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Mouse SNPs
Query Results -- Summary
 Symbol
Name
ID
Slc3a1
solute carrier family 3, member 1
MGI:1195264

84 matching SNPs displayed
Full result set is also available in a tab-delimited format.


Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs4231717
MPD | dbSNP | MGI SNP Detail
Chr17:85028454fSlc3a1 : Coding-NonSynonymous1SNP  G GGG  A G        G G                     A/G
rs52117434
MPD | dbSNP | MGI SNP Detail
Chr17:85033707fSlc3a1 : Intron1SNP TT                                         T
rs52383996
MPD | dbSNP | MGI SNP Detail
Chr17:85033731fSlc3a1 : Intron1SNP TT        C                                C/T
rs108317594
MPD | dbSNP | MGI SNP Detail
Chr17:85034028fSlc3a1 : Intron1SNP CC        C                         G      C/G
rs108072239
MPD | dbSNP | MGI SNP Detail
Chr17:85034232fSlc3a1 : Intron1SNP CC        C                         T      C/T
rs108609743
MPD | dbSNP | MGI SNP Detail
Chr17:85034310fSlc3a1 : Intron1SNP GG        G                         A      A/G
rs108507522
MPD | dbSNP | MGI SNP Detail
Chr17:85034337fSlc3a1 : Intron1SNP CC        C                         T      C/T
rs50208888
MPD | dbSNP | MGI SNP Detail
Chr17:85034477fSlc3a1 : Intron1SNP CC        C                         T      C/T
rs50935722
MPD | dbSNP | MGI SNP Detail
Chr17:85034659fSlc3a1 : Intron1SNP TT        T                         A      A/T
rs45815874
MPD | dbSNP | MGI SNP Detail
Chr17:85034716fSlc3a1 : Intron1SNP T         T                         G      G/T
rs46672931
MPD | dbSNP | MGI SNP Detail
Chr17:85034842fSlc3a1 : Intron1SNP C         C                         A      A/C
rs49929354
MPD | dbSNP | MGI SNP Detail
Chr17:85034943fSlc3a1 : Intron1SNP C         C                         T      C/T
rs49313524
MPD | dbSNP | MGI SNP Detail
Chr17:85034973fSlc3a1 : Intron1SNP A         A                         G      A/G
rs48505786
MPD | dbSNP | MGI SNP Detail
Chr17:85035041fSlc3a1 : Intron1SNP AA        A                         G      A/G
rs107998333
MPD | dbSNP | MGI SNP Detail
Chr17:85035207fSlc3a1 : Intron1SNP                   T              C         C/T
rs264219871
MPD | dbSNP | MGI SNP Detail
Chr17:85039840fSlc3a1 : Intron1SNP                   T              C         C/T
rs33658496
MPD | dbSNP | MGI SNP Detail
Chr17:85043682fSlc3a1 : Intron3SNP TT   C    C       C              T         C/T
rs33066916
MPD | dbSNP | MGI SNP Detail
Chr17:85044115fSlc3a1 : Intron3SNPCCC   T    T       T              C         C/T
rs33694715
MPD | dbSNP | MGI SNP Detail
Chr17:85044385fSlc3a1 : Intron2SNPA A        G       G              A         A/G
rs224152201
MPD | dbSNP | MGI SNP Detail
Chr17:85044429fSlc3a1 : Intron1SNP                   T              C         C/T
rs243621901
MPD | dbSNP | MGI SNP Detail
Chr17:85045152fSlc3a1 : Intron1SNP                   T              C         C/T
rs108085742
MPD | dbSNP | MGI SNP Detail
Chr17:85045554fSlc3a1 : Intron1SNP                   A              G         A/G
rs108709593
MPD | dbSNP | MGI SNP Detail
Chr17:85045626fSlc3a1 : Intron1SNP                   A              G         A/G
rs258201056
MPD | dbSNP | MGI SNP Detail
Chr17:85045641fSlc3a1 : Intron1SNP                   G              A         A/G
rs218018400
MPD | dbSNP | MGI SNP Detail
Chr17:85045700fSlc3a1 : Intron1SNP                   A              T         A/T
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs243137641
MPD | dbSNP | MGI SNP Detail
Chr17:85045735fSlc3a1 : Intron1SNP                   T              G         G/T
rs243633091
MPD | dbSNP | MGI SNP Detail
Chr17:85046266fSlc3a1 : Intron1SNP                   A              G         A/G
rs212954691
MPD | dbSNP | MGI SNP Detail
Chr17:85046492fSlc3a1 : Intron1SNP                   A              G         A/G
rs33606281
MPD | dbSNP | MGI SNP Detail
Chr17:85046877fSlc3a1 : Intron3SNPGG    A    A       G              G         A/G
rs47695775
MPD | dbSNP | MGI SNP Detail
Chr17:85047098fSlc3a1 : Intron1SNP  T        T                         C      C/T
rs46123298
MPD | dbSNP | MGI SNP Detail
Chr17:85047145fSlc3a1 : Intron1SNP GG        G                         A      A/G
rs48444669
MPD | dbSNP | MGI SNP Detail
Chr17:85047173fSlc3a1 : Intron1SNP GG        G                         A      A/G
rs51254885
MPD | dbSNP | MGI SNP Detail
Chr17:85047267fSlc3a1 : Intron1SNP  G        G                         A      A/G
rs48564075
MPD | dbSNP | MGI SNP Detail
Chr17:85047355fSlc3a1 : Intron1SNP  G        G                         C      C/G
rs50805249
MPD | dbSNP | MGI SNP Detail
Chr17:85047444fSlc3a1 : Intron1SNP  C                                  A      A/C
rs51399194
MPD | dbSNP | MGI SNP Detail
Chr17:85047478fSlc3a1 : Intron1SNP CC                                  T      C/T
rs48394266
MPD | dbSNP | MGI SNP Detail
Chr17:85047496fSlc3a1 : Intron1SNP CC                                  T      C/T
rs46720218
MPD | dbSNP | MGI SNP Detail
Chr17:85047594fSlc3a1 : Intron1SNP AA                                  G      A/G
rs52589835
MPD | dbSNP | MGI SNP Detail
Chr17:85049422fSlc3a1 : Intron2SNP TT        C       C              T         C/T
rs52589306
MPD | dbSNP | MGI SNP Detail
Chr17:85049423fSlc3a1 : Intron2SNP TT        C       C              T         C/T
rs48788058
MPD | dbSNP | MGI SNP Detail
Chr17:85049504fSlc3a1 : Intron1SNP  T        C                                C/T
rs49716066
MPD | dbSNP | MGI SNP Detail
Chr17:85049526fSlc3a1 : Intron1SNP  A        G                                A/G
rs46327362
MPD | dbSNP | MGI SNP Detail
Chr17:85050464fSlc3a1 : Intron1SNP                   T              C         C/T
rs263968970
MPD | dbSNP | MGI SNP Detail
Chr17:85050494fSlc3a1 : Intron1SNP                   G              C         C/G
rs227212168
MPD | dbSNP | MGI SNP Detail
Chr17:85051245fSlc3a1 : Intron1SNP                   A              G         A/G
rs250757454
MPD | dbSNP | MGI SNP Detail
Chr17:85051336fSlc3a1 : Intron1SNP                   C              T         C/T
rs253572693
MPD | dbSNP | MGI SNP Detail
Chr17:85051447fSlc3a1 : Intron1SNP                   G              C         C/G
rs107656872
MPD | dbSNP | MGI SNP Detail
Chr17:85052640fSlc3a1 : Intron1SNP                   G              A         A/G
rs108379062
MPD | dbSNP | MGI SNP Detail
Chr17:85052995fSlc3a1 : Intron1SNP                   T              C         C/T
rs256057613
MPD | dbSNP | MGI SNP Detail
Chr17:85053802fSlc3a1 : Intron1SNP                   G              A         A/G
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs108301509
MPD | dbSNP | MGI SNP Detail
Chr17:85053894fSlc3a1 : Intron1SNP                   A              A         A
rs33564341
MPD | dbSNP | MGI SNP Detail
Chr17:85054896fSlc3a1 : Intron3SNP CC   T    T       C              C         C/T
rs6310136
MPD | dbSNP | MGI SNP Detail
Chr17:85055286fSlc3a1 : Intron2SNPG     A            G              G         A/G
rs6310150
MPD | dbSNP | MGI SNP Detail
Chr17:85055292fSlc3a1 : Intron2SNPC     T            C              C         C/T
rs6322977
MPD | dbSNP | MGI SNP Detail
Chr17:85055430fSlc3a1 : Intron2SNPT     C            T              T         C/T
rs52531807
MPD | dbSNP | MGI SNP Detail
Chr17:85055537fSlc3a1 : Intron2SNP  T                T              C         C/T
rs107777448
MPD | dbSNP | MGI SNP Detail
Chr17:85056596fSlc3a1 : Intron1SNP                   A              A         A
rs49526414
MPD | dbSNP | MGI SNP Detail
Chr17:85056751fSlc3a1 : Intron1SNP                   T              T         T
rs108353613
MPD | dbSNP | MGI SNP Detail
Chr17:85056788fSlc3a1 : Intron1SNP                   A              A         A
rs47559608
MPD | dbSNP | MGI SNP Detail
Chr17:85056931fSlc3a1 : Intron1SNP                   A              A         A
rs107610125
MPD | dbSNP | MGI SNP Detail
Chr17:85056977fSlc3a1 : Intron1SNP                   A              A         A
rs108542262
MPD | dbSNP | MGI SNP Detail
Chr17:85056979fSlc3a1 : Intron1SNP                   A              A         A
rs33295978
MPD | dbSNP | MGI SNP Detail
Chr17:85057143fSlc3a1 : Intron3SNP TT   G    G       T              T         G/T
rs51028779
MPD | dbSNP | MGI SNP Detail
Chr17:85057862fSlc3a1 : Intron2SNP GG                G              G         G
rs51272153
MPD | dbSNP | MGI SNP Detail
Chr17:85057879fSlc3a1 : Intron2SNP G                 G              G         G
rs45719897
MPD | dbSNP | MGI SNP Detail
Chr17:85058535fSlc3a1 : Intron2SNP  A        G       A              A         A/G
rs33663230
MPD | dbSNP | MGI SNP Detail
Chr17:85058910fSlc3a1 : Intron3SNPGGG   A    A       G              G         A/G
rs33549368
MPD | dbSNP | MGI SNP Detail
Chr17:85059606fSlc3a1 : Intron3SNP TT   G            T              G         G/T
rs33280755
MPD | dbSNP | MGI SNP Detail
Chr17:85059913fSlc3a1 : Intron3SNP CC   T    T       C              C         C/T
rs33284712
MPD | dbSNP | MGI SNP Detail
Chr17:85060103fSlc3a1 : Intron2SNP AA   G    G       A              A         A/G
rs33178132
MPD | dbSNP | MGI SNP Detail
Chr17:85060791fSlc3a1 : Intron3SNPTTT   C    C       T              T         C/T
rs29541955
MPD | dbSNP | MGI SNP Detail
Chr17:85060993fSlc3a1 : Intron3SNP GG   A    A       G              G         A/G
rs33693380
MPD | dbSNP | MGI SNP Detail
Chr17:85062675fSlc3a1 : Intron3SNP GG   A            G              G         A/G
rs47696528
MPD | dbSNP | MGI SNP Detail
Chr17:85063229fPrepl : Locus-Region
Slc3a1 : Intron
2SNP  A                A              A         A
rs46076032
MPD | dbSNP | MGI SNP Detail
Chr17:85063426fPrepl : Locus-Region
Slc3a1 : Intron
2SNP  G                G              G         G
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs50056339
MPD | dbSNP | MGI SNP Detail
Chr17:85063567fPrepl : mRNA-UTR
Slc3a1 : Intron
2SNP  T                T              T         T
rs13483140
MPD | dbSNP | MGI SNP Detail
Chr17:85063821fPrepl : mRNA-UTR
Slc3a1 : Coding-Synonymous
4SNPGGGGAGAGAAAAAAGGAGGG G AAAAAGGAAAGGGG GAAAGAA/G
rs33289585
MPD | dbSNP | MGI SNP Detail
Chr17:85064073fPrepl : mRNA-UTR
Slc3a1 : Coding-Synonymous
3SNP AA   G    G       A              A         A/G
rs33577999
MPD | dbSNP | MGI SNP Detail
Chr17:85064114fPrepl : mRNA-UTR
Slc3a1 : mRNA-UTR
3SNP GG   A    A       G              G         A/G
rs33695608
MPD | dbSNP | MGI SNP Detail
Chr17:85065251fPrepl : Intron
Slc3a1 : 1010 bp downstream of
3SNP CC   T    T       C              C         C/T
rs29498698
MPD | dbSNP | MGI SNP Detail
Chr17:85065557fPrepl : Intron
Slc3a1 : 1316 bp downstream of
3SNP TT   C    C       T              T         C/T
rs33596560
MPD | dbSNP | MGI SNP Detail
Chr17:85065574fPrepl : Intron
Slc3a1 : 1333 bp downstream of
3SNP CC   T    T       C              C         C/T
rs33374763
MPD | dbSNP | MGI SNP Detail
Chr17:85066045fPrepl : Intron
Slc3a1 : 1804 bp downstream of
3SNP CC        T       C              C         C/T
rs33415737
MPD | dbSNP | MGI SNP Detail
Chr17:85066125fPrepl : Intron
Slc3a1 : 1884 bp downstream of
2SNP CC        T       C              C         C/T

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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory