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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Psen2 presenilin 2 MGI:109284 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs32609333 MPD | dbSNP | MGI SNP Detail | Chr1:182155156 | f | Psen2 : Locus-Region | 2 | SNP | C | C | C | C | C | C | T | C | C | C | C | C | C | C/T | ||||
| rs32292400 MPD | dbSNP | MGI SNP Detail | Chr1:182155286 | f | Psen2 : Locus-Region | 1 | SNP | C | C | A | A/C | ||||||||||||||
| rs32122287 MPD | dbSNP | MGI SNP Detail | Chr1:182155305 | f | Psen2 : Locus-Region | 1 | SNP | C | C | A | A/C | ||||||||||||||
| rs32684030 MPD | dbSNP | MGI SNP Detail | Chr1:182155477 | f | Psen2 : Locus-Region | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | T | C/T | ||||
| rs32684032 MPD | dbSNP | MGI SNP Detail | Chr1:182155879 | f | Psen2 : Locus-Region | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | A | A/G | ||||
| rs31623430 MPD | dbSNP | MGI SNP Detail | Chr1:182155889 | f | Psen2 : Locus-Region | 1 | SNP | T | C | C/T | |||||||||||||||
| rs30470746 MPD | dbSNP | MGI SNP Detail | Chr1:182156040 | f | Psen2 : Locus-Region | 1 | SNP | C | T | C/T | |||||||||||||||
| rs31844840 MPD | dbSNP | MGI SNP Detail | Chr1:182156563 | f | Psen2 : Locus-Region | 1 | SNP | A | G | A | A | A/G | |||||||||||||
| rs32259914 MPD | dbSNP | MGI SNP Detail | Chr1:182156610 | f | Psen2 : Locus-Region | 1 | SNP | T | G | T | G | G/T | |||||||||||||
| rs30984606 MPD | dbSNP | MGI SNP Detail | Chr1:182156846 | f | Psen2 : Locus-Region | 2 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | C | T | T | C/T | |
| rs32685017 MPD | dbSNP | MGI SNP Detail | Chr1:182156970 | f | Psen2 : Locus-Region | 2 | SNP | T | T | C | T | T | T | C | T | T | T | T | T | C | C | C/T | |||
| rs32553311 MPD | dbSNP | MGI SNP Detail | Chr1:182157096 | f | Psen2 : Locus-Region | 1 | SNP | T | C | C | C/T | ||||||||||||||
| rs32685020 MPD | dbSNP | MGI SNP Detail | Chr1:182157683 | f | Psen2 : mRNA-UTR | 1 | SNP | G | G | G | G | G | T | G | G | G | G | T | T | G/T | |||||
| rs31651455 MPD | dbSNP | MGI SNP Detail | Chr1:182158323 | f | Psen2 : Intron | 2 | SNP | C | C | C | C | C | C | T | C | C | C | C | C | T | T | C/T | |||
| rs32435302 MPD | dbSNP | MGI SNP Detail | Chr1:182158416 | f | Psen2 : Intron | 1 | SNP | A | G | A | A/G | ||||||||||||||
| rs32552715 MPD | dbSNP | MGI SNP Detail | Chr1:182159621 | f | Psen2 : Intron | 1 | SNP | A | G | A | G | A/G | |||||||||||||
| rs32378604 MPD | dbSNP | MGI SNP Detail | Chr1:182159624 | f | Psen2 : Intron | 1 | SNP | T | C | T | C | C/T | |||||||||||||
| rs31763341 MPD | dbSNP | MGI SNP Detail | Chr1:182160151 | f | Psen2 : Intron | 1 | SNP | A | C | A | C | A/C | |||||||||||||
| rs32685775 MPD | dbSNP | MGI SNP Detail | Chr1:182160526 | f | Psen2 : Intron | 1 | SNP | T | T | T | C | T | T | T | C | C/T | |||||||||
| rs31344197 MPD | dbSNP | MGI SNP Detail | Chr1:182161134 | f | Psen2 : Intron | 1 | SNP | T | C | T | C/T | ||||||||||||||
| rs31548221 MPD | dbSNP | MGI SNP Detail | Chr1:182161215 | f | Psen2 : Intron | 1 | SNP | A | G | A | G | A/G | |||||||||||||
| rs32570462 MPD | dbSNP | MGI SNP Detail | Chr1:182161388 | f | Psen2 : Intron | 1 | SNP | A | A | A | G | A/G | |||||||||||||
| rs32685778 MPD | dbSNP | MGI SNP Detail | Chr1:182161665 | f | Psen2 : Intron | 1 | SNP | G | G | A | G | G | G | A | G | G | A | A | G | G | A/G | ||||
| rs30505573 MPD | dbSNP | MGI SNP Detail | Chr1:182161781 | f | Psen2 : Intron | 1 | SNP | C | C | T | C/T | ||||||||||||||
| rs31966860 MPD | dbSNP | MGI SNP Detail | Chr1:182162395 | f | Psen2 : Intron | 2 | SNP | G | G | G | G | G | G | G | A | G | G | G | G | G | A | G | A/G | ||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs32717699 MPD | dbSNP | MGI SNP Detail | Chr1:182162636 | f | Psen2 : Intron | 1 | SNP | C | T | C | C | C/T | |||||||||||||
| rs32685781 MPD | dbSNP | MGI SNP Detail | Chr1:182163056 | f | Psen2 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | T | A | A | A | A | A | A | A/T | ||
| rs32685783 MPD | dbSNP | MGI SNP Detail | Chr1:182163172 | f | Psen2 : Intron | 2 | SNP | A | G | A | A | A | A | G | G | A | G | A | A | A | A | G | G | A/G | |
| rs32686925 MPD | dbSNP | MGI SNP Detail | Chr1:182163204 | f | Psen2 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | ||
| rs32686927 MPD | dbSNP | MGI SNP Detail | Chr1:182163419 | f | Psen2 : Intron | 1 | SNP | T | C | C | T | T | C | C | C | C | T | T | C | C | C | C | C/T | ||
| rs32686929 MPD | dbSNP | MGI SNP Detail | Chr1:182163621 | f | Psen2 : Intron | 1 | SNP | A | A | A | A | A | A | A | G | A | A | A | A | A | A/G | ||||
| rs32686930 MPD | dbSNP | MGI SNP Detail | Chr1:182163658 | f | Psen2 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | C/T | ||
| rs32686932 MPD | dbSNP | MGI SNP Detail | Chr1:182163668 | f | Psen2 : Intron | 1 | SNP | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | |||
| rs31562572 MPD | dbSNP | MGI SNP Detail | Chr1:182163688 | f | Psen2 : Intron | 1 | SNP | C | T | C | C | C/T | |||||||||||||
| rs32688324 MPD | dbSNP | MGI SNP Detail | Chr1:182163830 | f | Psen2 : Coding-Synonymous | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | A/G | ||
| rs32688326 MPD | dbSNP | MGI SNP Detail | Chr1:182163932 | f | Psen2 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | C/T | ||
| rs32688329 MPD | dbSNP | MGI SNP Detail | Chr1:182163958 | f | Psen2 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | A | A | A/G | ||
| rs32688331 MPD | dbSNP | MGI SNP Detail | Chr1:182163991 | f | Psen2 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | T | T | C/T | ||
| rs32688333 MPD | dbSNP | MGI SNP Detail | Chr1:182164275 | f | Psen2 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A/G | ||
| rs32220633 MPD | dbSNP | MGI SNP Detail | Chr1:182164371 | f | Psen2 : Intron | 1 | SNP | C | T | T | C/T | ||||||||||||||
| rs32689166 MPD | dbSNP | MGI SNP Detail | Chr1:182165163 | f | Psen2 : Coding-Synonymous | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | ||
| rs32689169 MPD | dbSNP | MGI SNP Detail | Chr1:182165274 | f | Psen2 : Coding-Synonymous | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | ||
| rs32689172 MPD | dbSNP | MGI SNP Detail | Chr1:182165484 | f | Psen2 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A/G | ||
| rs32689855 MPD | dbSNP | MGI SNP Detail | Chr1:182165549 | f | Psen2 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A/G | ||
| rs32689857 MPD | dbSNP | MGI SNP Detail | Chr1:182165574 | f | Psen2 : Intron | 1 | SNP | C | T | C | C | C | T | T | C | T | C | C | C | C | T | T | C/T | ||
| rs32689859 MPD | dbSNP | MGI SNP Detail | Chr1:182165680 | f | Psen2 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C/T | ||
| rs32689862 MPD | dbSNP | MGI SNP Detail | Chr1:182165789 | f | Psen2 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | A | A | A/G | ||
| rs32690715 MPD | dbSNP | MGI SNP Detail | Chr1:182165917 | f | Psen2 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | C/T | ||
| rs32690718 MPD | dbSNP | MGI SNP Detail | Chr1:182165958 | f | Psen2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | A/G | ||
| rs31837949 MPD | dbSNP | MGI SNP Detail | Chr1:182166707 | f | Psen2 : Intron | 1 | SNP | T | C | T | C | C/T | |||||||||||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs32685945 MPD | dbSNP | MGI SNP Detail | Chr1:182166761 | f | Psen2 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | C | A | A | A | A | A | A | A/C | ||
| rs32685948 MPD | dbSNP | MGI SNP Detail | Chr1:182167050 | f | Psen2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | T | G | G | G | G | G | G | G/T | ||
| rs32685951 MPD | dbSNP | MGI SNP Detail | Chr1:182167198 | f | Psen2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | A/G | ||
| rs32686754 MPD | dbSNP | MGI SNP Detail | Chr1:182167299 | f | Psen2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | A/G | ||
| rs32686757 MPD | dbSNP | MGI SNP Detail | Chr1:182167431 | f | Psen2 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | A | G | G | G | G | G | G | A/G | ||
| rs32001496 MPD | dbSNP | MGI SNP Detail | Chr1:182167546 | f | Psen2 : Intron | 1 | SNP | C | A | C | A/C | ||||||||||||||
| rs32686759 MPD | dbSNP | MGI SNP Detail | Chr1:182167583 | f | Psen2 : Intron | 1 | SNP | T | T | T | T | T | T | T | A | T | T | T | A/T | ||||||
| rs32686761 MPD | dbSNP | MGI SNP Detail | Chr1:182167684 | f | Psen2 : Intron | 1 | SNP | G | G | G | G | G | G | G | A | G | G | G | G | G | G | A/G | |||
| rs32687464 MPD | dbSNP | MGI SNP Detail | Chr1:182167782 | f | Psen2 : Intron | 1 | SNP | A | A | A | A | A | C | A | A | A | A | A | A | A | A | A/C | |||
| rs32687467 MPD | dbSNP | MGI SNP Detail | Chr1:182167819 | f | Psen2 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A/G | ||
| rs32687470 MPD | dbSNP | MGI SNP Detail | Chr1:182168092 | f | Psen2 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | T | T | C/T | ||
| rs32687473 MPD | dbSNP | MGI SNP Detail | Chr1:182168162 | f | Psen2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | T | G | G | G | G | G | G | G/T | ||
| rs32688036 MPD | dbSNP | MGI SNP Detail | Chr1:182168213 | f | Psen2 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | C/T | ||
| rs31961746 MPD | dbSNP | MGI SNP Detail | Chr1:182168447 | f | Psen2 : Intron | 1 | SNP | C | T | C | C | C/T | |||||||||||||
| rs32688039 MPD | dbSNP | MGI SNP Detail | Chr1:182168587 | f | Psen2 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | C | A | A | A | A | A | A | A/C | ||
| rs32688042 MPD | dbSNP | MGI SNP Detail | Chr1:182168600 | f | Psen2 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | C | C | C/T | ||
| rs32688755 MPD | dbSNP | MGI SNP Detail | Chr1:182168918 | f | Psen2 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | C | T | C/T | ||
| rs32688758 MPD | dbSNP | MGI SNP Detail | Chr1:182169037 | f | Psen2 : Coding-Synonymous | 1 | SNP | G | A | G | G | G | G | G | G | G | G | G | G | G | G | G | A/G | ||
| rs32688760 MPD | dbSNP | MGI SNP Detail | Chr1:182169082 | f | Psen2 : Coding-Synonymous | 1 | SNP | A | C | A | A | A | C | C | A | A | A | A | A | A | C | A | A/C | ||
| rs32688763 MPD | dbSNP | MGI SNP Detail | Chr1:182169244 | f | Psen2 : Intron | 1 | SNP | G | A | G | G | G | A | G | G | A | G | G | G | G | G | G | A/G | ||
| rs32689516 MPD | dbSNP | MGI SNP Detail | Chr1:182169321 | f | Psen2 : Intron | 1 | SNP | C | T | C | C | C | T | C | C | T | C | C | C | C | C | C | C/T | ||
| rs32689519 MPD | dbSNP | MGI SNP Detail | Chr1:182169978 | f | Psen2 : Intron | 1 | SNP | C | C | C | C | T | C | C | T | C | C | C | C | C | T | C/T | |||
| rs32689521 MPD | dbSNP | MGI SNP Detail | Chr1:182170093 | f | Psen2 : Intron | 1 | SNP | C | T | C | C | C | T | C | C | T | C | C | C | C | C | T | C/T | ||
| rs32520209 MPD | dbSNP | MGI SNP Detail | Chr1:182170550 | f | Psen2 : Intron | 2 | SNP | A | G | A | A | A | A | G | A | G | A | A | A | A | G | G | A/G | ||
| rs32690434 MPD | dbSNP | MGI SNP Detail | Chr1:182170690 | f | Psen2 : Intron | 1 | SNP | T | C | T | T | T | C | T | C | T | T | T | T | C | C | C/T | |||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs32690437 MPD | dbSNP | MGI SNP Detail | Chr1:182170867 | f | Psen2 : Coding-Synonymous | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C/T | ||
| rs31052399 MPD | dbSNP | MGI SNP Detail | Chr1:182175601 | f | Psen2 : Intron | 1 | SNP | C | T | C | C/T |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 05/08/2013 MGI 5.13 |
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