- Summary
 Symbol
Name
ID
Apoa4
apolipoprotein A-IV
MGI:88051

43 matching SNPs displayed
Full result set is also available in a tab-delimited format.


Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs30328748
MPD | dbSNP | MGI SNP Detail
Chr9:46239027fApoa4 : Locus-Region3SNP CAAAAAAAACA AC ACAA/C
rs30529060
MPD | dbSNP | MGI SNP Detail
Chr9:46239085fApoa4 : Locus-Region3SNPCCTTTTTTTTCT TC TCTC/T
rs32679872
MPD | dbSNP | MGI SNP Detail
Chr9:46239234fApoa4 : Locus-Region1SNPC CC   TCCCC CC CC C/T
rs30126109
MPD | dbSNP | MGI SNP Detail
Chr9:46239275fApoa4 : Locus-Region2SNPTTA   A A          A/T
rs30429204
MPD | dbSNP | MGI SNP Detail
Chr9:46239385fApoa4 : Locus-Region2SNPCCT   T T          C/T
rs30184070
MPD | dbSNP | MGI SNP Detail
Chr9:46239388fApoa4 : Locus-Region2SNPGGA   A A          A/G
rs30423271
MPD | dbSNP | MGI SNP Detail
Chr9:46239574fApoa4 : Locus-Region2SNPCCT   T T          C/T
rs30186537
MPD | dbSNP | MGI SNP Detail
Chr9:46239701fApoa4 : Locus-Region3SNPCCT   C T   C  T   C/T
rs29689106
MPD | dbSNP | MGI SNP Detail
Chr9:46239759fApoa4 : Locus-Region3SNPG AAAA AAAG  AG AGAA/G
rs30371318
MPD | dbSNP | MGI SNP Detail
Chr9:46239812fApoa4 : Locus-Region3SNPAATTTT ATTAT TA TATA/T
rs32680846
MPD | dbSNP | MGI SNP Detail
Chr9:46239899fApoa4 : Locus-Region1SNPG GGGG AGGGG GG GGGA/G
rs32680848
MPD | dbSNP | MGI SNP Detail
Chr9:46239987fApoa4 : Locus-Region2SNPCCTTTTTTTTCT TC TCTC/T
rs29597729
MPD | dbSNP | MGI SNP Detail
Chr9:46240015fApoa4 : Locus-Region3SNPTTCT CTTC TC TT TTTC/T
rs32680851
MPD | dbSNP | MGI SNP Detail
Chr9:46240304fApoa4 : Locus-Region1SNPA GGGG GGGAG GA GAGA/G
rs32680853
MPD | dbSNP | MGI SNP Detail
Chr9:46240350fApoa4 : Locus-Region1SNPG AAAA GAAGA AG AGAA/G
rs32681695
MPD | dbSNP | MGI SNP Detail
Chr9:46240491fApoa4 : Locus-Region1SNPC CCCC ACCCC CC CCCA/C
rs32681697
MPD | dbSNP | MGI SNP Detail
Chr9:46240562fApoa4 : Locus-Region1SNPG GGGG AGGGG GG GGGA/G
rs30433605
MPD | dbSNP | MGI SNP Detail
Chr9:46241082fApoa4 : mRNA-UTR3SNPAATTTTTTT A  TA TATA/T
rs32674824
MPD | dbSNP | MGI SNP Detail
Chr9:46241273fApoa4 : Intron1SNPT CC C  CCTC CT CTCC/T
rs32674826
MPD | dbSNP | MGI SNP Detail
Chr9:46241555fApoa4 : Coding-NonSynonymous1SNPT TTTT CTTTT TT TTTC/T
rs32674828
MPD | dbSNP | MGI SNP Detail
Chr9:46241623fApoa4 : Intron1SNPC CCCC TCCCC CC CCCC/T
rs32674830
MPD | dbSNP | MGI SNP Detail
Chr9:46241821fApoa4 : Intron1SNPA AAAA GAAAA AA AAAA/G
rs32674832
MPD | dbSNP | MGI SNP Detail
Chr9:46242225fApoa4 : Intron1SNPG GGGG AGGGG GG GGGA/G
rs32675574
MPD | dbSNP | MGI SNP Detail
Chr9:46242321fApoa4 : Coding-Synonymous1SNPT TTTT CTTTT TT TTTC/T
rs32675576
MPD | dbSNP | MGI SNP Detail
Chr9:46242601fApoa4 : Coding-NonSynonymous1SNPA AAAA AAAAA AA ATAA/T
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs29927855
MPD | dbSNP | MGI SNP Detail
Chr9:46242873fApoa4 : Coding-Synonymous
Gm10680 : within coordinates of
2SNPTTCCCCCTCCTC CT CCCC/T
rs32675579
MPD | dbSNP | MGI SNP Detail
Chr9:46242970fApoa4 : Coding-NonSynonymous
Gm10680 : within coordinates of
1SNPG GGGG AGGGG GG GGGA/G
rs32675581
MPD | dbSNP | MGI SNP Detail
Chr9:46243419fApoa4 : mRNA-UTR
Gm10680 : within coordinates of
2SNPTTAAAA TAATA AT ATAA/T
rs30382649
MPD | dbSNP | MGI SNP Detail
Chr9:46243499fApoa4 : Locus-Region
Gm10680 : within coordinates of
2SNP GA   A A          A/G
rs32675583
MPD | dbSNP | MGI SNP Detail
Chr9:46243611fApoa4 : Locus-Region2SNPTTCCCC CCCTC  T  CCC/T
rs32676375
MPD | dbSNP | MGI SNP Detail
Chr9:46243758fApoa4 : Locus-Region1SNPT GGGG GGGTG GT GTGG/T
rs32676377
MPD | dbSNP | MGI SNP Detail
Chr9:46243928fApoa4 : Locus-Region3SNPTTCCCCCCCCTC CT CTCC/T
rs30278038
MPD | dbSNP | MGI SNP Detail
Chr9:46243942fApoa4 : Locus-Region3SNPAAGGGGGGGGAG GA GGGA/G
rs32676380
MPD | dbSNP | MGI SNP Detail
Chr9:46244012fApoa4 : 553 bp downstream of1SNPG GGGG AGGGG GG GGGA/G
rs32676382
MPD | dbSNP | MGI SNP Detail
Chr9:46244568fApoa4 : 1109 bp downstream of1SNPT TTTT CTTTT TT TTTC/T
rs32677294
MPD | dbSNP | MGI SNP Detail
Chr9:46244933fApoa4 : 1474 bp downstream of1SNPT TTTT TTTTT TT TCTC/T
rs32677296
MPD | dbSNP | MGI SNP Detail
Chr9:46245133fApoa4 : 1674 bp downstream of1SNPC CACC CCCCC AC CCAA/C
rs29689921
MPD | dbSNP | MGI SNP Detail
Chr9:46245159fApoa4 : 1700 bp downstream of1SNP GC   C            C/G
rs32677298
MPD | dbSNP | MGI SNP Detail
Chr9:46245276fApoa4 : 1817 bp downstream of1SNPG GGGG TGGGG GG GGGG/T
rs52248309
MPD | dbSNP | MGI SNP Detail
Chr9:46245326fApoa4 : 1867 bp downstream of1SNP AG                A/G
rs52497678
MPD | dbSNP | MGI SNP Detail
Chr9:46245357fApoa4 : 1898 bp downstream of1SNP CT                C/T
rs52347698
MPD | dbSNP | MGI SNP Detail
Chr9:46245369fApoa4 : 1910 bp downstream of1SNP CT                C/T
rs52315679
MPD | dbSNP | MGI SNP Detail
Chr9:46245377fApoa4 : 1918 bp downstream of1SNP CT                C/T

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory